GR406965 | PulseDB

Annotated Terms

EST Overview


Name	GR406965
Unique Name	GR406965
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	693

Libraries


Library Name	Type
LIBEST_024786 JG11 Salinity-stressed chickpea root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

BLAST of GR406965 vs. SwissProt
Match: TMCO1_RAT (Transmembrane and coiled-coil domains protein 1 OS=Rattus norvegicus GN=Tmco1 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.623e-14
Identity = 35/87 (40.23%), Postives = 51/87 (58.62%), Query Frame = 2

Query:  305 YSDGLTVVGISFCTAIVCEAISWVLIYRTNSYKNLRSSIDKASKKLETMXXXXXXXXXXXXXXXXXXRVETSLKESSRDLSLFKFKS 565
            ++D L +V IS CTA++ E I+WVL+YRT+ YK L++ ++K SKKLE                    R E  LK ++RDLS+ + KS
Sbjct:    5 FADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLE-KKKETITESAGRQQKKKIERQEEKLKNNNRDLSMVRMKS 90

HSP 2 Score: 31.187 bits (69), Expect = 5.623e-14
Identity = 16/39 (41.03%), Postives = 23/39 (58.97%), Query Frame = 1

Query:  577 CSGSLCGLWIAKFAL*SKVVAKLPFQPFGLVMKMSHRGL 693
            C  +L G++ + F    +VVAKLPF P   +  +SHR L
Sbjct:   97 CFTALMGMFNSIFD--GRVVAKLPFTPLSYIQGLSHRNL 133

BLAST of GR406965 vs. SwissProt
Match: TMCO1_PONAB (Transmembrane and coiled-coil domain-containing protein 1 OS=Pongo abelii GN=TMCO1 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.623e-14
Identity = 35/87 (40.23%), Postives = 51/87 (58.62%), Query Frame = 2

Query:  305 YSDGLTVVGISFCTAIVCEAISWVLIYRTNSYKNLRSSIDKASKKLETMXXXXXXXXXXXXXXXXXXRVETSLKESSRDLSLFKFKS 565
            ++D L +V IS CTA++ E I+WVL+YRT+ YK L++ ++K SKKLE                    R E  LK ++RDLS+ + KS
Sbjct:    5 FADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLE-KKKETITESAGRQQKKKIERQEEKLKNNNRDLSMVRMKS 90

HSP 2 Score: 31.187 bits (69), Expect = 5.623e-14
Identity = 16/39 (41.03%), Postives = 23/39 (58.97%), Query Frame = 1

Query:  577 CSGSLCGLWIAKFAL*SKVVAKLPFQPFGLVMKMSHRGL 693
            C  +L G++ + F    +VVAKLPF P   +  +SHR L
Sbjct:   97 CFTALMGMFNSIFD--GRVVAKLPFTPLSYIQGLSHRNL 133

BLAST of GR406965 vs. SwissProt
Match: TMCO1_MOUSE (Transmembrane and coiled-coil domain-containing protein 1 OS=Mus musculus GN=Tmco1 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.623e-14
Identity = 35/87 (40.23%), Postives = 51/87 (58.62%), Query Frame = 2

Query:  305 YSDGLTVVGISFCTAIVCEAISWVLIYRTNSYKNLRSSIDKASKKLETMXXXXXXXXXXXXXXXXXXRVETSLKESSRDLSLFKFKS 565
            ++D L +V IS CTA++ E I+WVL+YRT+ YK L++ ++K SKKLE                    R E  LK ++RDLS+ + KS
Sbjct:    5 FADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLE-KKKETITESAGRQQKKKIERQEEKLKNNNRDLSMVRMKS 90

HSP 2 Score: 31.187 bits (69), Expect = 5.623e-14
Identity = 16/39 (41.03%), Postives = 23/39 (58.97%), Query Frame = 1

