GR406561

EST Overview


Name	GR406561
Unique Name	GR406561
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	328

Libraries


Library Name	Type
LIBEST_024786 JG11 Salinity-stressed chickpea root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR406561 vs. SwissProt
Match: MAF1_SOLLC (MFP1 attachment factor 1 OS=Solanum lycopersicum GN=MAF1 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 6.057e-16
Identity = 41/64 (64.06%), Postives = 50/64 (78.12%), Query Frame = 3

Query:  135 QNSASAPQQNGDQPKLIPGGFSIWPPTQRTRDAVINRLIETLTTPSVLSKRYGTLPPDEASAAA 326
            Q+  +  Q+  ++P  +   FSIWPPTQRTRDAVINRLIE+L+TPS+LSKRYGTLP DEAS  A
Sbjct:    8 QSQETVTQETQNKP--MTTSFSIWPPTQRTRDAVINRLIESLSTPSILSKRYGTLPQDEASETA 69

[Close]

BLAST of GR406561 vs. SwissProt
Match: WPP2_ARATH (WPP domain-containing protein 2 OS=Arabidopsis thaliana GN=WPP2 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.669e-14
Identity = 43/85 (50.59%), Postives = 54/85 (63.53%), Query Frame = 3

Query:   78 NTSISKMSDPEIAPEPQPEQNSASAPQQNGDQPKLIPGGFS--IWPPTQRTRDAVINRLIETLTTPSVLSKRYGTLPPDEASAAA 326
            +T+IS M+DP        E  S         + +  PGG S  IWPPTQ+TRDAV+NRLIETL+T S+LSKRYGTL  D+A+  A
Sbjct:   22 STTISAMTDPT-----SQEAASKDTDLTKEAESEKKPGGISLRIWPPTQKTRDAVLNRLIETLSTESILSKRYGTLKSDDATTVA 101

[Close]

BLAST of GR406561 vs. SwissProt
Match: WPP1_ARATH (WPP domain-containing protein 1 OS=Arabidopsis thaliana GN=WPP1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.069e-12
Identity = 40/82 (48.78%), Postives = 54/82 (65.85%), Query Frame = 3

Query:   84 SISKMSDPEIAPEPQPEQNSASAPQQNGDQ-PKLIPGGFSIWPPTQRTRDAVINRLIETLTTPSVLSKRYGTLPPDEASAAA 326
            SI+  S P I+      +NS + P    ++ P  +     IWPPTQ+TRDAVINRLIETL+T S+LSKR+G+L  +EAS+ A
Sbjct:    8 SITTSSPPPISET----ENSTTLPTTETEKNPNPVTISLRIWPPTQKTRDAVINRLIETLSTESILSKRFGSLESEEASSVA 85

[Close]

BLAST of GR406561 vs. SwissProt
Match: WPP3_ARATH (WPP domain-containing protein 3 OS=Arabidopsis thaliana GN=WPP3 PE=1 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 6.486e-10
Identity = 26/44 (59.09%), Postives = 37/44 (84.09%), Query Frame = 3

Query:  195 FSIWPPTQRTRDAVINRLIETLTTPSVLSKRYGTLPPDEASAAA 326
            FS+WPP Q++RD V+N +I+TL+T S+LS +YGT+ P+EASA A
Sbjct:   51 FSVWPPCQKSRDYVVNSMIKTLSTDSILSYKYGTIKPEEASAVA 94

[Close]

BLAST of GR406561 vs. TrEMBL
Match: Q2HRI7_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MtrDRAFT_AC158501g23v2 PE=4 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 7.552e-17
Identity = 48/70 (68.57%), Postives = 54/70 (77.14%), Query Frame = 3

Query:  117 PEPQPEQNSASAPQQNGDQPKLIPGGFSIWPPTQRTRDAVINRLIETLTTPSVLSKRYGTLPPDEASAAA 326
            PE +PEQ+S  AP Q   QP    G +SIWPP QRTRDAV NRLIETL+TPSVL+KRYGT+  DEASAAA
Sbjct:    4 PETKPEQDSTLAPPQ---QPNFT-GNYSIWPPKQRTRDAVKNRLIETLSTPSVLTKRYGTMSADEASAAA 69

[Close]

