GR406275

EST Overview


Name	GR406275
Unique Name	GR406275
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	404

Libraries


Library Name	Type
LIBEST_024786 JG11 Salinity-stressed chickpea root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR406275 vs. TrEMBL
Match: B9HI68_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_720776 PE=4 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 5.910e-25
Identity = 64/108 (59.26%), Postives = 68/108 (62.96%), Query Frame = 1

Query:    1 GAAFCRSXXXXXXXXXXXXXXXSVTDADAEDDPSTFFSLFLLRAAGFLLPCYIMAWAISILXXXXXXXXXXXXXXXXXXFVLQSGQHRGLQFAIAPGPPTVNPHHEQV 324
            GAAFCRS               ++TD+DA+DD STFFSLFLLRAAGFLLPCYIMAWAISIL                  FVLQSGQ RGLQF IAPG PTV PH E V
Sbjct:  174 GAAFCRSVALILMALLLLRHALTLTDSDADDDVSTFFSLFLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATQVAFVLQSGQQRGLQFTIAPG-PTVTPHQEPV 280

[Close]

BLAST of GR406275 vs. TrEMBL
Match: B9HY07_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_724181 PE=4 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.831e-24
Identity = 63/108 (58.33%), Postives = 65/108 (60.19%), Query Frame = 1

Query:    1 GAAFCRSXXXXXXXXXXXXXXXSVTDADAEDDPSTFFSLFLLRAAGFLLPCYIMAWAISILXXXXXXXXXXXXXXXXXXFVLQSGQHRGLQFAIAPGPPTVNPHHEQV 324
            GAAFCRS               + TD+D EDD S FFSLFLLRAAGFLLPCYIMAWAISIL                  FVLQSGQ RGLQF IAPG PTV PH E V
Sbjct:  174 GAAFCRSVALILMALLLLRHALTATDSDGEDDVSAFFSLFLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATQVAFVLQSGQQRGLQFTIAPG-PTVTPHQEPV 280

[Close]

BLAST of GR406275 vs. TrEMBL
Match: B9S8W6_RICCO (Membrane associated ring finger 1,8, putative OS=Ricinus communis GN=RCOM_0836410 PE=4 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 5.531e-23
Identity = 62/108 (57.41%), Postives = 64/108 (59.26%), Query Frame = 1

Query:    1 GAAFCRSXXXXXXXXXXXXXXXSVTDADAEDDPSTFFSLFLLRAAGFLLPCYIMAWAISILXXXXXXXXXXXXXXXXXXFVLQSGQHRGLQFAIAPGPPTVNPHHEQV 324
            GAAFCRS               +VTDAD +DD STFFSLFLLRAAGFLLPCYIMAWAISIL                  FVLQSGQHRGL F IA G P V  H E V
Sbjct:  177 GAAFCRSAALILMALLLLRHALTVTDADGDDDVSTFFSLFLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATQVAFVLQSGQHRGLHFTIASG-PQVTAHQEPV 283

[Close]

BLAST of GR406275 vs. TrEMBL
Match: D7SIB2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00008001001 PE=4 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 6.116e-22
Identity = 59/107 (55.14%), Postives = 65/107 (60.75%), Query Frame = 1

Query:    1 GAAFCRSXXXXXXXXXXXXXXXSVTDADAEDDPSTFFSLFLLRAAGFLLPCYIMAWAISIL-XXXXXXXXXXXXXXXXXXFVLQSGQHRGLQFAIAPGPPTVNPHHE 318
            GAAFCRS               ++T+AD +DD S FFSLFLLRAAGFLLPCYIMAWAISIL                   F+LQ+GQHRGLQF IAPG P V PH E
Sbjct:  183 GAAFCRSAALILMALLLLRHALNITNADGDDDASNFFSLFLLRAAGFLLPCYIMAWAISILQRRRQRQEAAAALAATEVAFMLQAGQHRGLQFTIAPG-PAVTPHQE 288

[Close]