Query:  577 CSGSLCGLWIAKFAL*SKVVAKLPFQPFGLVMKMSHRGL 693
            C  +L G++ + F    +VVAKLPF P   +  +SHR L
Sbjct:   97 CFTALMGMFNSIFD--GRVVAKLPFTPLSYIQGLSHRNL 133

BLAST of GR406965 vs. SwissProt
Match: TMCO1_HUMAN (Transmembrane and coiled-coil domain-containing protein 1 OS=Homo sapiens GN=TMCO1 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.623e-14
Identity = 35/87 (40.23%), Postives = 51/87 (58.62%), Query Frame = 2

Query:  305 YSDGLTVVGISFCTAIVCEAISWVLIYRTNSYKNLRSSIDKASKKLETMXXXXXXXXXXXXXXXXXXRVETSLKESSRDLSLFKFKS 565
            ++D L +V IS CTA++ E I+WVL+YRT+ YK L++ ++K SKKLE                    R E  LK ++RDLS+ + KS
Sbjct:    5 FADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLE-KKKETITESAGRQQKKKIERQEEKLKNNNRDLSMVRMKS 90

HSP 2 Score: 31.187 bits (69), Expect = 5.623e-14
Identity = 16/39 (41.03%), Postives = 23/39 (58.97%), Query Frame = 1

Query:  577 CSGSLCGLWIAKFAL*SKVVAKLPFQPFGLVMKMSHRGL 693
            C  +L G++ + F    +VVAKLPF P   +  +SHR L
Sbjct:   97 CFTALMGMFNSIFD--GRVVAKLPFTPLSYIQGLSHRNL 133

BLAST of GR406965 vs. SwissProt
Match: TMCO1_BOVIN (Transmembrane and coiled-coil domain-containing protein 1 OS=Bos taurus GN=TMCO1 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.623e-14
Identity = 35/87 (40.23%), Postives = 51/87 (58.62%), Query Frame = 2

Query:  305 YSDGLTVVGISFCTAIVCEAISWVLIYRTNSYKNLRSSIDKASKKLETMXXXXXXXXXXXXXXXXXXRVETSLKESSRDLSLFKFKS 565
            ++D L +V IS CTA++ E I+WVL+YRT+ YK L++ ++K SKKLE                    R E  LK ++RDLS+ + KS
Sbjct:    5 FADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLE-KKKETITESAGRQQKKKIERQEEKLKNNNRDLSMVRMKS 90

HSP 2 Score: 31.187 bits (69), Expect = 5.623e-14
Identity = 16/39 (41.03%), Postives = 23/39 (58.97%), Query Frame = 1

Query:  577 CSGSLCGLWIAKFAL*SKVVAKLPFQPFGLVMKMSHRGL 693
            C  +L G++ + F    +VVAKLPF P   +  +SHR L
Sbjct:   97 CFTALMGMFNSIFD--GRVVAKLPFTPLSYIQGLSHRNL 133

BLAST of GR406965 vs. TrEMBL
Match: B7FGM9_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 9.029e-42
Identity = 78/96 (81.25%), Postives = 78/96 (81.25%), Query Frame = 2

Query:  278 MAYPFSDFKYSDGLTVVGISFCTAIVCEAISWVLIYRTNSYKNLRSSIDKASKKLETMXXXXXXXXXXXXXXXXXXRVETSLKESSRDLSLFKFKS 565
            MAYPFSDFKYSDGLTVVGISFCTAIVCEAISWVLIYRTNSYKNLRSSIDKASKKLETM                  RVETSLKESSRDLSLFKFKS
Sbjct:    1 MAYPFSDFKYSDGLTVVGISFCTAIVCEAISWVLIYRTNSYKNLRSSIDKASKKLETMKTDSNKINIKKSKTKKIDRVETSLKESSRDLSLFKFKS 96

HSP 2 Score: 46.595 bits (109), Expect = 9.029e-42
Identity = 21/22 (95.45%), Postives = 22/22 (100.00%), Query Frame = 1

