GR404992

EST Overview


Name	GR404992
Unique Name	GR404992
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	569

Libraries


Library Name	Type
LIBEST_024785 ICCV2 Salinity-stressed chickpea root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR404992 vs. SwissProt
Match: PCBP1_RABIT (Poly(rC)-binding protein 1 OS=Oryctolagus cuniculus GN=PCBP1 PE=2 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 8.522e-7
Identity = 25/68 (36.76%), Postives = 40/68 (58.82%), Query Frame = -1

Query:  333 TNTTVEIIVSEHVFGSVYGEDGGNLDRIRQISGANVSVYDPCVGTSGGKVVIFGTPDQTFAAQSLLQA 536
            T TT E+ +  ++ G + G  G N++ IRQ+SGA + + +P  G+SG +V I G+      AQ L+ A
Sbjct:  278 TQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINA 345

[Close]

BLAST of GR404992 vs. SwissProt
Match: PCBP1_MOUSE (Poly(rC)-binding protein 1 OS=Mus musculus GN=Pcbp1 PE=1 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 8.522e-7
Identity = 25/68 (36.76%), Postives = 40/68 (58.82%), Query Frame = -1

Query:  333 TNTTVEIIVSEHVFGSVYGEDGGNLDRIRQISGANVSVYDPCVGTSGGKVVIFGTPDQTFAAQSLLQA 536
            T TT E+ +  ++ G + G  G N++ IRQ+SGA + + +P  G+SG +V I G+      AQ L+ A
Sbjct:  278 TQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINA 345

[Close]

BLAST of GR404992 vs. SwissProt
Match: PCBP1_HUMAN (Poly(rC)-binding protein 1 OS=Homo sapiens GN=PCBP1 PE=1 SV=2)

HSP 1 Score: 53.5286 bits (127), Expect = 8.522e-7
Identity = 25/68 (36.76%), Postives = 40/68 (58.82%), Query Frame = -1

Query:  333 TNTTVEIIVSEHVFGSVYGEDGGNLDRIRQISGANVSVYDPCVGTSGGKVVIFGTPDQTFAAQSLLQA 536
            T TT E+ +  ++ G + G  G N++ IRQ+SGA + + +P  G+SG +V I G+      AQ L+ A
Sbjct:  278 TQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINA 345

[Close]

BLAST of GR404992 vs. SwissProt
Match: PCBP1_BOVIN (Poly(rC)-binding protein 1 OS=Bos taurus GN=PCBP1 PE=2 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 8.522e-7
Identity = 25/68 (36.76%), Postives = 40/68 (58.82%), Query Frame = -1

Query:  333 TNTTVEIIVSEHVFGSVYGEDGGNLDRIRQISGANVSVYDPCVGTSGGKVVIFGTPDQTFAAQSLLQA 536
            T TT E+ +  ++ G + G  G N++ IRQ+SGA + + +P  G+SG +V I G+      AQ L+ A
Sbjct:  278 TQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINA 345

[Close]

BLAST of GR404992 vs. TrEMBL
Match: B9IJ63_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_825463 PE=4 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.147e-21
Identity = 57/86 (66.28%), Postives = 66/86 (76.74%), Query Frame = -1

Query:  312 EPGRGNVLATVTNTTVEIIVSEHVFGSVYGEDGGNLDRIRQISGANVSVYDPCVGTSGGKVVIFGTPDQTFAAQSLLQAFIQTGHA 569
            E G G   A VTNTTVEI+V E+ FGSVYGE+G NL R+RQISGA V V++P +GTS   VVI GTPD+T AAQSLLQAFI TG +
Sbjct:  637 ELGSGGKSAFVTNTTVEIVVPENAFGSVYGENGSNLARLRQISGAKVIVHEPRLGTSDRIVVISGTPDETQAAQSLLQAFILTGQS 722

[Close]

BLAST of GR404992 vs. TrEMBL
Match: D5A8D9_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.956e-21
Identity = 53/85 (62.35%), Postives = 65/85 (76.47%), Query Frame = -1

Query:  309 GRGNVLATVTNTTVEIIVSEHVFGSVYGEDGGNLDRIRQISGANVSVYDPCVGTSGGKVVIFGTPDQTFAAQSLLQAFIQTGHAS 563
            G G+  A VTNTTVE++V E V GS+YGE+G NL +IRQISGA V ++DP  G + G VVI GTP+QT AAQSLLQAFI +G +S
Sbjct:   46 GSGSQSAVVTNTTVEVVVPERVIGSIYGENGNNLTQIRQISGAKVIIHDPRPGATEGLVVISGTPEQTHAAQSLLQAFIMSGQSS 130

