GR406855

EST Overview


Name	GR406855
Unique Name	GR406855
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	357

Libraries


Library Name	Type
LIBEST_024786 JG11 Salinity-stressed chickpea root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR406855 vs. SwissProt
Match: Y3804_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 OS=Arabidopsis thaliana GN=At3g28040 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.914e-12
Identity = 30/63 (47.62%), Postives = 44/63 (69.84%), Query Frame = -3

Query:  161 DMVRGALEEGKVEECVDERLLGNFAAEEAIPVIKLGLICASQVPSNRPDMDEVINILELIQCP 349
            D VR  LE+G V EC+D  +   ++ +E +PV+KL L+C SQ+PSNRP M E++ IL++I  P
Sbjct:  945 DHVRVMLEQGNVLECIDPVMEEQYSEDEVLPVLKLALVCTSQIPSNRPTMAEIVQILQVINSP 1007

[Close]

BLAST of GR406855 vs. SwissProt
Match: Y1124_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g12460 OS=Arabidopsis thaliana GN=At1g12460 PE=1 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 7.911e-8
Identity = 29/61 (47.54%), Postives = 36/61 (59.02%), Query Frame = -3

Query:  167 DMVRGALEEGKVEECVDERLLGNFAAEEAIPVIKLGLICASQVPSNRPDMDEVINILELIQ 349
            D VR  LE G   +C D RL   F   E I V+KLGL+C S+ P  RP M EV+ +LE I+
Sbjct:  818 DYVRDLLETGSASDCFDRRLR-EFEENELIQVMKLGLLCTSENPLKRPSMAEVVQVLESIR 877

[Close]

BLAST of GR406855 vs. TrEMBL
Match: B9SRS9_RICCO (Brassinosteroid LRR receptor kinase, putative OS=Ricinus communis GN=RCOM_1057860 PE=4 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.144e-26
Identity = 57/65 (87.69%), Postives = 62/65 (95.38%), Query Frame = -3

Query:  158 CDMVRGALEEGKVEECVDERLLGNFAAEEAIPVIKLGLICASQVPSNRPDMDEVINILELIQCPS 352
            CDMVRGALE G+VEECVD RLLGNF A+EAIPVIKLGLICASQVPSNRPDM+EV+NILELIQCP+
Sbjct:  897 CDMVRGALENGRVEECVDGRLLGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQCPA 961

[Close]

BLAST of GR406855 vs. TrEMBL
Match: D7SQY8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_58.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00030179001 PE=4 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.195e-25
Identity = 57/65 (87.69%), Postives = 60/65 (92.31%), Query Frame = -3

Query:  158 CDMVRGALEEGKVEECVDERLLGNFAAEEAIPVIKLGLICASQVPSNRPDMDEVINILELIQCPS 352
            CDMVRGAL+EGKVEECVD RL G F A+EAIPVIKLGLICASQVPSNRPDM EV+NILELIQCPS
Sbjct:  738 CDMVRGALDEGKVEECVDRRLQGEFPADEAIPVIKLGLICASQVPSNRPDMGEVVNILELIQCPS 802

[Close]

BLAST of GR406855 vs. TrEMBL
Match: C6ZRZ8_SOYBN (Leucine-rich repeat transmembrane protein kinase OS=Glycine max PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.477e-25
Identity = 55/65 (84.62%), Postives = 60/65 (92.31%), Query Frame = -3

Query:  158 CDMVRGALEEGKVEECVDERLLGNFAAEEAIPVIKLGLICASQVPSNRPDMDEVINILELIQCPS 352
            CDMVRGALEEG+VEEC+DERL G F AEEAIPV+KLGLIC SQVPSNRPDM EV+NILELI+CPS
Sbjct:  900 CDMVRGALEEGRVEECIDERLQGKFPAEEAIPVMKLGLICTSQVPSNRPDMGEVVNILELIRCPS 964

[Close]