BLAST of GR406561 vs. TrEMBL
Match: Q9M7N4_SOYBN (MFP1 attachment factor 1 OS=Glycine max GN=maf1 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.091e-15
Identity = 47/77 (61.04%), Postives = 50/77 (64.94%), Query Frame = 3

Query:   96 MSDPEIAPEPQPEQNSASAPQQNGDQPKLIPGGFSIWPPTQRTRDAVINRLIETLTTPSVLSKRYGTLPPDEASAAA 326
            MSD E  PE         AP Q      +    FSIWPPTQRTRDAV+ RLIETL+ PSVLSKRYGTL  DEASAAA
Sbjct:    1 MSDTETTPEQPSTPPQTEAPPQPDPSAAV---SFSIWPPTQRTRDAVVKRLIETLSAPSVLSKRYGTLSSDEASAAA 74

[Close]

BLAST of GR406561 vs. TrEMBL
Match: B9R748_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1588580 PE=4 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.057e-14
Identity = 45/89 (50.56%), Postives = 59/89 (66.29%), Query Frame = 3

Query:   81 TSISKMSDPE----IAPEPQPEQNSASAPQQNGDQPKLIPGG---FSIWPPTQRTRDAVINRLIETLTTPSVLSKRYGTLPPDEASAAA 326
            T+++KM+D +    I  +  P ++     QQ  + PK +       SIWPPTQRTRDAVI RLIETL++PSVLSKRYGT+  DEA +AA
Sbjct:    4 TAVAKMTDSDGESTINQDTVPTESHPQPQQQQQEPPKKLSTSGISLSIWPPTQRTRDAVITRLIETLSSPSVLSKRYGTISHDEAESAA 92

[Close]

BLAST of GR406561 vs. TrEMBL
Match: D7KPX3_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_473867 PE=4 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.129e-12
Identity = 43/85 (50.59%), Postives = 54/85 (63.53%), Query Frame = 3

Query:   78 NTSISKMSDPEIAPEPQPEQNSASAPQQNGDQPKLIPGGFS--IWPPTQRTRDAVINRLIETLTTPSVLSKRYGTLPPDEASAAA 326
            +T++S M+DP        E  S         + +  PGG S  IWPPTQ+TRDAV+NRLIETL+T S+LSKRYGTL  DEA+  A
Sbjct:   22 STTLSAMTDPT-----SQEAASRDTDLTKEAESEKKPGGISLRIWPPTQKTRDAVLNRLIETLSTESILSKRYGTLNSDEATTVA 101

[Close]

BLAST of GR406561 vs. TrEMBL
Match: Q9M7N2_9ROSI (MFP1 attachment factor 1 (Fragment) OS=Picramnia pentandra GN=maf1 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.474e-12
Identity = 40/64 (62.50%), Postives = 45/64 (70.31%), Query Frame = 3

Query:  114 APEPQPEQNSASAPQQNGDQPKLIPG-GFSIWPPTQRTRDAVINRLIETLTTPSVLSKRYGTLP 302
            A +PQP + S         QPK      FSIWPPTQRTRDAV NRL+ETL+TPSVLSKRYGT+P
Sbjct:    7 AQDPQPTEKS---------QPKTPSSFSFSIWPPTQRTRDAVFNRLVETLSTPSVLSKRYGTIP 61

[Close]

BLAST of GR406561 vs. TrEMBL
Match: B9MVW8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_740524 PE=4 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.474e-12
Identity = 35/44 (79.55%), Postives = 41/44 (93.18%), Query Frame = 3

Query:  195 FSIWPPTQRTRDAVINRLIETLTTPSVLSKRYGTLPPDEASAAA 326
            FSIWPPTQRTRDA+I+RLIETL+T SVLSKRYGT+P +EAS A+
Sbjct:   57 FSIWPPTQRTRDAIISRLIETLSTTSVLSKRYGTIPKEEASEAS 100

[Close]

BLAST of GR406561 vs. TrEMBL
Match: Q9M7N3_9LILI (MFP1 attachment factor 1 (Fragment) OS=Canna indica GN=MAF1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.601e-12
Identity = 37/73 (50.68%), Postives = 49/73 (67.12%), Query Frame = 3