[Close]

BLAST of GR404992 vs. TrEMBL
Match: D7U659_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_114.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00012514001 PE=4 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.268e-20
Identity = 52/84 (61.90%), Postives = 66/84 (78.57%), Query Frame = -1

Query:  318 EPGRGNVLATVTNTTVEIIVSEHVFGSVYGEDGGNLDRIRQISGANVSVYDPCVGTSGGKVVIFGTPDQTFAAQSLLQAFIQTG 569
            E G G+  A +TNTTVEI++ E+V GSVYGE+G NL R+R+ISGA V++++P  GTS   V+I GTPD+T AAQSLLQAFI TG
Sbjct:  493 ELGSGSKSAIITNTTVEIVIPENVIGSVYGENGNNLARLRKISGAKVTLHEPRPGTSDRIVIISGTPDETQAAQSLLQAFIHTG 576

[Close]

BLAST of GR404992 vs. TrEMBL
Match: A5AKJ4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022038 PE=4 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.268e-20
Identity = 52/84 (61.90%), Postives = 66/84 (78.57%), Query Frame = -1

Query:  318 EPGRGNVLATVTNTTVEIIVSEHVFGSVYGEDGGNLDRIRQISGANVSVYDPCVGTSGGKVVIFGTPDQTFAAQSLLQAFIQTG 569
            E G G+  A +TNTTVEI++ E+V GSVYGE+G NL R+R+ISGA V++++P  GTS   V+I GTPD+T AAQSLLQAFI TG
Sbjct:  477 ELGSGSKSAIITNTTVEIVIPENVIGSVYGENGNNLARLRKISGAKVTLHEPRPGTSDRIVIISGTPDETQAAQSLLQAFIHTG 560

[Close]

BLAST of GR404992 vs. TrEMBL
Match: B9HEA8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_562363 PE=4 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.825e-20
Identity = 52/80 (65.00%), Postives = 61/80 (76.25%), Query Frame = -1

Query:  318 GNVLATVTNTTVEIIVSEHVFGSVYGEDGGNLDRIRQISGANVSVYDPCVGTSGGKVVIFGTPDQTFAAQSLLQAFIQTG 557
            G   A VTNTTVEI++ EH FGSVYGE+G NL R+RQ SGA V V++P +GTS   +VI GTPD+T AAQSLL AFI TG
Sbjct:  666 GGKSAFVTNTTVEIVIPEHTFGSVYGENGSNLARLRQFSGAKVIVHEPRLGTSDRIIVISGTPDETQAAQSLLHAFILTG 745

[Close]

BLAST of GR404992 vs. TrEMBL
Match: B9S9M0_RICCO (Poly(RC)-binding protein, putative OS=Ricinus communis GN=RCOM_0886780 PE=4 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.074e-19
Identity = 54/86 (62.79%), Postives = 65/86 (75.58%), Query Frame = -1

Query:  312 EPGRGNVLATVTNTTVEIIVSEHVFGSVYGEDGGNLDRIRQISGANVSVYDPCVGTSGGKVVIFGTPDQTFAAQSLLQAFIQTGHA 569
            E G G+  A VTNTTVEI V E+V GSVYGE+  NL R+RQISGA V V++P +G+S   +VI GTPD+T AAQSLLQAFI TG +
Sbjct:  612 ELGSGSKSAIVTNTTVEIRVPENVIGSVYGENDSNLTRLRQISGAKVIVHEPRLGSSDRIIVISGTPDETQAAQSLLQAFILTGQS 697

[Close]

BLAST of GR404992 vs. TrEMBL
Match: D7MRA9_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_686162 PE=4 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.510e-18
Identity = 51/85 (60.00%), Postives = 61/85 (71.76%), Query Frame = -1

Query:  309 GRGNVLATVTNTTVEIIVSEHVFGSVYGEDGGNLDRIRQISGANVSVYDPCVGTSGGKVVIFGTPDQTFAAQSLLQAFIQTGHAS 563
            G G+  A VTNTTVEI V E+    VYGE G NL+++RQISGA V V++P +GTS   +VI GTPDQT AAQ+LL AFI TG  S
Sbjct:  773 GSGHKSAIVTNTTVEIRVPENAMSFVYGEQGYNLEQLRQISGARVIVHEPPLGTSDRIIVISGTPDQTQAAQNLLHAFILTGETS 857

