GR406114

EST Overview
NameGR406114
Unique NameGR406114
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length318
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR406114 vs. TrEMBL
Match: Q2PEQ5_TRIPR (Putative uncharacterized protein OS=Trifolium pratense PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 9.983e-17
Identity = 51/84 (60.71%), Postives = 54/84 (64.29%), Query Frame = 3
Query:   66 DFSNDDNSFPASGAPAHQGSAEEGDSGNPAEXXXXXXXXXXXXXXXXXXXXXXFSNGEAGEEGRPRRPFDRHSGTGRGSGFKRE 317
            DFSNDDNS PA   PA+QGS E GDSGNP+E                      FSNGEAGEEGRPRR FDRHSG+GRG GFKRE
Sbjct:   96 DFSNDDNSLPAP--PANQGSFE-GDSGNPSERRGYGAPRAPYRVGGERRRGG-FSNGEAGEEGRPRRTFDRHSGSGRGGGFKRE 175          
BLAST of GR406114 vs. TrEMBL
Match: Q2PEZ8_TRIPR (Putative nuclear antigen homolog OS=Trifolium pratense PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.719e-14
Identity = 43/84 (51.19%), Postives = 49/84 (58.33%), Query Frame = 3
Query:   66 DFSNDDNSFPASGAPAHQGSAEEGDSGNPAEXXXXXXXXXXXXXXXXXXXXXXFSNGEAGEEGRPRRPFDRHSGTGRGSGFKRE 317
            D+SN +NSFP SGAP + G  EEGD  +                         FSNGEAGEEGRPRR F+RHSGTGRG+ FKRE
Sbjct:  103 DYSNGENSFPGSGAPENHGPIEEGDKFSERRNYGGPRPPYRGGRRGG------FSNGEAGEEGRPRRTFERHSGTGRGNEFKRE 180          
BLAST of GR406114 vs. TrEMBL
Match: Q2PES2_TRIPR (Putative nuclear antigen homolog OS=Trifolium pratense PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.719e-14
Identity = 43/84 (51.19%), Postives = 49/84 (58.33%), Query Frame = 3
Query:   66 DFSNDDNSFPASGAPAHQGSAEEGDSGNPAEXXXXXXXXXXXXXXXXXXXXXXFSNGEAGEEGRPRRPFDRHSGTGRGSGFKRE 317
            D+SN +NSFP SGAP + G  EEGD  +                         FSNGEAGEEGRPRR F+RHSGTGRG+ FKRE
Sbjct:  103 DYSNGENSFPGSGAPENHGPIEEGDKFSERRNYGGPRPPYRGGRRGG------FSNGEAGEEGRPRRTFERHSGTGRGNEFKRE 180          
BLAST of GR406114 vs. TrEMBL
Match: O04237_VICFA (Transcription factor OS=Vicia faba var. minor PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.669e-12
Identity = 41/82 (50.00%), Postives = 45/82 (54.88%), Query Frame = 3
Query:   72 SNDDNSFPASGAPAHQGSAEEGDSGNPAEXXXXXXXXXXXXXXXXXXXXXXFSNGEAGEEGRPRRPFDRHSGTGRGSGFKRE 317
            SND+NSFPAS AP  QG+ E        E                      FSNGE GEEGRPRR F+RHSGTGRGS FKR+
Sbjct:  102 SNDENSFPASRAPDSQGAVE-------GEKFSERRGFGGPRPPYRGGRRGGFSNGEGGEEGRPRRAFERHSGTGRGSEFKRD 176          
BLAST of GR406114 vs. TrEMBL
Match: C6TH20_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.404e-12
Identity = 45/86 (52.33%), Postives = 50/86 (58.14%), Query Frame = 3
Query:   66 DFSNDDNSFPASGAPAHQGSAEEGDSGNPAEXXXXXXXXXXXXXXXXXXXXXXFSNGEAGE--EGRPRRPFDRHSGTGRGSGFKRE 317
            D SND+NSFP SGAP +Q S E GD+G  +E                      FSNGE GE  EGRPRR FDR SGTGRG+ FKRE
Sbjct:   94 DSSNDENSFPTSGAPYNQVSFE-GDAGKSSERRGYGGPRGPYRGGGGRRGG--FSNGETGEAEEGRPRRAFDRRSGTGRGNEFKRE 176          
BLAST of GR406114 vs. TrEMBL
Match: B9RCY9_RICCO (RNA binding protein, putative OS=Ricinus communis GN=RCOM_1607600 PE=4 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.063e-10
Identity = 36/82 (43.90%), Postives = 47/82 (57.32%), Query Frame = 3
Query:   72 SNDDNSFPASGAPAHQGSAEEGDSGNPAEXXXXXXXXXXXXXXXXXXXXXXFSNGEAGEEGRPRRPFDRHSGTGRGSGFKRE 317
            SN++NSF  +GAPA QG+ E+GD+G  +E                      F+NGE G+  RPRR F+R SGTG G+ FKRE
Sbjct:   99 SNNENSFSNTGAPAGQGAPEDGDAGKTSERRSYGGARGGYRGGRRGG----FANGEVGDGERPRRAFERRSGTGHGNEFKRE 176          
BLAST of GR406114 vs. TrEMBL
Match: D7SLZ5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_21.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00018290001 PE=4 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.930e-10