BLAST of GR406855 vs. TrEMBL
Match: B9IGT6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_577182 PE=4 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.477e-25
Identity = 53/65 (81.54%), Postives = 62/65 (95.38%), Query Frame = -3

Query:  158 CDMVRGALEEGKVEECVDERLLGNFAAEEAIPVIKLGLICASQVPSNRPDMDEVINILELIQCPS 352
            CDMVRGALE+G+VEEC+D RL GNF A+EAIPV+KLGLIC+SQVPSNRPDM+EV+NILELIQCP+
Sbjct:  894 CDMVRGALEDGRVEECIDGRLRGNFPADEAIPVVKLGLICSSQVPSNRPDMEEVVNILELIQCPA 958

[Close]

BLAST of GR406855 vs. TrEMBL
Match: B9I8E3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_571667 PE=4 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 4.541e-25
Identity = 54/65 (83.08%), Postives = 61/65 (93.85%), Query Frame = -3

Query:  158 CDMVRGALEEGKVEECVDERLLGNFAAEEAIPVIKLGLICASQVPSNRPDMDEVINILELIQCPS 352
            CDMVRGALEEG+VEECVD RLLGNF A+EA+PV+KLGLIC SQVPSNRPDM EV+NIL+LI+CPS
Sbjct:  894 CDMVRGALEEGRVEECVDGRLLGNFPADEAVPVMKLGLICTSQVPSNRPDMGEVVNILDLIRCPS 958

[Close]

BLAST of GR406855 vs. TrEMBL
Match: D7T4C0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_67.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00032670001 PE=4 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.012e-24
Identity = 56/65 (86.15%), Postives = 59/65 (90.77%), Query Frame = -3

Query:  158 CDMVRGALEEGKVEECVDERLLGNFAAEEAIPVIKLGLICASQVPSNRPDMDEVINILELIQCPS 352
            CDMVRGALEEGKVEECVD RL G F AEEAIPV+KLGLIC SQVPSNRPDM EV+NILELI+CPS
Sbjct:  705 CDMVRGALEEGKVEECVDGRLQGKFPAEEAIPVMKLGLICTSQVPSNRPDMAEVVNILELIRCPS 769

[Close]

BLAST of GR406855 vs. TrEMBL
Match: A5BBX2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005469 PE=4 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.012e-24
Identity = 56/65 (86.15%), Postives = 59/65 (90.77%), Query Frame = -3

Query:  158 CDMVRGALEEGKVEECVDERLLGNFAAEEAIPVIKLGLICASQVPSNRPDMDEVINILELIQCPS 352
            CDMVRGALEEGKVEECVD RL G F AEEAIPV+KLGLIC SQVPSNRPDM EV+NILELI+CPS
Sbjct:   96 CDMVRGALEEGKVEECVDGRLQGKFPAEEAIPVMKLGLICTSQVPSNRPDMAEVVNILELIRCPS 160

[Close]

BLAST of GR406855 vs. TrEMBL
Match: B9S4G0_RICCO (ATP binding protein, putative OS=Ricinus communis GN=RCOM_0690080 PE=4 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.321e-24
Identity = 52/65 (80.00%), Postives = 60/65 (92.31%), Query Frame = -3

Query:  158 CDMVRGALEEGKVEECVDERLLGNFAAEEAIPVIKLGLICASQVPSNRPDMDEVINILELIQCPS 352
            CDMVRGALEEG+VEEC+D+RL GNF A+E +PV+KLGLIC SQVPSNRPDM EV+NILELI+CPS
Sbjct:  892 CDMVRGALEEGRVEECIDDRLQGNFPADEVVPVMKLGLICTSQVPSNRPDMGEVVNILELIRCPS 956

[Close]

BLAST of GR406855 vs. TrEMBL
Match: B9IQ62_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_574120 PE=4 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 8.563e-24
Identity = 52/65 (80.00%), Postives = 59/65 (90.77%), Query Frame = -3

