GR404853

EST Overview
NameGR404853
Unique NameGR404853
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length559
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR404853 vs. TrEMBL
Match: B9H8Y4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_802381 PE=4 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.549e-12
Identity = 37/42 (88.10%), Postives = 40/42 (95.24%), Query Frame = 3
Query:    3 VQSLLPLHSAVSSARLTSCLGIDSRSSKSLSQGMLCSADPGV 128
            +QSLLP HSAVSSARLTSCL IDSRSS+SLSQGMLCSA+PGV
Sbjct:   52 IQSLLPFHSAVSSARLTSCLSIDSRSSRSLSQGMLCSANPGV 93          
BLAST of GR404853 vs. TrEMBL
Match: Q9LYG7_ARATH (Putative uncharacterized protein T22P22_20 OS=Arabidopsis thaliana GN=T22P22_20 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.922e-11
Identity = 34/42 (80.95%), Postives = 42/42 (100.00%), Query Frame = 3
Query:    3 VQSLLPLHSAVSSARLTSCLGIDSRSSKSLSQGMLCSADPGV 128
            +QSLLPL+SAV+SARLTSCLGIDS++S+SL+QGMLCSA+PGV
Sbjct:   52 LQSLLPLYSAVASARLTSCLGIDSQNSRSLAQGMLCSANPGV 93          
BLAST of GR404853 vs. TrEMBL
Match: D7M4A6_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_909128 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.922e-11
Identity = 34/42 (80.95%), Postives = 42/42 (100.00%), Query Frame = 3
Query:    3 VQSLLPLHSAVSSARLTSCLGIDSRSSKSLSQGMLCSADPGV 128
            +QSLLPL+SAV+SARLTSCLGIDS++S+SL+QGMLCSA+PGV
Sbjct:   52 LQSLLPLYSAVASARLTSCLGIDSQNSRSLAQGMLCSANPGV 93          
BLAST of GR404853 vs. TrEMBL
Match: D7UEA8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_459.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00006992001 PE=4 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 8.798e-8
Identity = 28/42 (66.67%), Postives = 34/42 (80.95%), Query Frame = 3
Query:    3 VQSLLPLHSAVSSARLTSCLGIDSRSSKSLSQGMLCSADPGV 128
            +QSLLPLHSAV++AR+TSCL   SRS K+LSQG LC   PG+
Sbjct:   67 IQSLLPLHSAVAAARMTSCLSSTSRSCKALSQGTLCRTSPGL 108          
BLAST of GR404853 vs. TrEMBL
Match: D7U3N7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_229.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00004713001 PE=4 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 8.798e-8
Identity = 28/42 (66.67%), Postives = 34/42 (80.95%), Query Frame = 3
Query:    3 VQSLLPLHSAVSSARLTSCLGIDSRSSKSLSQGMLCSADPGV 128
            +QSLLPLHSAV++AR+TSCL   SRS K+LSQG LC   PG+
Sbjct:   67 IQSLLPLHSAVAAARMTSCLSSTSRSCKALSQGTLCRTSPGL 108          
BLAST of GR404853 vs. TrEMBL
Match: Q2A9S8_BRAOL (Putative uncharacterized protein OS=Brassica oleracea GN=25.t00029 PE=4 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 1.149e-7
Identity = 28/40 (70.00%), Postives = 33/40 (82.50%), Query Frame = 3
Query:    3 VQSLLPLHSAVSSARLTSCLGIDSRSSKSLSQGMLCSADP 122
            VQSLLPLHS V++ARLTSCL + SRSS++LSQG LC   P
Sbjct:   68 VQSLLPLHSTVAAARLTSCLSVTSRSSRALSQGTLCCTSP 107          
BLAST of GR404853 vs. TrEMBL
Match: Q949V8_ARATH (At4g17310 OS=Arabidopsis thaliana GN=At4g17310 PE=4 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 3.343e-7
Identity = 28/40 (70.00%), Postives = 32/40 (80.00%), Query Frame = 3
Query:    3 VQSLLPLHSAVSSARLTSCLGIDSRSSKSLSQGMLCSADP 122
            VQSLLPLHS V++ARLTSCL   SRSS++LSQG LC   P
Sbjct:   58 VQSLLPLHSTVAAARLTSCLSTTSRSSRALSQGTLCCTSP 97          
BLAST of GR404853 vs. TrEMBL
Match: Q2A9N7_BRAOL (Putative uncharacterized protein OS=Brassica oleracea GN=26.t00030 PE=4 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 7.448e-7
Identity = 26/39 (66.67%), Postives = 32/39 (82.05%), Query Frame = 3
Query:    6 QSLLPLHSAVSSARLTSCLGIDSRSSKSLSQGMLCSADP 122
            QSLLPLHS V++ARLTSCL + SR+S++LSQG LC   P
Sbjct:   68 QSLLPLHSTVAAARLTSCLSVTSRNSRALSQGTLCCTSP 106          
BLAST of GR404853 vs. TrEMBL
Match: D7MC05_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_493145 PE=4 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 7.448e-7
Identity = 28/40 (70.00%), Postives = 32/40 (80.00%), Query Frame = 3
Query:    3 VQSLLPLHSAVSSARLTSCLGIDSRSSKSLSQGMLCSADP 122
            VQSLLPLHS V++ARLTSCL   SRSS++LSQG LC   P
Sbjct:   58 VQSLLPLHSTVAAARLTSCLSTTSRSSRALSQGTLCCTCP 97          
BLAST of GR404853 vs. TrEMBL
Match: B9NCE1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_589737 PE=4 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 7.448e-7
Identity = 26/42 (61.90%), Postives = 34/42 (80.95%), Query Frame = 3
Query:    3 VQSLLPLHSAVSSARLTSCLGIDSRSSKSLSQGMLCSADPGV 128
            VQSLLPLHSAV+++R+TSCL   SR+ ++LSQG LC   PG+
Sbjct:   69 VQSLLPLHSAVAASRMTSCLSTTSRNFRALSQGTLCCTSPGL 110          
BLAST of GR404853 vs. TAIR peptide
Match: AT5G11630.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17310.1); Has 90 Blast hits to 90 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:3740545-3740909 FORWARD LENGTH=93)

