GR404853
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR404853 vs. TrEMBL
Match: B9H8Y4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_802381 PE=4 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.549e-12 Identity = 37/42 (88.10%), Postives = 40/42 (95.24%), Query Frame = 3 Query: 3 VQSLLPLHSAVSSARLTSCLGIDSRSSKSLSQGMLCSADPGV 128 +QSLLP HSAVSSARLTSCL IDSRSS+SLSQGMLCSA+PGV Sbjct: 52 IQSLLPFHSAVSSARLTSCLSIDSRSSRSLSQGMLCSANPGV 93
BLAST of GR404853 vs. TrEMBL
Match: Q9LYG7_ARATH (Putative uncharacterized protein T22P22_20 OS=Arabidopsis thaliana GN=T22P22_20 PE=4 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.922e-11 Identity = 34/42 (80.95%), Postives = 42/42 (100.00%), Query Frame = 3 Query: 3 VQSLLPLHSAVSSARLTSCLGIDSRSSKSLSQGMLCSADPGV 128 +QSLLPL+SAV+SARLTSCLGIDS++S+SL+QGMLCSA+PGV Sbjct: 52 LQSLLPLYSAVASARLTSCLGIDSQNSRSLAQGMLCSANPGV 93
BLAST of GR404853 vs. TrEMBL
Match: D7M4A6_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_909128 PE=4 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.922e-11 Identity = 34/42 (80.95%), Postives = 42/42 (100.00%), Query Frame = 3 Query: 3 VQSLLPLHSAVSSARLTSCLGIDSRSSKSLSQGMLCSADPGV 128 +QSLLPL+SAV+SARLTSCLGIDS++S+SL+QGMLCSA+PGV Sbjct: 52 LQSLLPLYSAVASARLTSCLGIDSQNSRSLAQGMLCSANPGV 93
BLAST of GR404853 vs. TrEMBL
Match: D7UEA8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_459.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00006992001 PE=4 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 8.798e-8 Identity = 28/42 (66.67%), Postives = 34/42 (80.95%), Query Frame = 3 Query: 3 VQSLLPLHSAVSSARLTSCLGIDSRSSKSLSQGMLCSADPGV 128 +QSLLPLHSAV++AR+TSCL SRS K+LSQG LC PG+ Sbjct: 67 IQSLLPLHSAVAAARMTSCLSSTSRSCKALSQGTLCRTSPGL 108
BLAST of GR404853 vs. TrEMBL
Match: D7U3N7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_229.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00004713001 PE=4 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 8.798e-8 Identity = 28/42 (66.67%), Postives = 34/42 (80.95%), Query Frame = 3 Query: 3 VQSLLPLHSAVSSARLTSCLGIDSRSSKSLSQGMLCSADPGV 128 +QSLLPLHSAV++AR+TSCL SRS K+LSQG LC PG+ Sbjct: 67 IQSLLPLHSAVAAARMTSCLSSTSRSCKALSQGTLCRTSPGL 108
BLAST of GR404853 vs. TrEMBL
Match: Q2A9S8_BRAOL (Putative uncharacterized protein OS=Brassica oleracea GN=25.t00029 PE=4 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 1.149e-7 Identity = 28/40 (70.00%), Postives = 33/40 (82.50%), Query Frame = 3 Query: 3 VQSLLPLHSAVSSARLTSCLGIDSRSSKSLSQGMLCSADP 122 VQSLLPLHS V++ARLTSCL + SRSS++LSQG LC P Sbjct: 68 VQSLLPLHSTVAAARLTSCLSVTSRSSRALSQGTLCCTSP 107
BLAST of GR404853 vs. TrEMBL
Match: Q949V8_ARATH (At4g17310 OS=Arabidopsis thaliana GN=At4g17310 PE=4 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 3.343e-7 Identity = 28/40 (70.00%), Postives = 32/40 (80.00%), Query Frame = 3 Query: 3 VQSLLPLHSAVSSARLTSCLGIDSRSSKSLSQGMLCSADP 122 VQSLLPLHS V++ARLTSCL SRSS++LSQG LC P Sbjct: 58 VQSLLPLHSTVAAARLTSCLSTTSRSSRALSQGTLCCTSP 97
BLAST of GR404853 vs. TrEMBL
Match: Q2A9N7_BRAOL (Putative uncharacterized protein OS=Brassica oleracea GN=26.t00030 PE=4 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 7.448e-7 Identity = 26/39 (66.67%), Postives = 32/39 (82.05%), Query Frame = 3 Query: 6 QSLLPLHSAVSSARLTSCLGIDSRSSKSLSQGMLCSADP 122 QSLLPLHS V++ARLTSCL + SR+S++LSQG LC P Sbjct: 68 QSLLPLHSTVAAARLTSCLSVTSRNSRALSQGTLCCTSP 106
BLAST of GR404853 vs. TrEMBL
Match: D7MC05_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_493145 PE=4 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 7.448e-7 Identity = 28/40 (70.00%), Postives = 32/40 (80.00%), Query Frame = 3 Query: 3 VQSLLPLHSAVSSARLTSCLGIDSRSSKSLSQGMLCSADP 122 VQSLLPLHS V++ARLTSCL SRSS++LSQG LC P Sbjct: 58 VQSLLPLHSTVAAARLTSCLSTTSRSSRALSQGTLCCTCP 97