Query:  628 KVVAKLPFQPFGLVMKMSHRGL 693
            KVVAKLPF+PFGLVMKMSHRGL
Sbjct:  118 KVVAKLPFKPFGLVMKMSHRGL 139

BLAST of GR406965 vs. TrEMBL
Match: C6SW57_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.174e-41
Identity = 78/96 (81.25%), Postives = 78/96 (81.25%), Query Frame = 2

Query:  278 MAYPFSDFKYSDGLTVVGISFCTAIVCEAISWVLIYRTNSYKNLRSSIDKASKKLETMXXXXXXXXXXXXXXXXXXRVETSLKESSRDLSLFKFKS 565
            MAYPFSDFKYSDGLTVVGISFCTAIVCEAISWVLIYRTNSYKNLRSSIDKASKKLETM                  RVETSLKESSRDLSLFKFKS
Sbjct:    1 MAYPFSDFKYSDGLTVVGISFCTAIVCEAISWVLIYRTNSYKNLRSSIDKASKKLETMKTDSNKINIKKSKTKKIDRVETSLKESSRDLSLFKFKS 96

HSP 2 Score: 46.2098 bits (108), Expect = 1.174e-41
Identity = 20/22 (90.91%), Postives = 22/22 (100.00%), Query Frame = 1

Query:  628 KVVAKLPFQPFGLVMKMSHRGL 693
            KVVAKLPF+PFGL+MKMSHRGL
Sbjct:  118 KVVAKLPFKPFGLIMKMSHRGL 139

BLAST of GR406965 vs. TrEMBL
Match: C6TN19_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 3.392e-41
Identity = 77/96 (80.21%), Postives = 78/96 (81.25%), Query Frame = 2

Query:  278 MAYPFSDFKYSDGLTVVGISFCTAIVCEAISWVLIYRTNSYKNLRSSIDKASKKLETMXXXXXXXXXXXXXXXXXXRVETSLKESSRDLSLFKFKS 565
            MAYPFSDFKYSDGL+VVGISFCTAIVCEAISWVLIYRTNSYKNLRSSIDKASKKLETM                  RVETSLKESSRDLSLFKFKS
Sbjct:    1 MAYPFSDFKYSDGLSVVGISFCTAIVCEAISWVLIYRTNSYKNLRSSIDKASKKLETMKTDSNKINIKKSKTKKIDRVETSLKESSRDLSLFKFKS 96

HSP 2 Score: 46.2098 bits (108), Expect = 3.392e-41
Identity = 20/22 (90.91%), Postives = 22/22 (100.00%), Query Frame = 1

Query:  628 KVVAKLPFQPFGLVMKMSHRGL 693
            KVVAKLPF+PFGL+MKMSHRGL
Sbjct:  118 KVVAKLPFKPFGLIMKMSHRGL 139

BLAST of GR406965 vs. TrEMBL
Match: B9SWJ7_RICCO (Transmembrane and coiled-coil domains protein, putative OS=Ricinus communis GN=RCOM_0279040 PE=4 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.024e-32
Identity = 67/98 (68.37%), Postives = 73/98 (74.49%), Query Frame = 2

Query:  278 MAYP--FSDFKYSDGLTVVGISFCTAIVCEAISWVLIYRTNSYKNLRSSIDKASKKLETMXXXXXXXXXXXXXXXXXXRVETSLKESSRDLSLFKFKS 565
            MA P   S FKY+D LTVVGIS CTA+VCEAISW+LIYRTNSY++L+SSIDKASKKLETM                  RVETSLKESSRDLSLFKFKS
Sbjct:    1 MATPQFLSSFKYADSLTVVGISMCTAVVCEAISWILIYRTNSYRSLKSSIDKASKKLETMKTDTTKIITKKSKTKKIDRVETSLKESSRDLSLFKFKS 98

HSP 2 Score: 38.1206 bits (87), Expect = 4.024e-32
Identity = 17/22 (77.27%), Postives = 18/22 (81.82%), Query Frame = 1