BLAST of GR406275 vs. TrEMBL
Match: D7TN81_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_26.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00019978001 PE=4 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 7.476e-20
Identity = 56/105 (53.33%), Postives = 60/105 (57.14%), Query Frame = 1

Query:    1 GAAFCRSXXXXXXXXXXXXXXXSVTDADAE--DDPSTFFSLFLLRAAGFLLPCYIMAWAISILXXXXXXXXXXXXXXXXXXFVLQSGQHRGLQFAIAPGPPTVNP 309
            GAAFCRS               ++TDAD +  DD STFFSLFLLRAAGFLLPCYIMAWAISIL                  FVLQSGQ RGLQF +AP      P
Sbjct:  483 GAAFCRSVALILMALLLLRHALTITDADTDGDDDTSTFFSLFLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATQVAFVLQSGQRRGLQFTVAPAHVVAPP 587

[Close]

BLAST of GR406275 vs. TrEMBL
Match: A5C5T5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040117 PE=4 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 7.476e-20
Identity = 56/105 (53.33%), Postives = 60/105 (57.14%), Query Frame = 1

Query:    1 GAAFCRSXXXXXXXXXXXXXXXSVTDADAE--DDPSTFFSLFLLRAAGFLLPCYIMAWAISILXXXXXXXXXXXXXXXXXXFVLQSGQHRGLQFAIAPGPPTVNP 309
            GAAFCRS               ++TDAD +  DD STFFSLFLLRAAGFLLPCYIMAWAISIL                  FVLQSGQ RGLQF +AP      P
Sbjct:  171 GAAFCRSVALILMALLLLRHALTITDADTDGDDDTSTFFSLFLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATQVAFVLQSGQRRGLQFTVAPAHVVAPP 275

[Close]

BLAST of GR406275 vs. TrEMBL
Match: B9RLY9_RICCO (Membrane associated ring finger 1,8, putative OS=Ricinus communis GN=RCOM_1472160 PE=4 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.665e-19
Identity = 56/104 (53.85%), Postives = 63/104 (60.58%), Query Frame = 1

Query:    1 GAAFCRSXXXXXXXXXXXXXXXSVTDADAEDDPSTFFSLFLLRAAGFLLPCYIMAWAISILXXXXXXXXXXXXXXXXXXFVLQSGQHRGLQFAIAPGPPTVNPH 312
            GAAFCRS               S+T  D+++D STFFSLFL+RAAGFLLPCYIMAWAISIL                  F+LQ+GQ RGLQF IAPG   VNPH
Sbjct:  180 GAAFCRSAALILMALLLLRHAMSLT-GDSDEDASTFFSLFLIRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATEVAFMLQAGQRRGLQFTIAPG-LAVNPH 281

[Close]

BLAST of GR406275 vs. TrEMBL
Match: A3CCS9_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_34434 PE=4 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 5.357e-18
Identity = 50/107 (46.73%), Postives = 56/107 (52.34%), Query Frame = 1

Query:    1 GAAFCRSXXXXXXXXXXXXXXXSVTDADAEDDPSTFFSLFLLRAAGFLLPCYIMAWAISILXXXXXXXXXXXXXXXXXXFVLQSGQHRGLQFAIAPGPPTVNPHHEQ 321
            GAAFCRS               S++D + +DD ST FSLFLLRAAGFLLPCYIMAW  SIL                  F+LQS Q   LQF IAP  P  + H  Q
Sbjct:  162 GAAFCRSAALILMALLLLRHALSISDNEGDDDASTMFSLFLLRAAGFLLPCYIMAWIFSILHRRRQRQEAAAIAAAEVAFILQSAQGHALQFTIAPDSPATSQHEPQ 268

[Close]

BLAST of GR406275 vs. TrEMBL
Match: Q2R1L5_ORYSJ (Os11g0600700 protein OS=Oryza sativa subsp. japonica GN=Os11g0600700 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.194e-17
Identity = 50/107 (46.73%), Postives = 55/107 (51.40%), Query Frame = 1

