GR420895
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR420895 vs. TrEMBL
Match: Q8LDL6_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.521e-14 Identity = 67/171 (39.18%), Postives = 85/171 (49.71%), Query Frame = 3 Query: 60 HWFCANNTPNXXXXXXXXXXXXXQPCKCPL---PFSTNVVDLLHSQSNNNPSLITVFFSLKFK---LGHQSNSPFSFSFDRDYLIFQRLFWDFFDPSRSL*SSPLVM---LQFWCFYSAIYI----DIIHLEPSEGVLGIIGLLDDH*SSLLIVLHVAALYRSVLYRRHGG 533 HWFC N +PCKCPL P S V +S N+ ++ V ++ G QS+ D +L+ +RL + DP R+L PLV+ + SAIYI DII EGVLG+IGLLDD +L+ LHVAALYRSVLY RHGG Sbjct: 27 HWFCGN-----CIMLVWRHGSTLRPCKCPLCRRPISLLVPSEETVRSRNDATVSEVLHDVETYNRVFGGQSSGLIQRMQDLPFLL-RRLLREMMDPQRTL---PLVIRARVYIALILSAIYIISPIDII----PEGVLGVIGLLDDLLIALICFLHVAALYRSVLYSRHGG 184 HSP 2 Score: 22.7126 bits (47), Expect = 2.521e-14 Identity = 6/13 (46.15%), Postives = 10/13 (76.92%), Query Frame = 1 Query: 22 PQDIPCQVCHGNF 60 P++ C +CHG+F Sbjct: 5 PENEVCSICHGHF 17
BLAST of GR420895 vs. TrEMBL
Match: Q0WWX8_ARATH (Putative uncharacterized protein At1g22510 OS=Arabidopsis thaliana GN=At1g22510 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 5.697e-14 Identity = 72/191 (37.70%), Postives = 93/191 (48.69%), Query Frame = 3 Query: 6 NDLCSTAG--YSMSSLSWKFHWFCANNTPNXXXXXXXXXXXXXQPCKCPL---PFSTNVVDLLHSQSNNNPSLITVFFSLKFK---LGHQSNSPFSFSFDRDYLIFQRLFWDFFDPSRSL*SSPLVM---LQFWCFYSAIYI----DIIHLEPSEGVLGIIGLLDDH*SSLLIVLHVAALYRSVLYRRHGG 533 N+LCS ++ S HWFC N +PCKCPL P S V +S N+ ++ V ++ G QS+ D +L+ +RL + DP R+L PLV+ + SAIYI DII EGVLG+IGLLDD +L+ LHVAALYRSVLY RHGG Sbjct: 7 NELCSICHGHFNAPCQSNCSHWFCGN-----CIMLVWRHGSTLRPCKCPLCRRPISLLVPSEETVRSRNDATVSEVLHDVETYNRVFGGQSSGLIQRMQDLPFLL-RRLLREMMDPQRTL---PLVIRARVYIALILSAIYIISPIDII----PEGVLGVIGLLDDLLIALICFLHVAALYRSVLYSRHGG 184
BLAST of GR420895 vs. TrEMBL
Match: D7KLS6_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_889762 PE=4 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.665e-13 Identity = 66/171 (38.60%), Postives = 84/171 (49.12%), Query Frame = 3 Query: 60 HWFCANNTPNXXXXXXXXXXXXXQPCKCPL---PFSTNVVDLLHSQSNNNPSLITVFFSLKFK---LGHQSNSPFSFSFDRDYLIFQRLFWDFFDPSRSL*SSPLVM---LQFWCFYSAIYI----DIIHLEPSEGVLGIIGLLDDH*SSLLIVLHVAALYRSVLYRRHGG 533 HWFC N +PCKCPL P S V +S N+ ++ V ++ G QS+ + R L+ +L + DP R+L PLV+ + SAIYI DII EGVLG+IGLLDD +L+ LHVAALYRSVLY RHGG Sbjct: 27 HWFCGN-----CIMLVWRHGSTLRPCKCPLCRRPISLLVPSEETVRSRNDATVSEVLHDVETYNRVFGGQSSGLIQDA--RSSLLTPKLLREMMDPRRTL---PLVIRARVYIALILSAIYIISPIDII----PEGVLGVIGLLDDLLIALICFLHVAALYRSVLYFRHGG 183 HSP 2 Score: 22.7126 bits (47), Expect = 2.665e-13 Identity = 6/13 (46.15%), Postives = 10/13 (76.92%), Query Frame = 1 Query: 22 PQDIPCQVCHGNF 60 P++ C +CHG+F Sbjct: 5 PENEVCSICHGHF 17