Query:  158 CDMVRGALEEGKVEECVDERLLGNFAAEEAIPVIKLGLICASQVPSNRPDMDEVINILELIQCPS 352
            CDMVRGALEEG+VEECVD RL+GNF A+E +PV+KLGLIC  QVPSNRPDM EVINIL+LI+CPS
Sbjct:  892 CDMVRGALEEGRVEECVDGRLMGNFPADEVVPVMKLGLICTLQVPSNRPDMGEVINILDLIRCPS 956

[Close]

BLAST of GR406855 vs. TrEMBL
Match: B9HDJ0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_762582 PE=4 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.461e-23
Identity = 52/65 (80.00%), Postives = 60/65 (92.31%), Query Frame = -3

Query:  158 CDMVRGALEEGKVEECVDERLLGNFAAEEAIPVIKLGLICASQVPSNRPDMDEVINILELIQCPS 352
            CDMVRGALE+G+VEEC+D +L G   A+EAIPVIKLGLICASQVPSNRPDM+EV+NILELIQCP+
Sbjct:  894 CDMVRGALEDGRVEECIDGKLGGKVPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQCPA 958

[Close]

BLAST of GR406855 vs. TAIR peptide
Match: AT5G01890.1 (| Symbols: | Leucine-rich receptor-like protein kinase family protein | chr5:341661-344650 REVERSE LENGTH=967)

HSP 1 Score: 109.383 bits (272), Expect = 4.643e-25
Identity = 51/65 (78.46%), Postives = 57/65 (87.69%), Query Frame = -3

Query:  158 CDMVRGALEEGKVEECVDERLLGNFAAEEAIPVIKLGLICASQVPSNRPDMDEVINILELIQCPS 352
            C+ VR  LEEG+VEECVD RL GNF AEEAIPVIKLGL+C SQVPSNRP+M+EV+ ILELIQCPS
Sbjct:  899 CETVREGLEEGRVEECVDPRLRGNFPAEEAIPVIKLGLVCGSQVPSNRPEMEEVVKILELIQCPS 963

[Close]

BLAST of GR406855 vs. TAIR peptide
Match: AT3G56370.1 (| Symbols: | Leucine-rich repeat protein kinase family protein | chr3:20899403-20902390 REVERSE LENGTH=964)

HSP 1 Score: 95.9005 bits (237), Expect = 5.312e-21
Identity = 43/65 (66.15%), Postives = 52/65 (80.00%), Query Frame = -3

Query:  158 CDMVRGALEEGKVEECVDERLLGNFAAEEAIPVIKLGLICASQVPSNRPDMDEVINILELIQCPS 352
            CDMVR ALE+G+ +EC+D RL G F  EEA+ VIKLGLIC SQVPS+RP M E +NIL +I+CPS
Sbjct:  891 CDMVREALEDGRADECIDPRLQGKFPVEEAVAVIKLGLICTSQVPSSRPHMGEAVNILRMIRCPS 955

[Close]

BLAST of GR406855 vs. TAIR peptide
Match: AT3G28040.1 (| Symbols: | Leucine-rich receptor-like protein kinase family protein | chr3:10435139-10438268 FORWARD LENGTH=1016)

HSP 1 Score: 69.3218 bits (168), Expect = 5.324e-13
Identity = 30/63 (47.62%), Postives = 44/63 (69.84%), Query Frame = -3

Query:  161 DMVRGALEEGKVEECVDERLLGNFAAEEAIPVIKLGLICASQVPSNRPDMDEVINILELIQCP 349
            D VR  LE+G V EC+D  +   ++ +E +PV+KL L+C SQ+PSNRP M E++ IL++I  P
Sbjct:  945 DHVRVMLEQGNVLECIDPVMEEQYSEDEVLPVLKLALVCTSQIPSNRPTMAEIVQILQVINSP 1007

[Close]