Identity = 35/84 (41.67%), Postives = 46/84 (54.76%), Query Frame = 3
Query:   66 DFSNDDNSFPASGAPAHQGSAEEGDSGNPAEXXXXXXXXXXXXXXXXXXXXXXFSNGEAGEEGRPRRPFDRHSGTGRGSGFKRE 317
            D++N++NSF   G    QG+ E+G+ G P+E                      FSNGEAG+  RPRR F+R SGTGRG+  KRE
Sbjct:   91 DYANNENSFSNMGVAGGQGAPEDGEGGKPSERRNYGGPRPPFRGRRGG-----FSNGEAGDGDRPRRAFERRSGTGRGNELKRE 169          
BLAST of GR406114 vs. TrEMBL
Match: B9GP69_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_830328 PE=4 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.182e-9
Identity = 36/84 (42.86%), Postives = 48/84 (57.14%), Query Frame = 3
Query:   66 DFSNDDNSFPASGAPAHQGSAEEGDSGNPAEXXXXXXXXXXXXXXXXXXXXXXFSNGEAGEEGRPRRPFDRHSGTGRGSGFKRE 317
            DF+N D+SF  +GAPA QG++E+GD+G  +E                      F+NGE GE  RPRR ++R SGTG G+  KRE
Sbjct:   93 DFNNIDSSFANTGAPATQGASEDGDAGKSSERRGYGGPRAASGFRGGRHGG--FANGEDGEGERPRRIYERRSGTGHGNEMKRE 174          
BLAST of GR406114 vs. TrEMBL
Match: A9PCV9_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.182e-9
Identity = 36/84 (42.86%), Postives = 48/84 (57.14%), Query Frame = 3
Query:   66 DFSNDDNSFPASGAPAHQGSAEEGDSGNPAEXXXXXXXXXXXXXXXXXXXXXXFSNGEAGEEGRPRRPFDRHSGTGRGSGFKRE 317
            DF+N D+SF  +GAPA QG++E+GD+G  +E                      F+NGE GE  RPRR ++R SGTG G+  KRE
Sbjct:   92 DFNNIDSSFANTGAPATQGASEDGDAGKSSERRGYGGPRAASGFRGGRHGG--FANGEDGEGERPRRIYERRSGTGHGNEMKRE 173          
BLAST of GR406114 vs. TrEMBL
Match: B9MV71_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1110119 PE=4 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.106e-7
Identity = 35/84 (41.67%), Postives = 44/84 (52.38%), Query Frame = 3
Query:   66 DFSNDDNSFPASGAPAHQGSAEEGDSGNPAEXXXXXXXXXXXXXXXXXXXXXXFSNGEAGEEGRPRRPFDRHSGTGRGSGFKRE 317
            DF+N+++SF  SGAP  QG+AE+GD+    E                      F N E GE  RPRR  +R SGTGRG+  KRE
Sbjct:   94 DFNNNESSFGNSGAPTVQGAAEDGDTAKTFESRGYGGPRGGGFRGGRRGG---FGNEEVGEGERPRRTNERWSGTGRGNEMKRE 174          
The following BLAST results are available for this feature:
BLAST of GR406114 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
Q2PEQ5_TRIPR9.983e-1760.71Putative uncharacterized protein OS=Trifolium prat... [more]
Q2PEZ8_TRIPR2.719e-1451.19Putative nuclear antigen homolog OS=Trifolium prat... [more]
Q2PES2_TRIPR2.719e-1451.19Putative nuclear antigen homolog OS=Trifolium prat... [more]
O04237_VICFA5.669e-1250.00Transcription factor OS=Vicia faba var. minor PE=2... [more]
C6TH20_SOYBN7.404e-1252.33Putative uncharacterized protein OS=Glycine max PE... [more]
B9RCY9_RICCO4.063e-1043.90RNA binding protein, putative OS=Ricinus communis ... [more]
D7SLZ5_VITVI6.930e-1041.67Whole genome shotgun sequence of line PN40024, sca... [more]
B9GP69_POPTR1.182e-942.86Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A9PCV9_POPTR1.182e-942.86Putative uncharacterized protein OS=Populus tricho... [more]
B9MV71_POPTR1.106e-741.67Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 1..22
score: NAcoord: 60..77
score
NoneNo IPR availableSEGsegsegcoord: 1..21
score: NAcoord: 53..74
score
NoneNo IPR availableSEGsegsegcoord: 25..46
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR406114 ID=GR406114; Name=GR406114; organism=Cicer arietinum; type=EST; length=318bp
CTTCTCGCGGTGGCCGTGGAGGTAGCCGTGGACGTGGATTTGGACGTGGT
CGCGGCTTCGGTCGTGATTTCTCCAATGATGATAACTCATTCCCTGCATC
TGGAGCCCCTGCTCATCAAGGTTCTGCCGAAGAAGGAGATTCTGGTAATC
CCGCTGAGAGACGTGGTTATGGAGCACCTCGTGGACCTTACCGCGGAGGT
GGTGGAGGCGGTCGACGTGGAGGCTTTAGCAATGGAGAAGCTGGTGAAGA
GGGACGTCCACGAAGACCTTTTGATCGCCACAGCGGGACTGGGCGCGGAA
GTGGATTCAAACGTGAAG
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