HSP 1 Score: 72.0182 bits (175), Expect = 2.359e-13
Identity = 34/42 (80.95%), Postives = 42/42 (100.00%), Query Frame = 3
Query:    3 VQSLLPLHSAVSSARLTSCLGIDSRSSKSLSQGMLCSADPGV 128
            +QSLLPL+SAV+SARLTSCLGIDS++S+SL+QGMLCSA+PGV
Sbjct:   52 LQSLLPLYSAVASARLTSCLGIDSQNSRSLAQGMLCSANPGV 93          
BLAST of GR404853 vs. TAIR peptide
Match: AT4G17310.1 (| Symbols: | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47455.7); Has 164 Blast hits to 164 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:9686466-9686848 REVERSE LENGTH=99)

HSP 1 Score: 58.5362 bits (140), Expect = 2.699e-9
Identity = 28/40 (70.00%), Postives = 32/40 (80.00%), Query Frame = 3
Query:    3 VQSLLPLHSAVSSARLTSCLGIDSRSSKSLSQGMLCSADP 122
            VQSLLPLHS V++ARLTSCL   SRSS++LSQG LC   P
Sbjct:   58 VQSLLPLHSTVAAARLTSCLSTTSRSSRALSQGTLCCTSP 97          
BLAST of GR404853 vs. TAIR peptide
Match: AT5G11630.2 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17310.2); Has 82 Blast hits to 82 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:3740545-3741529 FORWARD LENGTH=91)

HSP 1 Score: 52.7582 bits (125), Expect = 1.481e-7
Identity = 25/32 (78.12%), Postives = 32/32 (100.00%), Query Frame = 3
Query:    3 VQSLLPLHSAVSSARLTSCLGIDSRSSKSLSQ 98
            +QSLLPL+SAV+SARLTSCLGIDS++S+SL+Q
Sbjct:   52 LQSLLPLYSAVASARLTSCLGIDSQNSRSLAQ 83          
BLAST of GR404853 vs. TAIR peptide
Match: AT5G47455.7 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17310.1); Has 147 Blast hits to 147 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 147; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:19250805-19251665 FORWARD LENGTH=100)

HSP 1 Score: 50.447 bits (119), Expect = 7.350e-7
Identity = 24/33 (72.73%), Postives = 29/33 (87.88%), Query Frame = 3
Query:    3 VQSLLPLHSAVSSARLTSCLGIDSRSSKSLSQG 101
            VQSLLPLHS V++ARLTSCL   SRSS++L+QG
Sbjct:   67 VQSLLPLHSTVAAARLTSCLSTTSRSSRALTQG 99          
BLAST of GR404853 vs. TAIR peptide
Match: AT5G47455.6 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr5:19250805-19251665 FORWARD LENGTH=100)