BLAST of GR420895 vs. TrEMBL
Match: D7KZA5_ARALY (Zinc finger family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_895067 PE=4 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.828e-13 Identity = 72/191 (37.70%), Postives = 93/191 (48.69%), Query Frame = 3 Query: 6 NDLCST--AGYSMSSLSWKFHWFCANNTPNXXXXXXXXXXXXXQPCKCPL---PFSTNVVDLLHSQSNNNPSLITVFFSLKFK---LGHQSNSPFSFSFDRDYLIFQRLFWDFFDPSRSL*SSPLVM---LQFWCFYSAIYI----DIIHLEPSEGVLGIIGLLDDH*SSLLIVLHVAALYRSVLYRRHGG 533 NDLCS + ++ + HWFC N QPCKCPL P S V + N+ ++ V +L+ G +S S D +L+ +RL + DP R+L PLV+ + SAIYI DII EGVLGI+GLLDD +L+ LHVAALYRSVLY RH G Sbjct: 7 NDLCSICHSHFTAPCQANCSHWFCGN-----CIMQVWRHGSTLQPCKCPLCRRPISLLVPSEDTIRDRNDSTVADVLGNLETYNRLFGGRSTSLVQRMQDLPFLL-RRLLREMMDPQRTL---PLVIRARVYIAMILSAIYIISPIDII----PEGVLGIVGLLDDLLIALIAFLHVAALYRSVLYFRHAG 184
BLAST of GR420895 vs. TrEMBL
Match: D7U9D3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_41.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00026089001 PE=4 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 4.083e-12 Identity = 66/188 (35.11%), Postives = 89/188 (47.34%), Query Frame = 3 Query: 6 NDLCSTA--GYSMSSLSWKFHWFCANNTPNXXXXXXXXXXXXXQPCKCPLPFS--TNVVDLLHSQSN-NNPSLITVFFSLKFK---LGHQSNSPFSFSFDRDYLIFQRLFWDFFDPSRSL*SSPLVMLQFWCFYSAIYI----DIIHLEPSEGVLGIIGLLDDH*SSLLIVLHVAALYRSVLYRRHGG 533 ND+CS G+++ + HWFC N QPCKCPL T +V SQ N+P + + ++ G +S F D +L+ +RL + DP RSL + F S IYI DII EGV+GI+GLLDD + + LH+AA+YRSVL RHGG Sbjct: 8 NDVCSVCHGGFNIPFQANCSHWFCGN-----CILLVWQHGSALQPCKCPLCRRQITLLVPAGASQRQCNDPEVSAIVGRVERYNRLFGRCDSSLFQRMRDLPFLL-RRLLRELMDPQRSLPLLIRARVYFAMLTSIIYIVSPVDII----PEGVVGILGLLDDFIIAFICFLHIAAIYRSVLVHRHGG 185
BLAST of GR420895 vs. TrEMBL
Match: Q93WJ5_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana GN=At1g72175 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.965e-12 Identity = 69/192 (35.94%), Postives = 96/192 (50.00%), Query Frame = 3 Query: 6 NDLCST--AGYSMSSLSWKFHWFCANNTPNXXXXXXXXXXXXXQPCKCPLPFSTNVVDLLHSQSN----NNPSLITVFFSLKFK---LGHQSNSPFSFSFDRDYLIFQRLFWDFFDPSRSL*SSPLVM---LQFWCFYSAIYI----DIIHLEPSEGVLGIIGLLDDH*SSLLIVLHVAALYRSVLYRRHGG 