Query:  628 KVVAKLPFQPFGLVMKMSHRGL 693
            KVVAKLPF P  +V KMSHRGL
Sbjct:  120 KVVAKLPFTPIAIVRKMSHRGL 141

BLAST of GR406965 vs. TrEMBL
Match: Q6UA10_GOSBA (Fiber protein Fb27 OS=Gossypium barbadense PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.239e-32
Identity = 68/100 (68.00%), Postives = 73/100 (73.00%), Query Frame = 2

Query:  278 MAYP--FSDFKYSDGLTVVGISFCTAIVCEAISWVLIYRTNSYKNLRSSIDKASKKLETM--XXXXXXXXXXXXXXXXXXRVETSLKESSRDLSLFKFKS 565
            MA P   S F+YSD LTVV ISFCTAIVCEAISW+LIYRTNSYK+L+SSIDKA+KKLETM                    RVETSLKESSRDLSLFKFKS
Sbjct:    1 MATPQFLSSFQYSDSLTVVAISFCTAIVCEAISWLLIYRTNSYKSLKSSIDKAAKKLETMKTDQNPSKLSTKKSKTKKIDRVETSLKESSRDLSLFKFKS 100

HSP 2 Score: 43.5134 bits (101), Expect = 5.239e-32
Identity = 19/22 (86.36%), Postives = 21/22 (95.45%), Query Frame = 1

Query:  628 KVVAKLPFQPFGLVMKMSHRGL 693
            KVVAKLPF+P G+VMKMSHRGL
Sbjct:  122 KVVAKLPFKPIGIVMKMSHRGL 143

BLAST of GR406965 vs. TrEMBL
Match: B9IIB5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_814433 PE=4 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.886e-32
Identity = 63/91 (69.23%), Postives = 68/91 (74.73%), Query Frame = 2

Query:  293 SDFKYSDGLTVVGISFCTAIVCEAISWVLIYRTNSYKNLRSSIDKASKKLETMXXXXXXXXXXXXXXXXXXRVETSLKESSRDLSLFKFKS 565
            S  KYSD LTVVGIS CTAI+CE ISW+LIYRTNSYK+L+SSIDKASKKLETM                  RVE+SLKESSRDLSLFKFKS
Sbjct:    9 SSSKYSDSLTVVGISICTAIICETISWILIYRTNSYKSLKSSIDKASKKLETMKTDTAKITTKKSKTKKIDRVESSLKESSRDLSLFKFKS 99

HSP 2 Score: 41.2022 bits (95), Expect = 8.886e-32
Identity = 19/22 (86.36%), Postives = 19/22 (86.36%), Query Frame = 1

Query:  628 KVVAKLPFQPFGLVMKMSHRGL 693
            K VAKLPFQP  LVMKMSHRGL
Sbjct:  121 KAVAKLPFQPITLVMKMSHRGL 142

BLAST of GR406965 vs. TrEMBL
Match: A9PG09_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.886e-32
Identity = 63/91 (69.23%), Postives = 68/91 (74.73%), Query Frame = 2

Query:  293 SDFKYSDGLTVVGISFCTAIVCEAISWVLIYRTNSYKNLRSSIDKASKKLETMXXXXXXXXXXXXXXXXXXRVETSLKESSRDLSLFKFKS 565
            S  KYSD LTVVGIS CTAI+CE ISW+LIYRTNSYK+L+SSIDKASKKLETM                  RVE+SLKESSRDLSLFKFKS
Sbjct:    9 SSSKYSDSLTVVGISICTAIICETISWILIYRTNSYKSLKSSIDKASKKLETMKTDTAKITTKKSKTKKIDRVESSLKESSRDLSLFKFKS 99

HSP 2 Score: 41.2022 bits (95), Expect = 8.886e-32
Identity = 19/22 (86.36%), Postives = 19/22 (86.36%), Query Frame = 1