[Close]

BLAST of GR404992 vs. TrEMBL
Match: B9T2B8_RICCO (Nucleic acid binding protein, putative OS=Ricinus communis GN=RCOM_0410480 PE=4 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.238e-17
Identity = 48/71 (67.61%), Postives = 53/71 (74.65%), Query Frame = -1

Query:  327 VTNTTVEIIVSEHVFGSVYGEDGGNLDRIRQISGANVSVYDPCVGTSGGKVVIFGTPDQTFAAQSLLQAFI 539
            V NT +E++V E   GSVYGEDG NL R+RQISGA V V +P  G SG  VVI GTPDQT AAQSLLQAFI
Sbjct:  614 VVNTIIELVVPEDTIGSVYGEDGSNLARLRQISGAKVEVREPSSGKSGRIVVISGTPDQTNAAQSLLQAFI 684

[Close]

BLAST of GR404992 vs. TrEMBL
Match: Q84ZX0_ARATH (HEN4 OS=Arabidopsis thaliana GN=HEN4 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.923e-17
Identity = 49/85 (57.65%), Postives = 60/85 (70.59%), Query Frame = -1

Query:  309 GRGNVLATVTNTTVEIIVSEHVFGSVYGEDGGNLDRIRQISGANVSVYDPCVGTSGGKVVIFGTPDQTFAAQSLLQAFIQTGHAS 563
            G G+  A VTNTTVEI V  +    VYGE G NL+++RQISGA V +++P +GTS   +VI GTPDQT AAQ+LL AFI TG  S
Sbjct:  777 GSGHKSAIVTNTTVEIRVPANAMSFVYGEQGYNLEQLRQISGARVIIHEPPLGTSDRIIVISGTPDQTQAAQNLLHAFILTGETS 861

[Close]

BLAST of GR404992 vs. TrEMBL
Match: Q0WLL8_ARATH (HEN4 (Fragment) OS=Arabidopsis thaliana GN=At5g64390 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.923e-17
Identity = 49/85 (57.65%), Postives = 60/85 (70.59%), Query Frame = -1

Query:  309 GRGNVLATVTNTTVEIIVSEHVFGSVYGEDGGNLDRIRQISGANVSVYDPCVGTSGGKVVIFGTPDQTFAAQSLLQAFIQTGHAS 563
            G G+  A VTNTTVEI V  +    VYGE G NL+++RQISGA V +++P +GTS   +VI GTPDQT AAQ+LL AFI TG  S
Sbjct:  171 GSGHKSAIVTNTTVEIRVPANAMSFVYGEQGYNLEQLRQISGARVIIHEPPLGTSDRIIVISGTPDQTQAAQNLLHAFILTGETS 255

[Close]

BLAST of GR404992 vs. TAIR peptide
Match: AT5G64390.1 (| Symbols: HEN4 | RNA-binding KH domain-containing protein | chr5:25743442-25747380 FORWARD LENGTH=857)

HSP 1 Score: 92.0485 bits (227), Expect = 2.268e-19
Identity = 49/85 (57.65%), Postives = 60/85 (70.59%), Query Frame = -1

Query:  309 GRGNVLATVTNTTVEIIVSEHVFGSVYGEDGGNLDRIRQISGANVSVYDPCVGTSGGKVVIFGTPDQTFAAQSLLQAFIQTGHAS 563
            G G+  A VTNTTVEI V  +    VYGE G NL+++RQISGA V +++P +GTS   +VI GTPDQT AAQ+LL AFI TG  S
Sbjct:  765 GSGHKSAIVTNTTVEIRVPANAMSFVYGEQGYNLEQLRQISGARVIIHEPPLGTSDRIIVISGTPDQTQAAQNLLHAFILTGETS 849

[Close]

BLAST of GR404992 vs. TAIR peptide
Match: AT5G64390.3 (| Symbols: HEN4 | RNA-binding KH domain-containing protein | chr5:25743442-25747380 FORWARD LENGTH=866)

HSP 1 Score: 90.1225 bits (222), Expect = 8.619e-19
Identity = 48/83 (57.83%), Postives = 59/83 (71.08%), Query Frame = -1

