GR409555

EST Overview
NameGR409555
Unique NameGR409555
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length690
Libraries
Library NameType
LIBEST_024779 ICC1882 Slow drought stressed root cDNA librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR409555 vs. TrEMBL
Match: B9T2R8_RICCO (Vacuolar protein sorting protein, putative OS=Ricinus communis GN=RCOM_0594070 PE=4 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.361e-23
Identity = 75/166 (45.18%), Postives = 89/166 (53.61%), Query Frame = -1
Query:  190 QVVKTFFLKILFFGKTEIKFCKVFPSF*AGGEARPGPF*GLYILPEDSGADICRALLPGGSPMEFQGICEFKGF*KADPQSILEAFNNQGLGIKQTQXXXXXXXXXXXXXXXXXXXXVGLVASREDVLTRXXXXXXXXAPTGFQRFLALTGAAKDRKGGPFRKLFN 687
            Q VKT  L+I   G+ +      +  F +   ++      + + P DS AD  RALLP G+PMEFQ I E KG  KAD QSIL+ FN  G  I  TQ                    +G +ASREDVLTR        A TGF+RFLALT AAKDRK GPFRKLFN
Sbjct:  653 QAVKTILLEIPSLGR-QTSSAASYSKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRILELKGLKKADQQSILDDFNKHGPAI--TQPSIASSVGPTAPAAAITNASLGFIASREDVLTRAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFN 815          
BLAST of GR409555 vs. TrEMBL
Match: D7T427_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_18.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00016094001 PE=4 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.278e-22
Identity = 73/173 (42.20%), Postives = 90/173 (52.02%), Query Frame = -1
Query:  190 QVVKTFFLKILFFGKTEIKFCKVFPSF*AGGEARPGPF*GLYILPEDSGADICRALLPGGSPMEFQGICEFKGF*KADPQSILEAFNNQGLGIKQTQXXXXXXXXXXXXXXXXXXXXV-------GLVASREDVLTRXXXXXXXXAPTGFQRFLALTGAAKDRKGGPFRKLFN 687
            Q VKT  L+I   G+ +      +  F +   ++      + + P DS A+  RALLP G+P+EFQ I E KG  KAD QSIL+ FN +G GI Q                              G++ASREDVLTR        A TGF+RFLALT AAKDRK GPFRKLFN
Sbjct:  654 QAVKTILLEIPSLGR-QTSGAASYSKFVSREMSKAEALLKVILSPVDSVANTYRALLPEGTPLEFQRILELKGLKKADQQSILDDFNKRGSGITQPSITATPVVQATPTAPVAPAALTVANPASVGVIASREDVLTRAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFN 825          
BLAST of GR409555 vs. TrEMBL
Match: B9IHF5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_734621 PE=4 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.195e-20
Identity = 71/168 (42.26%), Postives = 85/168 (50.60%), Query Frame = -1
Query:  190 QVVKTFFLKILFFGKTEIKFCKVFPSF*AGGEARPGPF*GLYILPEDSGADICRALLPGGSPMEFQGICEFKGF*KADPQSILEAFNNQGLGIKQTQXXXXXXXXXXXXXXXXXXXXV--GLVASREDVLTRXXXXXXXXAPTGFQRFLALTGAAKDRKGGPFRKLFN 687
            Q VKT  L++   G+ +      +  F +   ++      + + P DS AD  RALLP G+PMEFQ I E KG  KAD Q+IL+ FN     I Q                         G  ASREDVLTR        A TGF+RFLALT AAKDRK GPFRKLFN