Query:    1 GAAFCRSXXXXXXXXXXXXXXXSVTDADAEDDPSTFFSLFLLRAAGFLLPCYIMAWAISILXXXXXXXXXXXXXXXXXXFVLQSGQHRGLQFAIAPGPPTVNPHHEQ 321
            GAAFCRS               S++D + +DD ST FSLFLLRAAGFLLPCYIMAW  SIL                  F+LQS Q   LQF IAP  P    H  Q
Sbjct:  162 GAAFCRSAALILMALLLLRHALSISDNEGDDDASTMFSLFLLRAAGFLLPCYIMAWIFSILHRRRQRQEAAAIAAAEVAFILQSAQGHALQFTIAPDSPATPQHEPQ 268

[Close]

BLAST of GR406275 vs. TrEMBL
Match: B4FES8_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 7.736e-17
Identity = 53/109 (48.62%), Postives = 59/109 (54.13%), Query Frame = 1

Query:    1 GAAFCRSXXXXXXXXXXXXXXXSVTDADA-EDDPSTFFSLFLLRAAGFLLPCYIMAWAISILXXXXXXXXXXXXXXXXXXFVLQSGQHRGLQFAIAPGPPTVNPHHEQV 324
            GAAFCRS               S++D +  +DD ST FSLFLLRAAGFLLPCYIMAW  SIL                  F+LQS + R LQFAIAP  P   P HE V
Sbjct:  174 GAAFCRSAALILMALLLLRHALSMSDNEGNDDDASTIFSLFLLRAAGFLLPCYIMAWIFSILHRRRQRQEEAALAAAEVAFILQSARGRALQFAIAPDSP-ATPQHEPV 281

[Close]

BLAST of GR406275 vs. TAIR peptide
Match: AT3G47550.6 (| Symbols: | RING/FYVE/PHD zinc finger superfamily protein | chr3:17523841-17525278 FORWARD LENGTH=288)

HSP 1 Score: 89.3521 bits (220), Expect = 7.172e-19
Identity = 51/105 (48.57%), Postives = 58/105 (55.24%), Query Frame = 1

Query:    1 GAAFCRSXXXXXXXXXXXXXXXSVT-DADAEDDPSTFFSLFLLRAAGFLLPCYIMAWAISILXXXXXXXXXXXXXXXXXXFVLQSG--QHRGLQFAIAPGPPTVN 306
            GAAFCRS               ++T + D EDDP+ FFSLFLLRAAGFLLPCYIMAWAI IL                  F++  G  Q RGL FA+AP PP  N
Sbjct:  179 GAAFCRSAALILMALLLLRDALNLTTNPDDEDDPTAFFSLFLLRAAGFLLPCYIMAWAIGILQRRRQRQEAAALAAAEVTFMIHGGGPQRRGLHFAVAPQPPISN 283

[Close]

BLAST of GR406275 vs. TAIR peptide
Match: AT3G47550.3 (| Symbols: | RING/FYVE/PHD zinc finger superfamily protein | chr3:17523841-17525278 FORWARD LENGTH=288)

HSP 1 Score: 89.3521 bits (220), Expect = 7.172e-19
Identity = 51/105 (48.57%), Postives = 58/105 (55.24%), Query Frame = 1

Query:    1 GAAFCRSXXXXXXXXXXXXXXXSVT-DADAEDDPSTFFSLFLLRAAGFLLPCYIMAWAISILXXXXXXXXXXXXXXXXXXFVLQSG--QHRGLQFAIAPGPPTVN 306
            GAAFCRS               ++T + D EDDP+ FFSLFLLRAAGFLLPCYIMAWAI IL                  F++  G  Q RGL FA+AP PP  N
Sbjct:  179 GAAFCRSAALILMALLLLRDALNLTTNPDDEDDPTAFFSLFLLRAAGFLLPCYIMAWAIGILQRRRQRQEAAALAAAEVTFMIHGGGPQRRGLHFAVAPQPPISN 283

[Close]