Query:  108 EIAPEPQPEQNSASAPQQNGDQPKLIPGGFSIWPPTQRTRDAVINRLIETLTTPSVLSKRYGTLPPDEASAAA 326
            E A     ++   SA  + G  P L    F IWPPTQRTR+AV+ RL+ETLT+ SVLSKRYG +P ++A++AA
Sbjct:    3 EGAASEMKDEAEKSAVTEGGGYPSL---SFKIWPPTQRTREAVVRRLVETLTSQSVLSKRYGVIPEEDATSAA 72

[Close]

BLAST of GR406561 vs. TrEMBL
Match: B9GNS6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1071973 PE=4 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.630e-11
Identity = 38/65 (58.46%), Postives = 47/65 (72.31%), Query Frame = 3

Query:  123 PQPEQNSASAPQQNGDQPKLIPGGFSIWPPTQRTRDAVINRLIETLTTPSVLSKRYGTLPPDEAS 317
            P PE +S++   +   +  +    FSIWP TQRTRD+VI RLIETL+T SVLSKRYGT+P DEAS
Sbjct:   15 PPPEDDSSATDTKKQARNAI---SFSIWPLTQRTRDSVITRLIETLSTTSVLSKRYGTVPHDEAS 76

[Close]

BLAST of GR406561 vs. TrEMBL
Match: D7MVY1_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_497203 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.128e-11
Identity = 38/81 (46.91%), Postives = 52/81 (64.20%), Query Frame = 3

Query:   84 SISKMSDPEIAPEPQPEQNSASAPQQNGDQPKLIPGGFSIWPPTQRTRDAVINRLIETLTTPSVLSKRYGTLPPDEASAAA 326
            +I+  S P I+   + E ++     +    P  +     IWPPTQ+TRDAVINRLIETL+T S+LSKR+GTL  +EAS+ A
Sbjct:    8 TITTTSTPPIS---ETETSTTLPTMETEKNPNPVTISLRIWPPTQKTRDAVINRLIETLSTESILSKRFGTLDSEEASSVA 85

[Close]

BLAST of GR406561 vs. TrEMBL
Match: D7MQ19_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_494697 PE=4 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.630e-11
Identity = 39/82 (47.56%), Postives = 50/82 (60.98%), Query Frame = 3

Query:   81 TSISKMSDPEIAPEPQPEQNSASAPQQNGDQPKLIPGGFSIWPPTQRTRDAVINRLIETLTTPSVLSKRYGTLPPDEASAAA 326
            T+IS+       P  + E+N           P  +     IWPPTQ+TRDAVINRLIETL+T S+LSKR+GTL  +EAS+ A
Sbjct:   19 TAISETETSTTLPTMETEKN-----------PNPVTISLRIWPPTQKTRDAVINRLIETLSTESILSKRFGTLDSEEASSVA 89

[Close]

BLAST of GR406561 vs. TAIR peptide
Match: AT1G47200.1 (| Symbols: WPP2 | WPP domain protein 2 | chr1:17298181-17298723 REVERSE LENGTH=180)

HSP 1 Score: 76.2554 bits (186), Expect = 4.491e-15
Identity = 43/85 (50.59%), Postives = 54/85 (63.53%), Query Frame = 3

Query:   78 NTSISKMSDPEIAPEPQPEQNSASAPQQNGDQPKLIPGGFS--IWPPTQRTRDAVINRLIETLTTPSVLSKRYGTLPPDEASAAA 326
            +T+IS M+DP        E  S         + +  PGG S  IWPPTQ+TRDAV+NRLIETL+T S+LSKRYGTL  D+A+  A
Sbjct:   22 STTISAMTDPT-----SQEAASKDTDLTKEAESEKKPGGISLRIWPPTQKTRDAVLNRLIETLSTESILSKRYGTLKSDDATTVA 101

[Close]

BLAST of GR406561 vs. TAIR peptide
Match: AT5G43070.1 (| Symbols: WPP1 | WPP domain protein 1 | chr5:17289259-17289726 REVERSE LENGTH=155)

HSP 1 Score: 72.0182 bits (175), Expect = 8.469e-14
Identity = 40/82 (48.78%), Postives = 54/82 (65.85%), Query Frame = 3

Query:   84 SISKMSDPEIAPEPQPEQNSASAPQQNGDQ-PKLIPGGFSIWPPTQRTRDAVINRLIETLTTPSVLSKRYGTLPPDEASAAA 326
            SI+  S P I+      +NS + P    ++ P  +     IWPPTQ+TRDAVINRLIETL+T S+LSKR+G+L  +EAS+ A
Sbjct:    8 SITTSSPPPISET----ENSTTLPTTETEKNPNPVTISLRIWPPTQKTRDAVINRLIETLSTESILSKRFGSLESEEASSVA 85