Sbjct:  406 QAVKTILLEVPSLGR-QTSSAASYSKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRILELKGLKKADQQTILDDFNKHSPAITQPSIAPSVAPAAPLVPATPAIANSTAGFSASREDVLTRAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFN 572          
BLAST of GR409555 vs. TrEMBL
Match: Q9LPS3_ARATH (F11F12.15 protein OS=Arabidopsis thaliana GN=F11F12.15 PE=4 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.493e-18
Identity = 59/127 (46.46%), Postives = 67/127 (52.76%), Query Frame = -1
Query:  190 PEDSGADICRALLPGGSPMEFQGICEFKGF*KADPQSILEAFNNQGLGIKQ-----TQXXXXXXXXXXXXXXXXXXXXVGLVASREDVLTRXXXXXXXXAPTGFQRFLALTGAAKDRKGGPFRKLFN 555
            P DS AD  RAL P G+PMEFQ I E KG  KAD QSIL+ FN  G G  Q                            G +A+ EDVLTR        A TGF++F+ALT AAKDRK GP R+LFN
Sbjct:  727 PIDSVADTYRALFPEGTPMEFQRILELKGLKKADQQSILDDFNKHGPGFTQQSVAAAMPQPMPTPPAPPLAITNPATAAGFIANSEDVLTRAAALGRGAASTGFKKFIALTEAAKDRKDGPLRRLFN 853          
BLAST of GR409555 vs. TrEMBL
Match: Q9C6Q3_ARATH (Putative uncharacterized protein F17J6.4 OS=Arabidopsis thaliana GN=F17J6.4 PE=4 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.493e-18
Identity = 59/127 (46.46%), Postives = 67/127 (52.76%), Query Frame = -1
Query:  190 PEDSGADICRALLPGGSPMEFQGICEFKGF*KADPQSILEAFNNQGLGIKQ-----TQXXXXXXXXXXXXXXXXXXXXVGLVASREDVLTRXXXXXXXXAPTGFQRFLALTGAAKDRKGGPFRKLFN 555
            P DS AD  RAL P G+PMEFQ I E KG  KAD QSIL+ FN  G G  Q                            G +A+ EDVLTR        A TGF++F+ALT AAKDRK GP R+LFN
Sbjct:  713 PIDSVADTYRALFPEGTPMEFQRILELKGLKKADQQSILDDFNKHGPGFTQQSVAAAMPQPMPTPPAPPLAITNPATAAGFIANSEDVLTRAAALGRGAASTGFKKFIALTEAAKDRKDGPLRRLFN 839          
BLAST of GR409555 vs. TrEMBL
Match: Q0WQF4_ARATH (Putative uncharacterized protein At1g50500 OS=Arabidopsis thaliana GN=At1g50500 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.493e-18
Identity = 59/127 (46.46%), Postives = 67/127 (52.76%), Query Frame = -1
Query:  190 PEDSGADICRALLPGGSPMEFQGICEFKGF*KADPQSILEAFNNQGLGIKQ-----TQXXXXXXXXXXXXXXXXXXXXVGLVASREDVLTRXXXXXXXXAPTGFQRFLALTGAAKDRKGGPFRKLFN 555
            P DS AD  RAL P G+PMEFQ I E KG  KAD QSIL+ FN  G G  Q                            G +A+ EDVLTR        A TGF++F+ALT AAKDRK GP R+LFN
Sbjct:  701 PIDSVADTYRALFPEGTPMEFQRILELKGLKKADQQSILDDFNKHGPGFTQQSVAAAMPQPMPTPPAPPLAITNPATAAGFIANSEDVLTRAAALGRGAASTGFKKFIALTEAAKDRKDGPLRRLFN 827          
BLAST of GR409555 vs. TrEMBL
Match: D7KGP5_ARALY (Heat-intolerant 1 OS=Arabidopsis lyrata subsp. lyrata GN=HIT1 PE=4 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.493e-18