Query:  309 GNVLATVTNTTVEIIVSEHVFGSVYGEDGGNLDRIRQISGANVSVYDPCVGTSGGKVVIFGTPDQTFAAQSLLQAFIQTGHAS 557
            G+  A VTNTTVEI V  +    VYGE G NL+++RQISGA V +++P +GTS   +VI GTPDQT AAQ+LL AFI TG  S
Sbjct:  776 GHKSAIVTNTTVEIRVPANAMSFVYGEQGYNLEQLRQISGARVIIHEPPLGTSDRIIVISGTPDQTQAAQNLLHAFILTGETS 858

[Close]

BLAST of GR404992 vs. TAIR peptide
Match: AT1G51580.1 (| Symbols: | RNA-binding KH domain-containing protein | chr1:19125612-19128102 FORWARD LENGTH=621)

HSP 1 Score: 78.1814 bits (191), Expect = 3.389e-15
Identity = 40/82 (48.78%), Postives = 54/82 (65.85%), Query Frame = -1

Query:  312 GNVLATVTNTTVEIIVSEHVFGSVYGEDGGNLDRIRQISGANVSVYDPCVGTSGGKVVIFGTPDQTFAAQSLLQAFIQTGHA 557
            G+    +T+  VEI++ +   G VYGE+  NL+ I+Q+SGANV V+DP  GT+ G VV+ GT DQ   AQSLL AFI  G +
Sbjct:  540 GSENPVMTSANVEIVIPQAYLGHVYGENCSNLNYIKQVSGANVVVHDPKAGTTEGLVVVSGTSDQAHFAQSLLHAFILCGQS 621

[Close]

BLAST of GR404992 vs. TAIR peptide
Match: AT2G22600.1 (| Symbols: | RNA-binding KH domain-containing protein | chr2:9596617-9599050 FORWARD LENGTH=632)

HSP 1 Score: 58.5362 bits (140), Expect = 2.779e-9
Identity = 31/72 (43.06%), Postives = 45/72 (62.50%), Query Frame = -1

Query:  327 TVTNTTVEIIVSEHVFGSVYGEDGGNLDRIRQISGANVSVYDPCVGTSGGKVVIFGTPDQTFAAQSLLQAFI 542
            +V   T+E+ V +   GS+YG DG  +D ++QISGANV V DP  GT    V+I G P+Q   A SL+++ +
Sbjct:  560 SVRKITLELAVEKDALGSLYGRDGTGVDNLQQISGANVDVKDP-TGTE-ATVLISGNPEQARTAMSLIESIL 629

[Close]

BLAST of GR404992 vs. TAIR peptide
Match: AT5G46190.1 (| Symbols: | RNA-binding KH domain-containing protein | chr5:18723435-18725834 REVERSE LENGTH=644)

HSP 1 Score: 56.9954 bits (136), Expect = 8.086e-9
Identity = 29/71 (40.85%), Postives = 42/71 (59.15%), Query Frame = -1

Query:  321 NTTVEIIVSEHVFGSVYGEDGGNLDRIRQISGANVSVYDPCVGTSGGKVVIFGTPDQTFAAQSLLQAFIQT 533
            +TT+E+ +  +  G V G  GGNLD IR+ISGA + + D      G   +I GT +Q   A++L QAFI +
Sbjct:  573 STTMEVRIPANAVGKVMGRGGGNLDNIRRISGAMIEISDSKNSHGGRVALISGTSEQKRTAENLFQAFIMS 643

The following BLAST results are available for this feature:

BLAST of GR404992 vs. SwissProt
BLAST of GR404992 vs. TrEMBL
BLAST of GR404992 vs. TAIR peptide

BLAST of GR404992 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 4


Match Name	E-value	Identity	Description
PCBP1_RABIT	8.522e-7	36.76	Poly(rC)-binding protein 1 OS=Oryctolagus cuniculu...	[more]
PCBP1_MOUSE	8.522e-7	36.76	Poly(rC)-binding protein 1 OS=Mus musculus GN=Pcbp...	[more]
PCBP1_HUMAN	8.522e-7	36.76	Poly(rC)-binding protein 1 OS=Homo sapiens GN=PCBP...	[more]
PCBP1_BOVIN	8.522e-7	36.76	Poly(rC)-binding protein 1 OS=Bos taurus GN=PCBP1 ...	[more]