Query:  628 KVVAKLPFQPFGLVMKMSHRGL 693
            K VAKLPFQP  LVMKMSHRGL
Sbjct:  121 KAVAKLPFQPITLVMKMSHRGL 142

BLAST of GR406965 vs. TrEMBL
Match: Q4TZT9_GOSHI (Fb27 OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 7.354e-31
Identity = 66/100 (66.00%), Postives = 71/100 (71.00%), Query Frame = 2

Query:  278 MAYP--FSDFKYSDGLTVVGISFCTAIVCEAISWVLIYRTNSYKNLRSSIDKASKKLETM--XXXXXXXXXXXXXXXXXXRVETSLKESSRDLSLFKFKS 565
            MA P   S F+YSD LTVV ISFCTAIVCEAISW+LIYRTN YK+L+SSIDKA+KKLE M                    RVETSLKESSRDLSLFKFKS
Sbjct:    1 MATPQFLSSFRYSDSLTVVAISFCTAIVCEAISWLLIYRTNPYKSLKSSIDKAAKKLEIMKTDQNPSKLSTKKSKTKKIDRVETSLKESSRDLSLFKFKS 100

HSP 2 Score: 43.5134 bits (101), Expect = 7.354e-31
Identity = 19/22 (86.36%), Postives = 21/22 (95.45%), Query Frame = 1

Query:  628 KVVAKLPFQPFGLVMKMSHRGL 693
            KVVAKLPF+P G+VMKMSHRGL
Sbjct:  122 KVVAKLPFKPIGIVMKMSHRGL 143

BLAST of GR406965 vs. TrEMBL
Match: Q9FG04_ARATH (AT5g06660/F15M7_19 OS=Arabidopsis thaliana GN=At5g06660 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.247e-30
Identity = 64/94 (68.09%), Postives = 72/94 (76.60%), Query Frame = 2

Query:  290 FSDFKYSDGLTVVGISFCTAIVCEAISWVLIYRTNSYKNLRSSIDKASKKLETM--XXXXXXXXXXXXXXXXXXRVETSLKESSRDLSLFKFKS 565
            F+ FKY+D LTVVGISFCTA+VCEAISW+LIYRT+SYK+L+SSIDKASKKLETM                    RVE+SLKESSRDLSLFKFKS
Sbjct:    8 FASFKYADSLTVVGISFCTALVCEAISWILIYRTSSYKSLKSSIDKASKKLETMKTDNPSSKLTNKKSKTKKIDRVESSLKESSRDLSLFKFKS 101

HSP 2 Score: 37.7354 bits (86), Expect = 1.247e-30
Identity = 17/22 (77.27%), Postives = 18/22 (81.82%), Query Frame = 1

Query:  628 KVVAKLPFQPFGLVMKMSHRGL 693
            KVVAKLPF P  +V KMSHRGL
Sbjct:  123 KVVAKLPFHPITIVRKMSHRGL 144

BLAST of GR406965 vs. TrEMBL
Match: D7LZS7_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_908596 PE=4 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.247e-30
Identity = 64/94 (68.09%), Postives = 72/94 (76.60%), Query Frame = 2

Query:  290 FSDFKYSDGLTVVGISFCTAIVCEAISWVLIYRTNSYKNLRSSIDKASKKLETM--XXXXXXXXXXXXXXXXXXRVETSLKESSRDLSLFKFKS 565
            F+ FKY+D LTVVGISFCTA+VCEAISW+LIYRT+SYK+L+SSIDKASKKLETM                    RVE+SLKESSRDLSLFKFKS
Sbjct:    8 FASFKYADSLTVVGISFCTALVCEAISWILIYRTSSYKSLKSSIDKASKKLETMKTDNPSSKLAIKKSKTKKIDRVESSLKESSRDLSLFKFKS 101

HSP 2 Score: 37.7354 bits (86), Expect = 1.247e-30
Identity = 17/22 (77.27%), Postives = 18/22 (81.82%), Query Frame = 1