Identity = 59/127 (46.46%), Postives = 67/127 (52.76%), Query Frame = -1
Query:  190 PEDSGADICRALLPGGSPMEFQGICEFKGF*KADPQSILEAFNNQGLGIKQ-----TQXXXXXXXXXXXXXXXXXXXXVGLVASREDVLTRXXXXXXXXAPTGFQRFLALTGAAKDRKGGPFRKLFN 555
            P DS AD  RAL P G+PMEFQ I E KG  KAD QSIL+ FN  G G  Q                            G +A+ EDVLTR        A TGF++F+ALT AAKDRK GP R+LFN
Sbjct:  701 PIDSVADTYRALFPEGTPMEFQRILELKGLKKADQQSILDDFNKHGPGFTQQSVAAAMPQPMPTPPAPPLAITNPATAAGFIANSEDVLTRAAALGRGAASTGFKKFIALTEAAKDRKDGPLRRLFN 827          
BLAST of GR409555 vs. TrEMBL
Match: Q5N723_ORYSJ (Os01g0906200 protein OS=Oryza sativa subsp. japonica GN=B1417F08.6 PE=4 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.553e-18
Identity = 69/180 (38.33%), Postives = 84/180 (46.67%), Query Frame = -1
Query:  190 QVVKTFFLKILFFGKTEIKFCKVFPSF*AGGEARPGPF*GLYILPEDSGADICRALLPGGSPMEFQGICEFKGF*KADPQSILEAFNNQGLGIKQ--------------TQXXXXXXXXXXXXXXXXXXXXVGLVASREDVLTRXXXXXXXXAPTGFQRFLALTGAAKDRKGGPFRKLFN 687
            Q VKT  L I   GK        +  F +   ++      + + P DS A+  RALLP G+P+EFQ I + KG  KAD Q+ILE FN     IK               +                      G +A+REDVL R        A TGF+RFLALT AAKDRK GPFRKLFN
Sbjct:  220 QAVKTILLDIPSLGKQSTAAAS-YSKFVSREMSKAEALLKVILSPVDSVANTYRALLPEGTPLEFQRILDLKGLKKADQQTILEDFNKHSPAIKHPAVAPTVAPPVATSSAHHIAPVTTPTVSTTPSMATLTGALANREDVLARAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFN 398          
BLAST of GR409555 vs. TrEMBL
Match: B9EVG3_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_04466 PE=4 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.553e-18
Identity = 69/180 (38.33%), Postives = 84/180 (46.67%), Query Frame = -1
Query:  190 QVVKTFFLKILFFGKTEIKFCKVFPSF*AGGEARPGPF*GLYILPEDSGADICRALLPGGSPMEFQGICEFKGF*KADPQSILEAFNNQGLGIKQ--------------TQXXXXXXXXXXXXXXXXXXXXVGLVASREDVLTRXXXXXXXXAPTGFQRFLALTGAAKDRKGGPFRKLFN 687
            Q VKT  L I   GK        +  F +   ++      + + P DS A+  RALLP G+P+EFQ I + KG  KAD Q+ILE FN     IK               +                      G +A+REDVL R        A TGF+RFLALT AAKDRK GPFRKLFN
Sbjct:  655 QAVKTILLDIPSLGKQSTAAAS-YSKFVSREMSKAEALLKVILSPVDSVANTYRALLPEGTPLEFQRILDLKGLKKADQQTILEDFNKHSPAIKHPAVAPTVAPPVATSSAHHIAPVTTPTVSTTPSMATLTGALANREDVLARAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFN 833          
BLAST of GR409555 vs. TrEMBL
Match: B8A7T6_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_04842 PE=4 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.553e-18
Identity = 69/180 (38.33%), Postives = 84/180 (46.67%), Query Frame = -1
Query:  190 QVVKTFFLKILFFGKTEIKFCKVFPSF*AGGEARPGPF*GLYILPEDSGADICRALLPGGSPMEFQGICEFKGF*KADPQSILEAFNNQGLGIKQ--------------TQXXXXXXXXXXXXXXXXXXXXVGLVASREDVLTRXXXXXXXXAPTGFQRFLALTGAAKDRKGGPFRKLFN 687