BLAST of GR404992 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9IJ63_POPTR	1.147e-21	66.28	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D5A8D9_PICSI	1.956e-21	62.35	Putative uncharacterized protein OS=Picea sitchens...	[more]
D7U659_VITVI	1.268e-20	61.90	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5AKJ4_VITVI	1.268e-20	61.90	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9HEA8_POPTR	2.825e-20	65.00	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9S9M0_RICCO	1.074e-19	62.79	Poly(RC)-binding protein, putative OS=Ricinus comm...	[more]
D7MRA9_ARALY	4.510e-18	60.00	Predicted protein OS=Arabidopsis lyrata subsp. lyr...	[more]
B9T2B8_RICCO	2.238e-17	67.61	Nucleic acid binding protein, putative OS=Ricinus ...	[more]
Q84ZX0_ARATH	2.923e-17	57.65	HEN4 OS=Arabidopsis thaliana GN=HEN4 PE=2 SV=1	[more]
Q0WLL8_ARATH	2.923e-17	57.65	HEN4 (Fragment) OS=Arabidopsis thaliana GN=At5g643...	[more]

BLAST of GR404992 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 5


Match Name	E-value	Identity	Description
AT5G64390.1	2.268e-19	57.65	\| Symbols: HEN4 \| RNA-binding KH domain-containing...	[more]
AT5G64390.3	8.619e-19	57.83	\| Symbols: HEN4 \| RNA-binding KH domain-containing...	[more]
AT1G51580.1	3.389e-15	48.78	\| Symbols: \| RNA-binding KH domain-containing pro...	[more]
AT2G22600.1	2.779e-9	43.06	\| Symbols: \| RNA-binding KH domain-containing pro...	[more]
AT5G46190.1	8.086e-9	40.85	\| Symbols: \| RNA-binding KH domain-containing pro...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 6..16 score: NAcoord: 42..55 score
None	No IPR available	SEG	seg	seg	coord: 61..72 score
None	No IPR available	GENE3D	3.30.1370.10	no description	coord: 13..82 score: 7
None	No IPR available	PANTHER	PTHR10288	RNA-BINDING PROTEIN RELATED	coord: 7..81 score: 1.8
None	No IPR available	PANTHER	PTHR10288:SF48	POLY(RC)-BINDING PROTIEN 1,2,3	coord: 7..81 score: 1.8
None	No IPR available	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 12..83 score: 4.1
None	No IPR available	SEG	seg	seg	coord: 4..25 score
IPR004087	K Homology	SMART	SM00322	no description	coord: 12..82 score: 5
IPR004088	K Homology, type 1	PROFILE	PS50084	KH_TYPE_1	coord: 13..77 score: 12
IPR018111	K Homology, type 1, subgroup	PFAM	PF00013	KH_1	coord: 15..76 score: 4.2

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR404992 ID=GR404992; Name=GR404992; organism=Cicer arietinum; type=EST; length=569bp
CTGTATAAATGGATCTTGGAGAAAATAATAGCTCCCACATCCAATCCAGC
CCTTTTAAGAAAAACAAACAAAATGTGTCTTGTTATCAATCTCTACAGGA
GGTAACCATCATATAATTTTGATGTGAAAGAGTGAGTCTATAACAAACAG
TAAATATGACTATTCACAATGTGAAGGTGAGTAGTGAAGTTGTGTGATGT
GATATATCTATGTACACCAACCAAACCACTAATGGCACCTCCTCCTCCTG
TATTGAAGGAAGAACTAAAAAATGAAATGAAATGAAATTGTCATGTGATT
CATCATCAGCTTGCATGTCCAGTTTGAATGAAAGCTTGAAGCAAGCTCTG
AGCTGCAAATGTTTGATCAGGTGTCCCAAATATCACTACCTTCCCTCCAC
TTGTACCAACACAAGGATCATAAACACTAACATTTGCACCTGATATCTGT
CTGATTCGATCTAAATTGCCGCCATCTTCACCATAAACAGAACCAAAGAC
ATGTTCAGAAACTATAATCTCCACAGTAGTATTTGTCACAGTGGCAAGTA
CATTTCCTCTGCCGGGTTC

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR004087	KH_dom
IPR004088	KH_dom_type_1
IPR018111	K Homology, type 1, subgroup

Search form