BLAST of GR406275 vs. TAIR peptide
Match: AT5G62460.1 (| Symbols: | RING/FYVE/PHD zinc finger superfamily protein | chr5:25075545-25077072 FORWARD LENGTH=307)

HSP 1 Score: 81.6481 bits (200), Expect = 1.496e-16
Identity = 51/115 (44.35%), Postives = 59/115 (51.30%), Query Frame = 1

Query:    1 GAAFCRSXXXXXXXXXXXXXXXSVTDA---DAEDDPSTFFSLFLLRAAGFLLPCYIMAWAISILXXXXXXXXXXXXXXXXXXFVLQSG------QHRGLQFAIAPGPPTVNPHHE 318
            GAAFCRS               ++T+    D EDDPS FF LF+LRAAGFLLPCYIMAWAISIL                  F+L SG      +  GL FA+ P     NPHH+
Sbjct:  188 GAAFCRSAALILMALLLLRHALNLTNNNSDDEEDDPSAFFFLFMLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAAAEVAFMLHSGGGGGGQRRGGLHFAVPP-ELISNPHHQ 301

[Close]

BLAST of GR406275 vs. TAIR peptide
Match: AT2G02960.3 (| Symbols: | RING/FYVE/PHD zinc finger superfamily protein | chr2:862346-863980 REVERSE LENGTH=271)

HSP 1 Score: 77.411 bits (189), Expect = 2.820e-15
Identity = 47/99 (47.47%), Postives = 53/99 (53.54%), Query Frame = 1

Query:    1 GAAFCRSXXXXXXXXXXXXXXXSVTDAD--AEDDPSTFFSLFLLRAAGFLLPCYIMAWAISILXXXXXXXXXXXXXXXXXXFVLQSGQHRGLQFAIAPG 291
            GAAFCRS               ++TD     EDDPS+  SL LLRAAGFLLPCYIMAWAISIL                   VLQSGQ R + F ++PG
Sbjct:  153 GAAFCRSAALILMALLLLRHALTITDDTDGEEDDPSSILSLVLLRAAGFLLPCYIMAWAISIL-QRRRQRQEAAALATQFALVLQSGQPRTVHFTVSPG 250

[Close]

BLAST of GR406275 vs. TAIR peptide
Match: AT2G02960.1 (| Symbols: | RING/FYVE/PHD zinc finger superfamily protein | chr2:862346-863980 REVERSE LENGTH=271)

HSP 1 Score: 77.411 bits (189), Expect = 2.820e-15
Identity = 47/99 (47.47%), Postives = 53/99 (53.54%), Query Frame = 1

Query:    1 GAAFCRSXXXXXXXXXXXXXXXSVTDAD--AEDDPSTFFSLFLLRAAGFLLPCYIMAWAISILXXXXXXXXXXXXXXXXXXFVLQSGQHRGLQFAIAPG 291
            GAAFCRS               ++TD     EDDPS+  SL LLRAAGFLLPCYIMAWAISIL                   VLQSGQ R + F ++PG
Sbjct:  153 GAAFCRSAALILMALLLLRHALTITDDTDGEEDDPSSILSLVLLRAAGFLLPCYIMAWAISIL-QRRRQRQEAAALATQFALVLQSGQPRTVHFTVSPG 250

[Close]

BLAST of GR406275 vs. TAIR peptide
Match: AT2G02960.4 (| Symbols: | RING/FYVE/PHD zinc finger superfamily protein | chr2:862346-863980 REVERSE LENGTH=271)

HSP 1 Score: 77.411 bits (189), Expect = 2.820e-15
Identity = 47/99 (47.47%), Postives = 53/99 (53.54%), Query Frame = 1

Query:    1 GAAFCRSXXXXXXXXXXXXXXXSVTDAD--AEDDPSTFFSLFLLRAAGFLLPCYIMAWAISILXXXXXXXXXXXXXXXXXXFVLQSGQHRGLQFAIAPG 291
            GAAFCRS               ++TD     EDDPS+  SL LLRAAGFLLPCYIMAWAISIL                   VLQSGQ R + F ++PG
Sbjct:  153 GAAFCRSAALILMALLLLRHALTITDDTDGEEDDPSSILSLVLLRAAGFLLPCYIMAWAISIL-QRRRQRQEAAALATQFALVLQSGQPRTVHFTVSPG 250