BLAST of GR404853 vs. TrEMBL
Match: B9NCE1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_589737 PE=4 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 7.448e-7 Identity = 26/42 (61.90%), Postives = 34/42 (80.95%), Query Frame = 3 Query: 3 VQSLLPLHSAVSSARLTSCLGIDSRSSKSLSQGMLCSADPGV 128 VQSLLPLHSAV+++R+TSCL SR+ ++LSQG LC PG+ Sbjct: 69 VQSLLPLHSAVAASRMTSCLSTTSRNFRALSQGTLCCTSPGL 110
BLAST of GR404853 vs. TAIR peptide
Match: AT5G11630.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17310.1); Has 90 Blast hits to 90 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:3740545-3740909 FORWARD LENGTH=93) HSP 1 Score: 72.0182 bits (175), Expect = 2.359e-13 Identity = 34/42 (80.95%), Postives = 42/42 (100.00%), Query Frame = 3 Query: 3 VQSLLPLHSAVSSARLTSCLGIDSRSSKSLSQGMLCSADPGV 128 +QSLLPL+SAV+SARLTSCLGIDS++S+SL+QGMLCSA+PGV Sbjct: 52 LQSLLPLYSAVASARLTSCLGIDSQNSRSLAQGMLCSANPGV 93
BLAST of GR404853 vs. TAIR peptide
Match: AT4G17310.1 (| Symbols: | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47455.7); Has 164 Blast hits to 164 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:9686466-9686848 REVERSE LENGTH=99) HSP 1 Score: 58.5362 bits (140), Expect = 2.699e-9 Identity = 28/40 (70.00%), Postives = 32/40 (80.00%), Query Frame = 3 Query: 3 VQSLLPLHSAVSSARLTSCLGIDSRSSKSLSQGMLCSADP 122 VQSLLPLHS V++ARLTSCL SRSS++LSQG LC P Sbjct: 58 VQSLLPLHSTVAAARLTSCLSTTSRSSRALSQGTLCCTSP 97
BLAST of GR404853 vs. TAIR peptide
Match: AT5G11630.2 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17310.2); Has 82 Blast hits to 82 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:3740545-3741529 FORWARD LENGTH=91) HSP 1 Score: 52.7582 bits (125), Expect = 1.481e-7 Identity = 25/32 (78.12%), Postives = 32/32 (100.00%), Query Frame = 3 Query: 3 VQSLLPLHSAVSSARLTSCLGIDSRSSKSLSQ 98 +QSLLPL+SAV+SARLTSCLGIDS++S+SL+Q Sbjct: 52 LQSLLPLYSAVASARLTSCLGIDSQNSRSLAQ 83
BLAST of GR404853 vs. TAIR peptide
Match: AT5G47455.7 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17310.1); Has 147 Blast hits to 147 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 147; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:19250805-19251665 FORWARD LENGTH=100) HSP 1 Score: 50.447 bits (119), Expect = 7.350e-7 Identity = 24/33 (72.73%), Postives = 29/33 (87.88%), Query Frame = 3 Query: 3 VQSLLPLHSAVSSARLTSCLGIDSRSSKSLSQG 101 VQSLLPLHS V++ARLTSCL SRSS++L+QG Sbjct: 67 VQSLLPLHSTVAAARLTSCLSTTSRSSRALTQG 99
BLAST of GR404853 vs. TAIR peptide
Match: AT5G47455.6 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr5:19250805-19251665 FORWARD LENGTH=100) HSP 1 Score: 50.447 bits (119), Expect = 7.350e-7 Identity = 24/33 (72.73%), Postives = 29/33 (87.88%), Query Frame = 3 Query: 3 VQSLLPLHSAVSSARLTSCLGIDSRSSKSLSQG 101 VQSLLPLHS V++ARLTSCL SRSS++L+QG Sbjct: 67 VQSLLPLHSTVAAARLTSCLSTTSRSSRALTQG 99
BLAST of GR404853 vs. TAIR peptide
Match: AT5G47455.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17310.1); Has 147 Blast hits to 147 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 147; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:19250805-19251665 FORWARD LENGTH=100) HSP 1 Score: 50.447 bits (119), Expect = 7.350e-7 Identity = 24/33 (72.73%), Postives = 29/33 (87.88%), Query Frame = 3 Query: 3 VQSLLPLHSAVSSARLTSCLGIDSRSSKSLSQG 101 VQSLLPLHS V++ARLTSCL SRSS++L+QG Sbjct: 67 VQSLLPLHSTVAAARLTSCLSTTSRSSRALTQG 99 The following BLAST results are available for this feature:
BLAST of GR404853 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR404853 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 6
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR404853 ID=GR404853; Name=GR404853; organism=Cicer arietinum; type=EST; length=559bpback to top |