Query:  628 KVVAKLPFQPFGLVMKMSHRGL 693
            KVVAKLPF P  +V KMSHRGL
Sbjct:  123 KVVAKLPFHPITIVRKMSHRGL 144

BLAST of GR406965 vs. TAIR peptide
Match: AT5G06660.1 (| Symbols: | Protein of unknown function DUF106, transmembrane | chr5:2046863-2047453 FORWARD LENGTH=196)

HSP 1 Score: 120.553 bits (301), Expect = 8.389e-33
Identity = 64/94 (68.09%), Postives = 72/94 (76.60%), Query Frame = 2

Query:  290 FSDFKYSDGLTVVGISFCTAIVCEAISWVLIYRTNSYKNLRSSIDKASKKLETM--XXXXXXXXXXXXXXXXXXRVETSLKESSRDLSLFKFKS 565
            F+ FKY+D LTVVGISFCTA+VCEAISW+LIYRT+SYK+L+SSIDKASKKLETM                    RVE+SLKESSRDLSLFKFKS
Sbjct:    8 FASFKYADSLTVVGISFCTALVCEAISWILIYRTSSYKSLKSSIDKASKKLETMKTDNPSSKLTNKKSKTKKIDRVESSLKESSRDLSLFKFKS 101

HSP 2 Score: 37.7354 bits (86), Expect = 8.389e-33
Identity = 17/22 (77.27%), Postives = 18/22 (81.82%), Query Frame = 1

Query:  628 KVVAKLPFQPFGLVMKMSHRGL 693
            KVVAKLPF P  +V KMSHRGL
Sbjct:  123 KVVAKLPFHPITIVRKMSHRGL 144

BLAST of GR406965 vs. TAIR peptide
Match: AT3G12030.1 (| Symbols: | Protein of unknown function DUF106, transmembrane | chr3:3834465-3835055 REVERSE LENGTH=196)

HSP 1 Score: 118.627 bits (296), Expect = 3.141e-32
Identity = 63/94 (67.02%), Postives = 71/94 (75.53%), Query Frame = 2

Query:  290 FSDFKYSDGLTVVGISFCTAIVCEAISWVLIYRTNSYKNLRSSIDKASKKLETM--XXXXXXXXXXXXXXXXXXRVETSLKESSRDLSLFKFKS 565
            F+ FKY+D LTVVGISFCTA+VCEAISW+LIYRT+SYK+L+ SIDKA+KKLETM                    RVETSLKESSRDLSLFKFKS
Sbjct:    8 FASFKYADSLTVVGISFCTALVCEAISWILIYRTSSYKSLKYSIDKATKKLETMKTENPSSKLSIKKSKTKKIDRVETSLKESSRDLSLFKFKS 101

HSP 2 Score: 37.7354 bits (86), Expect = 3.141e-32
Identity = 17/22 (77.27%), Postives = 18/22 (81.82%), Query Frame = 1

Query:  628 KVVAKLPFQPFGLVMKMSHRGL 693
            KVVAKLPF P  +V KMSHRGL
Sbjct:  123 KVVAKLPFHPITIVKKMSHRGL 144

The following BLAST results are available for this feature:

BLAST of GR406965 vs. SwissProt
BLAST of GR406965 vs. TrEMBL
BLAST of GR406965 vs. TAIR peptide

BLAST of GR406965 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 5


Match Name	E-value	Identity	Description
TMCO1_RAT	5.623e-14	40.23	Transmembrane and coiled-coil domains protein 1 OS...	[more]
TMCO1_PONAB	5.623e-14	40.23	Transmembrane and coiled-coil domain-containing pr...	[more]
TMCO1_MOUSE	5.623e-14	40.23	Transmembrane and coiled-coil domain-containing pr...	[more]
TMCO1_HUMAN	5.623e-14	40.23	Transmembrane and coiled-coil domain-containing pr...	[more]
TMCO1_BOVIN	5.623e-14	40.23	Transmembrane and coiled-coil domain-containing pr...	[more]

