GR399605

EST Overview


Name	GR399605
Unique Name	GR399605
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	469

Libraries


Library Name	Type
LIBEST_024783 ICC4958 Slow drought stresses root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

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BLAST of GR399605 vs. TrEMBL
Match: B9RMC7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1079680 PE=4 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 7.231e-7
Identity = 28/37 (75.68%), Postives = 30/37 (81.08%), Query Frame = -3

Query:  357 EFGNMQTSGVSILVHTLIFSALTTIFLIPSGVHTNPG 467
            EFGNMQTSG+SILVHT+IF AL TIFLI  GVH   G
Sbjct:   33 EFGNMQTSGLSILVHTIIFFALVTIFLIAIGVHIYTG 69

The following BLAST results are available for this feature:

BLAST of GR399605 vs. TrEMBL

BLAST of GR399605 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 1


Match Name	E-value	Identity	Description
B9RMC7_RICCO	7.231e-7	75.68	Putative uncharacterized protein OS=Ricinus commun...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 59..72 score
None	No IPR available	SEG	seg	seg	coord: 13..20 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR399605 ID=GR399605; Name=GR399605; organism=Cicer arietinum; type=EST; length=469bp
GGATAGTGTTCCTTTAACTCATTCATAATTAGAAAGTCCCTAAACATTCG
TACTTAGAGTGATAACCCGTTCAAATAATAGGGGTGGGTTATGAGACCAT
AAAAAAATTAGGTAAACGTAAAATGGTGATTTTTTGAAGGAATGCCTTTG
TACCCGGTACGAAACCCACACGATTATCCCCCTTTAGAATGTCAAAGACT
CTTCTGAACGATGTGAAGACAAGTGACAGCGAATAATCCCTAAATAAGGA
GGAGAAGAAGAACAACTCTGATTGGAACCGCCCACTGAGTAAGAAAAAAA
CTTAGACCAAAACCATGGGGTAAAAGATCCGTAAGACTGGGTGATGTGAG
TAATTAACCCGGGTTGGTATGGACGCCACTTGGAATAAGAAATATAGTAG
TTAGTGCGGAAAATATGAGGGTATGAACCAAAATAGACACCCCACTTGTT
TGCATGTTCCCGAATTCCA

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