BLAST of GR406855 vs. TAIR peptide
Match: AT1G62950.1 (| Symbols: | leucine-rich repeat transmembrane protein kinase family protein | chr1:23315294-23318061 FORWARD LENGTH=890)

HSP 1 Score: 58.5362 bits (140), Expect = 9.398e-10
Identity = 30/61 (49.18%), Postives = 38/61 (62.30%), Query Frame = -3

Query:  167 DMVRGALEEGKVEECVDERLLGNFAAEEAIPVIKLGLICASQVPSNRPDMDEVINILELIQ 349
            D VR  LE G   +C D RL G F   E I V+KLGLIC ++ P  RP + EV+ +LELI+
Sbjct:  826 DHVRNLLETGSASDCFDRRLRG-FEENELIQVMKLGLICTTENPLKRPSIAEVVQVLELIR 885

[Close]

BLAST of GR406855 vs. TAIR peptide
Match: AT1G12460.1 (| Symbols: | Leucine-rich repeat protein kinase family protein | chr1:4247703-4250444 FORWARD LENGTH=882)

HSP 1 Score: 55.8398 bits (133), Expect = 6.092e-9
Identity = 29/61 (47.54%), Postives = 36/61 (59.02%), Query Frame = -3

Query:  167 DMVRGALEEGKVEECVDERLLGNFAAEEAIPVIKLGLICASQVPSNRPDMDEVINILELIQ 349
            D VR  LE G   +C D RL   F   E I V+KLGL+C S+ P  RP M EV+ +LE I+
Sbjct:  818 DYVRDLLETGSASDCFDRRLR-EFEENELIQVMKLGLLCTSENPLKRPSMAEVVQVLESIR 877

[Close]

BLAST of GR406855 vs. TAIR peptide
Match: AT4G33430.2 (| Symbols: BAK1 | BRI1-associated receptor kinase | chr4:16086654-16090288 REVERSE LENGTH=662)

HSP 1 Score: 51.9878 bits (123), Expect = 8.796e-8
Identity = 25/58 (43.10%), Postives = 35/58 (60.34%), Query Frame = -3

Query:  176 DMVRGALEEGKVEECVDERLLGNFAAEEAIPVIKLGLICASQVPSNRPDMDEVINILE 349
            D V+G L+E K+E  VD  L GN+  EE   +I++ L+C    P  RP M EV+ +LE
Sbjct:  554 DWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 611

[Close]

BLAST of GR406855 vs. TAIR peptide
Match: AT4G33430.1 (| Symbols: BAK1, RKS10, SERK3, ELG, ATSERK3, ATBAK1 | BRI1-associated receptor kinase | chr4:16086654-16090288 REVERSE LENGTH=615)

HSP 1 Score: 51.9878 bits (123), Expect = 8.796e-8
Identity = 25/58 (43.10%), Postives = 35/58 (60.34%), Query Frame = -3

Query:  176 DMVRGALEEGKVEECVDERLLGNFAAEEAIPVIKLGLICASQVPSNRPDMDEVINILE 349
            D V+G L+E K+E  VD  L GN+  EE   +I++ L+C    P  RP M EV+ +LE
Sbjct:  507 DWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 564

[Close]

BLAST of GR406855 vs. TAIR peptide
Match: AT3G55550.1 (| Symbols: | Concanavalin A-like lectin protein kinase family protein | chr3:20600019-20602073 REVERSE LENGTH=684)

HSP 1 Score: 51.2174 bits (121), Expect = 1.500e-7
Identity = 25/58 (43.10%), Postives = 34/58 (58.62%), Query Frame = -3

Query:  176 DMVRGALEEGKVEECVDERLLGNFAAEEAIPVIKLGLICASQVPSNRPDMDEVINILE 349
            D V    + G + + VD RL G F  EE + VIKLGL+C++  P  RP M +V+  LE
Sbjct:  561 DWVWSRWQSGDIRDVVDRRLNGEFDEEEVVMVIKLGLLCSNNSPEVRPTMRQVVMYLE 618