            Q VKT  L I   GK        +  F +   ++      + + P DS A+  RALLP G+P+EFQ I + KG  KAD Q+ILE FN     IK               +                      G +A+REDVL R        A TGF+RFLALT AAKDRK GPFRKLFN
Sbjct:  655 QAVKTILLDIPSLGKQSTAAAS-YSKFVSREMSKAEALLKVILSPVDSVANTYRALLPEGTPLEFQRILDLKGLKKADQQTILEDFNKHSPAIKHPAVAPTVAPPVATSSAHHIAPVTTPTVSTTPSMATLTGALANREDVLARAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFN 833          
BLAST of GR409555 vs. TAIR peptide
Match: AT1G50500.2 (| Symbols: HIT1 | Membrane trafficking VPS53 family protein | chr1:18708217-18715597 REVERSE LENGTH=847)

HSP 1 Score: 96.2857 bits (238), Expect = 1.691e-20
Identity = 59/127 (46.46%), Postives = 67/127 (52.76%), Query Frame = -1
Query:  190 PEDSGADICRALLPGGSPMEFQGICEFKGF*KADPQSILEAFNNQGLGIKQ-----TQXXXXXXXXXXXXXXXXXXXXVGLVASREDVLTRXXXXXXXXAPTGFQRFLALTGAAKDRKGGPFRKLFN 555
            P DS AD  RAL P G+PMEFQ I E KG  KAD QSIL+ FN  G G  Q                            G +A+ EDVLTR        A TGF++F+ALT AAKDRK GP R+LFN
Sbjct:  720 PIDSVADTYRALFPEGTPMEFQRILELKGLKKADQQSILDDFNKHGPGFTQQSVAAAMPQPMPTPPAPPLAITNPATAAGFIANSEDVLTRAAALGRGAASTGFKKFIALTEAAKDRKDGPLRRLFN 846          
BLAST of GR409555 vs. TAIR peptide
Match: AT1G50500.1 (| Symbols: HIT1, ATVPS53, VPS53 | Membrane trafficking VPS53 family protein | chr1:18708217-18715597 REVERSE LENGTH=828)

HSP 1 Score: 96.2857 bits (238), Expect = 1.691e-20
Identity = 59/127 (46.46%), Postives = 67/127 (52.76%), Query Frame = -1
Query:  190 PEDSGADICRALLPGGSPMEFQGICEFKGF*KADPQSILEAFNNQGLGIKQ-----TQXXXXXXXXXXXXXXXXXXXXVGLVASREDVLTRXXXXXXXXAPTGFQRFLALTGAAKDRKGGPFRKLFN 555
            P DS AD  RAL P G+PMEFQ I E KG  KAD QSIL+ FN  G G  Q                            G +A+ EDVLTR        A TGF++F+ALT AAKDRK GP R+LFN
Sbjct:  701 PIDSVADTYRALFPEGTPMEFQRILELKGLKKADQQSILDDFNKHGPGFTQQSVAAAMPQPMPTPPAPPLAITNPATAAGFIANSEDVLTRAAALGRGAASTGFKKFIALTEAAKDRKDGPLRRLFN 827          
BLAST of GR409555 vs. TAIR peptide
Match: AT1G50970.1 (| Symbols: | Membrane trafficking VPS53 family protein | chr1:18896323-18900268 FORWARD LENGTH=569)

HSP 1 Score: 66.2402 bits (160), Expect = 1.874e-11
Identity = 51/118 (43.22%), Postives = 58/118 (49.15%), Query Frame = -1
Query:  187 DICRALLPGGSPMEFQGICEFKGF*KADPQSILEAFNNQGLGIKQ-TQXXXXXXXXXXXXXXXXXXXXVGLVASREDVLTRXXXXXXXXAPTGFQRFLALTGAAKDRKGGPFRKLFNP 537
            D  RAL P  +PMEFQ I   KG  KA+ QSIL+ FNN    I Q +                     V   A+ E+VLTR        A T F +  ALTGAAKDR   PFRKLFNP
