GR407878
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR407878 vs. TrEMBL
Match: C6T061_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 7.920e-30 Identity = 73/117 (62.39%), Postives = 78/117 (66.67%), Query Frame = -1 Query: 40 SPARSLPHLKLGFPSKPQNPFIXXXXXXXXXF--RCISFRRLQTNQKLLTVFATNPNTGGEKFANEGSDVKETSNASQGPPFLTILAGIFVFFLVCWVIGSIGMWLISLIVNVPPPK 384 S A PHL LGFPS PQ I RC F RL NQ+L+TVFATNPN+ GEK EGSDV ETSNA+QGPP LTILAG FV F+VCW I SI WLISLIVNVP PK Sbjct: 7 SHAAPQPHLTLGFPSPPQFLSIAAPKFSPSSSTIRCKGFSRLIVNQRLVTVFATNPNSVGEKSPTEGSDVNETSNAAQGPPLLTILAGFFVLFVVCWSIWSIITWLISLIVNVPAPK 123
BLAST of GR407878 vs. TrEMBL
Match: D7TNU0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_156.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00001359001 PE=4 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.960e-12 Identity = 46/110 (41.82%), Postives = 59/110 (53.64%), Query Frame = -1 Query: 40 LKLGFP---SKPQNPFIXXXXXXXXXFRCISFRRLQTNQKLLTVFATNPNTGGEKFANEGSDVKETSNASQGPPFLTILAGIFVFFLVCWVIGSIGMWLISLIVNVPPPK 360 L LGF S PQ P + R + RL+ Q++ VFA+N G D K+ + +QGPPFLTILAG+ +F LV W++GSI MWL LIV PP K Sbjct: 17 LNLGFHRAISSPQLPPVSNFPCTPLSSRFNNELRLRVRQRMAVVFASNT------VYPVGGDSKKEKSDAQGPPFLTILAGLLLFLLVFWLLGSIVMWLFGLIVKSPPSK 120
BLAST of GR407878 vs. TrEMBL
Match: A5AGI7_VITVI (Citrate synthase OS=Vitis vinifera GN=VITISV_022331 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.960e-12 Identity = 46/110 (41.82%), Postives = 59/110 (53.64%), Query Frame = -1 Query: 40 LKLGFP---SKPQNPFIXXXXXXXXXFRCISFRRLQTNQKLLTVFATNPNTGGEKFANEGSDVKETSNASQGPPFLTILAGIFVFFLVCWVIGSIGMWLISLIVNVPPPK 360 L LGF S PQ P + R + RL+ Q++ VFA+N G D K+ + +QGPPFLTILAG+ +F LV W++GSI MWL LIV PP K Sbjct: 787 LNLGFHRAISSPQLPPVSNFPCTPLSSRFNNELRLRVRQRMAVVFASNT------VYPVGGDSKKEKSDAQGPPFLTILAGLLLFLLVFWLLGSIVMWLFGLIVKSPPSK 890 The following BLAST results are available for this feature:
BLAST of GR407878 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 3
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR407878 ID=GR407878; Name=GR407878; organism=Cicer arietinum; type=EST; length=384bpback to top |