BLAST of GR406965 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B7FGM9_MEDTR	9.029e-42	81.25	Putative uncharacterized protein OS=Medicago trunc...	[more]
C6SW57_SOYBN	1.174e-41	81.25	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6TN19_SOYBN	3.392e-41	80.21	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9SWJ7_RICCO	4.024e-32	68.37	Transmembrane and coiled-coil domains protein, put...	[more]
Q6UA10_GOSBA	5.239e-32	68.00	Fiber protein Fb27 OS=Gossypium barbadense PE=2 SV...	[more]
B9IIB5_POPTR	8.886e-32	69.23	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A9PG09_POPTR	8.886e-32	69.23	Putative uncharacterized protein OS=Populus tricho...	[more]
Q4TZT9_GOSHI	7.354e-31	66.00	Fb27 OS=Gossypium hirsutum PE=2 SV=1	[more]
Q9FG04_ARATH	1.247e-30	68.09	AT5g06660/F15M7_19 OS=Arabidopsis thaliana GN=At5g...	[more]
D7LZS7_ARALY	1.247e-30	68.09	Putative uncharacterized protein OS=Arabidopsis ly...	[more]

BLAST of GR406965 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT5G06660.1	8.389e-33	68.09	\| Symbols: \| Protein of unknown function DUF106, ...	[more]
AT3G12030.1	3.141e-32	67.02	\| Symbols: \| Protein of unknown function DUF106, ...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 55..63 score
None	No IPR available	SEG	seg	seg	coord: 8..21 score: NAcoord: 80..97 score: NAcoord: 118..136 score
None	No IPR available	SEG	seg	seg	coord: 32..50 score
None	No IPR available	SEG	seg	seg	coord: 31..43 score: NAcoord: 65..87 score
IPR002809	Protein of unknown function DUF106, transmembrane	PFAM	PF01956	DUF106	coord: 35..137 score: 4.2
IPR008559	Uncharacterised conserved protein UCP023322, transmembrane eukaryotic	PANTHER	PTHR20917	PNAS-RELATED	coord: 21..139 score: 3.6

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR406965 ID=GR406965; Name=GR406965; organism=Cicer arietinum; type=EST; length=693bp
GACTGTCGTCAGTGCAATCGAATCGGAGACACTTCACGAACCCTAATTAG
ATTCAAAACAACCAAAACCCACCGTTGTCAACCTCAATTCCATTATTCTC
TTCGTCGGCGTCACGATTCTCGGCAATCGTAGGTCGGAACTTCGCGAATC
ACAGAGCTGTGAACCTCCGTTCGCGTGATTTGTCTCTGCGATTCCTCAAG
GTTGTGGAAGTTAAAATTTTTTTGCTCAAGATCGAAGTCTGCTTTCTCTG
TTTCTCATAGATTTTTCTTTTCCTTCGATGGCATATCCATTCTCAGATTT
CAAGTACTCCGATGGCCTCACTGTGGTGGGTATCTCCTTTTGTACGGCTA
TTGTTTGTGAGGCCATCTCATGGGTTCTTATTTACCGCACCAATTCTTAC
AAGAACCTCCGGTCCTCCATTGATAAAGCCTCCAAGAAACTCGAGACTAT
GAAGACAGACAGCAACAAAATCAACATTAAGAAGTCCAAGACCAAAAAAA
TTGACCGTGTTGAGACAAGCCTCAAAGAATCCAGCCGTGACTTGTCTCTT
TTCAAGTTCAAATCTGGTGGTGTGGTTGCTCTGGTTCTCTTTGTGGTCTT
TGGATTGCTAAATTCGCTCTTTGAAGCAAGGTAGTTGCCAAATTGCCCTT
CCAGCCTTTTGGGCTTGTTATGAAGATGAGCCATCGAGGGTTG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
IPR002809	EMC3/TMCO1
IPR008559	TMCO1