Sbjct:  459 DTYRALFPEETPMEFQRILVLKGLTKAEQQSILDDFNNHSSRITQLSVAAKTPEAHALPLALTNVAPAVRFKANSEEVLTR----AASAATTSFMKLYALTGAAKDR---PFRKLFNP 569          
The following BLAST results are available for this feature:
BLAST of GR409555 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9T2R8_RICCO3.361e-2345.18Vacuolar protein sorting protein, putative OS=Rici... [more]
D7T427_VITVI8.278e-2242.20Whole genome shotgun sequence of line PN40024, sca... [more]
B9IHF5_POPTR1.195e-2042.26Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q9LPS3_ARATH2.493e-1846.46F11F12.15 protein OS=Arabidopsis thaliana GN=F11F1... [more]
Q9C6Q3_ARATH2.493e-1846.46Putative uncharacterized protein F17J6.4 OS=Arabid... [more]
Q0WQF4_ARATH2.493e-1846.46Putative uncharacterized protein At1g50500 OS=Arab... [more]
D7KGP5_ARALY2.493e-1846.46Heat-intolerant 1 OS=Arabidopsis lyrata subsp. lyr... [more]
Q5N723_ORYSJ5.553e-1838.33Os01g0906200 protein OS=Oryza sativa subsp. japoni... [more]
B9EVG3_ORYSJ5.553e-1838.33Putative uncharacterized protein OS=Oryza sativa s... [more]
B8A7T6_ORYSI5.553e-1838.33Putative uncharacterized protein OS=Oryza sativa s... [more]
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BLAST of GR409555 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT1G50500.21.691e-2046.46| Symbols: HIT1 | Membrane trafficking VPS53 famil... [more]
AT1G50500.11.691e-2046.46| Symbols: HIT1, ATVPS53, VPS53 | Membrane traffic... [more]
AT1G50970.11.874e-1143.22| Symbols: | Membrane trafficking VPS53 family pr... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 2..14
score: NAcoord: 80..100
score
NoneNo IPR availableSEGsegsegcoord: 32..49
score
NoneNo IPR availableSEGsegsegcoord: 23..43
score
NoneNo IPR availableSEGsegsegcoord: 88..99
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR409555 ID=GR409555; Name=GR409555; organism=Cicer arietinum; type=EST; length=690bp
CCTGCAAATTTGTAAAAAAAATAATTGCAAAATCAACTTTCATTTGATTG
GGTGAATTACAAATGAACCTGATATTAAACTTACATAAAGAATCTAGGAG
AAAAAAAGCAAAAAGAAACAGACAACTACATCAACAAAAAATTACAAGCT
GGGAAAAAAAATTGGGTTGTATTACTCCCTTCATTATGGATTAAAGAGTT
TCCGGAAAGGCCCACCCTTCCTGTCTTTTGCAGCTCCAGTTAATGCTAGG
AACCGCTGGAACCCTGTGGGGGCAGCTCCTCAACCAAGTGCAGCGGCCCT
CGTAAGAACATCCTCCCGTGAAGCTACAAGCCCAACAGCGGTGGGATTAG
GTACTACAGGAGCTACTGAAGGAGCTGGCACCTTTGCAGGCGCAACCTGA
GTTTGCTTAATTCCAAGCCCTTGGTTGTTAAAGGCCTCGAGTATGCTTTG
TGGATCAGCTTTTTAAAAACCCTTAAACTCACATATCCCCTGAAATTCCA
TGGGAGAACCCCCGGGTAATAGAGCCCGGCAAATATCCGCTCCCGAATCC
TCTGGAAGAATGTATAACCCTCAAAAAGGCCCCGGCCTTGCTTCTCCCCC
GGCTTAAAAACTTGGAAAAACTTTGCAAAACTTGATTTCTGTCTTCCCAA
AAAAAAGAATTTTCAAAAAGAATGTTTTGACAACTTGGGG
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