[Close]

BLAST of GR406561 vs. TAIR peptide
Match: AT5G27940.1 (| Symbols: WPP3 | WPP domain protein 3 | chr5:9974467-9974940 FORWARD LENGTH=157)

HSP 1 Score: 62.7734 bits (151), Expect = 5.138e-11
Identity = 26/44 (59.09%), Postives = 37/44 (84.09%), Query Frame = 3

Query:  195 FSIWPPTQRTRDAVINRLIETLTTPSVLSKRYGTLPPDEASAAA 326
            FS+WPP Q++RD V+N +I+TL+T S+LS +YGT+ P+EASA A
Sbjct:   51 FSVWPPCQKSRDYVVNSMIKTLSTDSILSYKYGTIKPEEASAVA 94

The following BLAST results are available for this feature:

BLAST of GR406561 vs. SwissProt
BLAST of GR406561 vs. TrEMBL
BLAST of GR406561 vs. TAIR peptide

BLAST of GR406561 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 4


Match Name	E-value	Identity	Description
MAF1_SOLLC	6.057e-16	64.06	MFP1 attachment factor 1 OS=Solanum lycopersicum G...	[more]
WPP2_ARATH	5.669e-14	50.59	WPP domain-containing protein 2 OS=Arabidopsis tha...	[more]
WPP1_ARATH	1.069e-12	48.78	WPP domain-containing protein 1 OS=Arabidopsis tha...	[more]
WPP3_ARATH	6.486e-10	59.09	WPP domain-containing protein 3 OS=Arabidopsis tha...	[more]

BLAST of GR406561 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q2HRI7_MEDTR	7.552e-17	68.57	Putative uncharacterized protein OS=Medicago trunc...	[more]
Q9M7N4_SOYBN	1.091e-15	61.04	MFP1 attachment factor 1 OS=Glycine max GN=maf1 PE...	[more]
B9R748_RICCO	2.057e-14	50.56	Putative uncharacterized protein OS=Ricinus commun...	[more]
D7KPX3_ARALY	1.129e-12	50.59	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
Q9M7N2_9ROSI	1.474e-12	62.50	MFP1 attachment factor 1 (Fragment) OS=Picramnia p...	[more]
B9MVW8_POPTR	1.474e-12	79.55	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q9M7N3_9LILI	5.601e-12	50.68	MFP1 attachment factor 1 (Fragment) OS=Canna indic...	[more]
B9GNS6_POPTR	1.630e-11	58.46	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7MVY1_ARALY	2.128e-11	46.91	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
D7MQ19_ARALY	3.630e-11	47.56	Putative uncharacterized protein OS=Arabidopsis ly...	[more]

BLAST of GR406561 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT1G47200.1	4.491e-15	50.59	\| Symbols: WPP2 \| WPP domain protein 2 \| chr1:1729...	[more]
AT5G43070.1	8.469e-14	48.78	\| Symbols: WPP1 \| WPP domain protein 1 \| chr5:1728...	[more]
AT5G27940.1	5.138e-11	59.09	\| Symbols: WPP3 \| WPP domain protein 3 \| chr5:9974...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 34..45 score
None	No IPR available	SEG	seg	seg	coord: 9..21 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR406561 ID=GR406561; Name=GR406561; organism=Cicer arietinum; type=EST; length=328bp
TTTTGTTATCCTCAAACACACAAAAATTGCGACTCCTATACTCTTCCTTA
CAGACCCTCCTCTCTCCTATTATCCCAAATACGTCAATTTCGAAAATGTC
CGACCCGGAAATCGCACCCGAACCCCAACCGGAACAAAACTCCGCTTCAG
CACCGCAACAAAACGGAGACCAACCCAAACTCATCCCCGGCGGCTTCAGC
ATATGGCCACCTACCCAGCGCACTCGCGACGCGGTCATCAATCGCTTAAT
CGAAACCCTAACTACCCCCTCCGTCCTTTCCAAGCGCTACGGTACATTGC
CTCCTGACGAGGCCTCCGCTGCCGCTCG

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