[Close]

BLAST of GR406275 vs. TAIR peptide
Match: AT2G02960.2 (| Symbols: | RING/FYVE/PHD zinc finger superfamily protein | chr2:862346-863980 REVERSE LENGTH=271)

HSP 1 Score: 77.411 bits (189), Expect = 2.820e-15
Identity = 47/99 (47.47%), Postives = 53/99 (53.54%), Query Frame = 1

Query:    1 GAAFCRSXXXXXXXXXXXXXXXSVTDAD--AEDDPSTFFSLFLLRAAGFLLPCYIMAWAISILXXXXXXXXXXXXXXXXXXFVLQSGQHRGLQFAIAPG 291
            GAAFCRS               ++TD     EDDPS+  SL LLRAAGFLLPCYIMAWAISIL                   VLQSGQ R + F ++PG
Sbjct:  153 GAAFCRSAALILMALLLLRHALTITDDTDGEEDDPSSILSLVLLRAAGFLLPCYIMAWAISIL-QRRRQRQEAAALATQFALVLQSGQPRTVHFTVSPG 250

[Close]

BLAST of GR406275 vs. TAIR peptide
Match: AT3G47550.2 (| Symbols: | RING/FYVE/PHD zinc finger superfamily protein | chr3:17523841-17525168 FORWARD LENGTH=249)

HSP 1 Score: 72.7886 bits (177), Expect = 6.947e-14
Identity = 38/62 (61.29%), Postives = 42/62 (67.74%), Query Frame = 1

Query:    1 GAAFCRSXXXXXXXXXXXXXXXSVT-DADAEDDPSTFFSLFLLRAAGFLLPCYIMAWAISIL 183
            GAAFCRS               ++T + D EDDP+ FFSLFLLRAAGFLLPCYIMAWAI IL
Sbjct:  179 GAAFCRSAALILMALLLLRDALNLTTNPDDEDDPTAFFSLFLLRAAGFLLPCYIMAWAIGIL 240

[Close]

BLAST of GR406275 vs. TAIR peptide
Match: AT1G14260.2 (| Symbols: | RING/FYVE/PHD zinc finger superfamily protein | chr1:4873200-4874430 FORWARD LENGTH=265)

HSP 1 Score: 56.9954 bits (136), Expect = 3.945e-9
Identity = 35/63 (55.56%), Postives = 40/63 (63.49%), Query Frame = 1

Query:    1 GAAFCRSXXXXXXXXXXXXXXXSVTD-ADAEDD-PSTFFSLFLLRAAGFLLPCYIMAWAISIL 183
            GAAF RS               ++ D +D+EDD PS+  SLFLLRAA FLLPCYIMA AISIL
Sbjct:  167 GAAFFRSAALILMTLLLLRHALTIPDYSDSEDDDPSSILSLFLLRAASFLLPCYIMASAISIL 229

[Close]

BLAST of GR406275 vs. TAIR peptide
Match: AT1G14260.1 (| Symbols: | RING/FYVE/PHD zinc finger superfamily protein | chr1:4873200-4874430 FORWARD LENGTH=265)

HSP 1 Score: 56.9954 bits (136), Expect = 3.945e-9
Identity = 35/63 (55.56%), Postives = 40/63 (63.49%), Query Frame = 1

Query:    1 GAAFCRSXXXXXXXXXXXXXXXSVTD-ADAEDD-PSTFFSLFLLRAAGFLLPCYIMAWAISIL 183
            GAAF RS               ++ D +D+EDD PS+  SLFLLRAA FLLPCYIMA AISIL
Sbjct:  167 GAAFFRSAALILMTLLLLRHALTIPDYSDSEDDDPSSILSLFLLRAASFLLPCYIMASAISIL 229

The following BLAST results are available for this feature:

