GR410078

EST Overview
NameGR410078
Unique NameGR410078
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length578
Libraries
Library NameType
LIBEST_024779 ICC1882 Slow drought stressed root cDNA librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
[Close]
BLAST of GR410078 vs. TrEMBL
Match: A3FF19_PEA (Phloem specific protein (Fragment) OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.242e-14
Identity = 53/123 (43.09%), Postives = 67/123 (54.47%), Query Frame = -1 
Query:  144 RPEVYSIHISGLGREPSVFTDVPGCPKVQVAFNKRRVFYEDDEMEAVRYKEGSGQGIHHHLHNNNPEILCEKVEVIRYEEEPFQVGYREEVI*EDV----------*RIRPGGLELHKWKTYR 482
            R + Y  HI+G+ REPSV +D    P  ++AFNKR V+   DE+E          G H H H++NPEI+ E+VEV+ YE  P    Y  EVI E+            R RP GL L KWKTYR
Sbjct:   14 RSQDYHNHIAGVRREPSVLSDFDRYPNAEMAFNKRVVY---DEVE----------GSHRHHHHHNPEIV-ERVEVVEYERVPEVRPYGGEVIYEEYMDVETNQYNPRRNRPNGLGLQKWKTYR 122
[Close]
BLAST of GR410078 vs. TrEMBL
Match: Q41666_VICFA (Phloem specific protein OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.577e-13
Identity = 52/129 (40.31%), Postives = 68/129 (52.71%), Query Frame = -1 
Query:  144 NPREWCRPEVYSIHISGLGREPSVFTDVPGCPKVQVAFNKRRVFYEDDEMEAVRYKEGSGQGIHHHLHNNNPEILCEKVEVIRYEEEPFQVGYREEVI*EDV----------*RIRPGGLELHKWKTYR 500
            N     R + Y  HI+G+ REPSV ++    P  ++AFNKR V+   DE+E          G H H H++NPE++ E+VEV+ YE  P    Y  EVI E+            R RP GL L KWKTYR
Sbjct:   28 NKERMLRSQDYHNHIAGVRREPSVLSEFDRYPNAEMAFNKRVVY---DEIE----------GSHRHHHHHNPEVV-ERVEVVEYERVPEVRPYGGEVIYEEYMDVETSQYNPRRNRPNGLGLQKWKTYR 142
The following BLAST results are available for this feature:
BLAST of GR410078 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 2
Match NameE-valueIdentityDescription
A3FF19_PEA9.242e-1443.09Phloem specific protein (Fragment) OS=Pisum sativu... [more]
Q41666_VICFA1.577e-1340.31Phloem specific protein OS=Vicia faba PE=2 SV=1[more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 58..65
score
NoneNo IPR availableSEGsegsegcoord: 86..100
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR410078 ID=GR410078; Name=GR410078; organism=Cicer arietinum; type=EST; length=578bp
ACATAGAAATATATGGTTTATTAATAAAATGGATACATGATAACGGGGGG
CTAACCCGGAATTTATTTAATAAAAACACCTGAGTGATGTTTTGTTAAAA
TATATAGCCTGCCTAGCAAAATAGCTATAGCAGCCGCTTATGGCCTGTAT
GTCTTCCATTTGTGCAACTCAAGACCGCCTGGGCGGATCCTTCAAACATC
TTCCTATATCACTTCTTCACGATATCCTACCTGAAATGGTTCTTCTTCAT
ACCTGATCACTTCAACCTTCTCACAGAGGATCTCTGGGTTGTTGTTATGG
AGGTGGTGGTGAATGCCTTGACCAGATCCTTCCTTGTATCGAACAGCTTC
CATCTCATCATCCTCATAAAAAACCCGCCTCTTGTTGAAGGCCACTTGAA
CCTTTGGGCAACCAGGGACATCAGTGAAAACACTTGGCTCTCTACCGAGA
CCTGAAATGTGAATGGAGTAAACCTCCGGTCTACACCATTCTCTTGGATT
CTTGTTTTGAAGACATACCAGTACCGGAAGAAGCACCCCCGCGTACTCTG
CGCTGATCCCACTGCTTAAACACAAGCC
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