The following BLAST results are available for this feature:

BLAST of GR406855 vs. SwissProt
BLAST of GR406855 vs. TrEMBL
BLAST of GR406855 vs. TAIR peptide

BLAST of GR406855 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 2


Match Name	E-value	Identity	Description
Y3804_ARATH	6.914e-12	47.62	Probably inactive leucine-rich repeat receptor-lik...	[more]
Y1124_ARATH	7.911e-8	47.54	Probable LRR receptor-like serine/threonine-protei...	[more]

BLAST of GR406855 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9SRS9_RICCO	3.144e-26	87.69	Brassinosteroid LRR receptor kinase, putative OS=R...	[more]
D7SQY8_VITVI	1.195e-25	87.69	Whole genome shotgun sequence of line PN40024, sca...	[more]
C6ZRZ8_SOYBN	3.477e-25	84.62	Leucine-rich repeat transmembrane protein kinase O...	[more]
B9IGT6_POPTR	3.477e-25	81.54	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9I8E3_POPTR	4.541e-25	83.08	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7T4C0_VITVI	1.012e-24	86.15	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5BBX2_VITVI	1.012e-24	86.15	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9S4G0_RICCO	1.321e-24	80.00	ATP binding protein, putative OS=Ricinus communis ...	[more]
B9IQ62_POPTR	8.563e-24	80.00	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9HDJ0_POPTR	1.461e-23	80.00	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]

BLAST of GR406855 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 8


Match Name	E-value	Identity	Description
AT5G01890.1	4.643e-25	78.46	\| Symbols: \| Leucine-rich receptor-like protein k...	[more]
AT3G56370.1	5.312e-21	66.15	\| Symbols: \| Leucine-rich repeat protein kinase f...	[more]
AT3G28040.1	5.324e-13	47.62	\| Symbols: \| Leucine-rich receptor-like protein k...	[more]
AT1G62950.1	9.398e-10	49.18	\| Symbols: \| leucine-rich repeat transmembrane pr...	[more]
AT1G12460.1	6.092e-9	47.54	\| Symbols: \| Leucine-rich repeat protein kinase f...	[more]
AT4G33430.2	8.796e-8	43.10	\| Symbols: BAK1 \| BRI1-associated receptor kinase ...	[more]
AT4G33430.1	8.796e-8	43.10	\| Symbols: BAK1, RKS10, SERK3, ELG, ATSERK3, ATBAK...	[more]
AT3G55550.1	1.500e-7	43.10	\| Symbols: \| Concanavalin A-like lectin protein k...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 1..12 score: NAcoord: 32..53 score
None	No IPR available	PANTHER	PTHR23258	SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE	coord: 3..60 score: 2.9
None	No IPR available	PANTHER	PTHR23258:SF438	RECEPTOR LECTIN KINASE-LIKE PROTEIN	coord: 3..60 score: 2.9

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR406855 ID=GR406855; Name=GR406855; organism=Cicer arietinum; type=EST; length=357bp
TACAATAAAAAATTTCAACAACTTAAAAAGGAACAATAACTTTTGCAAGT
ATAATAACTTTTTAAAACTGGATTCTACTTCACCAGGTACTTTTCGTGTG
TTGTTTTTCTTTCAAACATTGTAACAAAACTCATTCTAATAACTCCTCTT
GTCCTTCTGAAGGGCACTGAATTAACTCTAATATATTGATTACTTCATCC
ATATCTGGCCTATTTGATGGAACTTGTGATGCACAAATTAATCCCAATTT
AATCACAGGAATTGCTTCTTCAGCTGCAAAATTACCTAAAAGCCTTTCAT
CAACACATTCTTCAACTTTTCCTTCTTCCAATGCCCCCCTCACCATGTCA
CAAAAAA

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