BLAST of GR406275 vs. TrEMBL
BLAST of GR406275 vs. TAIR peptide

BLAST of GR406275 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9HI68_POPTR	5.910e-25	59.26	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9HY07_POPTR	3.831e-24	58.33	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9S8W6_RICCO	5.531e-23	57.41	Membrane associated ring finger 1,8, putative OS=R...	[more]
D7SIB2_VITVI	6.116e-22	55.14	Whole genome shotgun sequence of line PN40024, sca...	[more]
D7TN81_VITVI	7.476e-20	53.33	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5C5T5_VITVI	7.476e-20	53.33	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9RLY9_RICCO	1.665e-19	53.85	Membrane associated ring finger 1,8, putative OS=R...	[more]
A3CCS9_ORYSJ	5.357e-18	46.73	Putative uncharacterized protein OS=Oryza sativa s...	[more]
Q2R1L5_ORYSJ	1.194e-17	46.73	Os11g0600700 protein OS=Oryza sativa subsp. japoni...	[more]
B4FES8_MAIZE	7.736e-17	48.62	Putative uncharacterized protein OS=Zea mays PE=2 ...	[more]

BLAST of GR406275 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT3G47550.6	7.172e-19	48.57	\| Symbols: \| RING/FYVE/PHD zinc finger superfamil...	[more]
AT3G47550.3	7.172e-19	48.57	\| Symbols: \| RING/FYVE/PHD zinc finger superfamil...	[more]
AT5G62460.1	1.496e-16	44.35	\| Symbols: \| RING/FYVE/PHD zinc finger superfamil...	[more]
AT2G02960.3	2.820e-15	47.47	\| Symbols: \| RING/FYVE/PHD zinc finger superfamil...	[more]
AT2G02960.1	2.820e-15	47.47	\| Symbols: \| RING/FYVE/PHD zinc finger superfamil...	[more]
AT2G02960.4	2.820e-15	47.47	\| Symbols: \| RING/FYVE/PHD zinc finger superfamil...	[more]
AT2G02960.2	2.820e-15	47.47	\| Symbols: \| RING/FYVE/PHD zinc finger superfamil...	[more]
AT3G47550.2	6.947e-14	61.29	\| Symbols: \| RING/FYVE/PHD zinc finger superfamil...	[more]
AT1G14260.2	3.945e-9	55.56	\| Symbols: \| RING/FYVE/PHD zinc finger superfamil...	[more]
AT1G14260.1	3.945e-9	55.56	\| Symbols: \| RING/FYVE/PHD zinc finger superfamil...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022143	Protein of unknown function DUF3675	PFAM	PF12428	DUF3675	coord: 1..59 score: 3.9
None	No IPR available	SEG	seg	seg	coord: 8..22 score: NAcoord: 62..79 score
None	No IPR available	SEG	seg	seg	coord: 57..70 score
None	No IPR available	SEG	seg	seg	coord: 20..26 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR406275 ID=GR406275; Name=GR406275; organism=Cicer arietinum; type=EST; length=404bp
GGAGCTGCATTTTGTCGTTCAGCTGCTCTAATTTTAATGGCCCTTTTACT
CTTGAGACACGCACTTTCTGTCACGGACGCTGATGCCGAGGATGATCCAT
CAACTTTTTTCTCTCTTTTCTTGCTTCGTGCTGCTGGCTTTCTTTTACCT
TGCTATATCATGGCTTGGGCAATCAGTATTTTGCAAAGACGGCGGCAAAG
ACAAGAGGCTGCAGCACTAGCCGCAACCCAAGTTGCCTTCGTGCTACAAT
CCGGGCAGCATAGGGGTCTGCAATTCGCCATAGCACCAGGACCACCAACA
GTGAATCCACACCACGAACAAGTGTAGTTTGTAATATCAGTGTATGAAAA
TGGAGTGTTCACGATGTAAAGTAGACTTGTTGAAATGCCATGCTACTCTT
ACCC

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
IPR022143	DUF3675

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