HSP 1 Score: 50.447 bits (119), Expect = 7.350e-7
Identity = 24/33 (72.73%), Postives = 29/33 (87.88%), Query Frame = 3
Query:    3 VQSLLPLHSAVSSARLTSCLGIDSRSSKSLSQG 101
            VQSLLPLHS V++ARLTSCL   SRSS++L+QG
Sbjct:   67 VQSLLPLHSTVAAARLTSCLSTTSRSSRALTQG 99          
BLAST of GR404853 vs. TAIR peptide
Match: AT5G47455.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17310.1); Has 147 Blast hits to 147 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 147; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:19250805-19251665 FORWARD LENGTH=100)

HSP 1 Score: 50.447 bits (119), Expect = 7.350e-7
Identity = 24/33 (72.73%), Postives = 29/33 (87.88%), Query Frame = 3
Query:    3 VQSLLPLHSAVSSARLTSCLGIDSRSSKSLSQG 101
            VQSLLPLHS V++ARLTSCL   SRSS++L+QG
Sbjct:   67 VQSLLPLHSTVAAARLTSCLSTTSRSSRALTQG 99          
The following BLAST results are available for this feature:
BLAST of GR404853 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9H8Y4_POPTR1.549e-1288.10Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q9LYG7_ARATH2.922e-1180.95Putative uncharacterized protein T22P22_20 OS=Arab... [more]
D7M4A6_ARALY2.922e-1180.95Putative uncharacterized protein OS=Arabidopsis ly... [more]
D7UEA8_VITVI8.798e-866.67Whole genome shotgun sequence of line PN40024, sca... [more]
D7U3N7_VITVI8.798e-866.67Whole genome shotgun sequence of line PN40024, sca... [more]
Q2A9S8_BRAOL1.149e-770.00Putative uncharacterized protein OS=Brassica olera... [more]
Q949V8_ARATH3.343e-770.00At4g17310 OS=Arabidopsis thaliana GN=At4g17310 PE=... [more]
Q2A9N7_BRAOL7.448e-766.67Putative uncharacterized protein OS=Brassica olera... [more]
D7MC05_ARALY7.448e-770.00Putative uncharacterized protein OS=Arabidopsis ly... [more]
B9NCE1_POPTR7.448e-761.90Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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BLAST of GR404853 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 6
Match NameE-valueIdentityDescription
AT5G11630.12.359e-1380.95| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
AT4G17310.12.699e-970.00| Symbols: | unknown protein; LOCATED IN: chlorop... [more]
AT5G11630.21.481e-778.13| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
AT5G47455.77.350e-772.73| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
AT5G47455.67.350e-772.73| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
AT5G47455.17.350e-772.73| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 10..27
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR404853 ID=GR404853; Name=GR404853; organism=Cicer arietinum; type=EST; length=559bp
GCGTGCAGTCGCTACTTCCATTGCACTCGGCGGTTTCTTCAGCGCGCCTC
ACTTCTTGCCTCGGCATCGATTCAAGGAGTTCAAAGTCTTTGTCTCAGGG
TATGCTTTGCAGTGCCGACCCCGGAGTTTGATTTATCCGATACTTTTTAT
CTCCTTTCTTATCTAAATGGGACTTGGCACACCACGATAAGAGATTTGGA
AGACTGGTGGTGTTTGATGGACTAGAGTCATCATCGTTCACTTTGCTGGG
ATGCCCTTTTGTTAATTATTTTGAAGTTTTTTGACAGATCATTGTAACAG
GTATATAATTGGAAGGATCTTTCCATCTTCTACTTACAATTTCTGAATTT
CAATGATTTCTTATAATTTTTTTTTACCATTTCACTGTTACTTGTTAGTT
GTTTCCAAATTCAAACTTTGCCGCCAGGACTTGGTGAATAAAATCAAAGT
TTCACTGATTCAACTTGTTATCATGTCTACACTTGGATACTAATGAATAT
GTTAGCTACTCTTATCTTGAAAGTTTTACTAATGACTCAATACTGAAAGT
TCAACCTAC
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