533 NDLCS + ++ + HWFC N QPCKCPL ++ L+ S+ N+ ++ V +L+ G +S+S D +L+ +RL + DP R+L PLV+ + SA+YI DII EGVLG++GLLDD +L+ LHVAALYRSVLY RH G Sbjct: 7 NDLCSICHSHFTAPCQANCSHWFCGN-----CIMLVWRHGSTLQPCKCPL-CRRHISLLVPSEDTIRDRNDATVKEVLGNLETYNRLFGGRSSSLVQRMQDLPFLL-RRLLREMMDPQRTL---PLVIRARVYIAMILSAVYIISPIDII----PEGVLGVVGLLDDLLIALICFLHVAALYRSVLYFRHAG 184
BLAST of GR420895 vs. TrEMBL
Match: B9MWE4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_678161 PE=4 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.277e-11 Identity = 59/168 (35.12%), Postives = 78/168 (46.43%), Query Frame = 3 Query: 60 HWFCANNTPNXXXXXXXXXXXXXQPCKCPL---PFSTNVVDLLHSQSNNNPSLITVFFSLK---FKLGHQSNSPFSFSFDRDYLIFQRLFWDFFDPSRSL*SSPLVMLQFWCFYSAIYI----DIIHLEPSEGVLGIIGLLDDH*SSLLIVLHVAALYRSVLYRRHGG 533 HWFC + QPCKCPL + V + N+P + V ++ G ++S D +L+ +RL + DP RSL + SA+YI DII EG+LGI+GLLDD L+ LHVAA+YRSVLY RHGG Sbjct: 27 HWFCGD-----CIMLVWHHGSVLQPCKCPLCRRQITLLVPGEASLRERNDPHVAEVLGKIERYNHLFGGNTSSLVQRMQDLPFLL-RRLLREIMDPQRSLPVVIKARVYIAMVLSAVYIISPVDII----PEGILGIVGLLDDLLIVLICFLHVAAIYRSVLYYRHGG 184 HSP 2 Score: 20.4014 bits (41), Expect = 2.277e-11 Identity = 5/8 (62.50%), Postives = 7/8 (87.50%), Query Frame = 1 Query: 37 CQVCHGNF 60 C +CHG+F Sbjct: 10 CAICHGHF 17
BLAST of GR420895 vs. TrEMBL
Match: D5A7W8_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.313e-10 Identity = 62/190 (32.63%), Postives = 90/190 (47.37%), Query Frame = 3 Query: 6 NDLCSTA--GYSMSSLSWKFHWFCANNTPNXXXXXXXXXXXXXQPCKCPL---PFSTNVVDLLHSQSNNNPSLITVFFSL-KFKLGHQSNSPFSFSFDRDY-LIFQRLFWDFFDPSRSL*SSPLVM-LQFWCFYS--AIYI----DIIHLEPSEGVLGIIGLLDDH*SSLLIVLHVAALYRSVLYRRHGG 533 ND CS + + + HWFC + QPCKCP+ P + + ++ + P + +V ++ K+ S F RD L+ +RL + DP R+L PLV + CF + AIY+ DI+ EG+LGI+GLLDD L++ HVA LYRS L+ RHGG Sbjct: 87 NDCCSICHDNFDLPCQANCAHWFCGD-----CILRVWHHSSALQPCKCPICRRPINLLIPCESATRRRDGPEVDSVLQNIEKYNRIFGGGSVGFFQRLRDTPLLLRRLLRELMDPQRAL---PLVFRARIVCFLALLAIYVFSPVDIL----PEGILGIVGLLDDLLVVLVVFFHVATLYRSALFSRHGG 264
BLAST of GR420895 vs. TrEMBL
Match: B9IQE5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_738775 PE=4 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.240e-10 Identity = 63/191 (32.98%), Postives = 90/191 (47.12%), Query Frame = 3 Query: 6 NDLCSTAG--YSMSSLSWKFHWFCANNTPNXXXXXXXXXXXXXQPCKCPL---PFSTNVVDLLHSQSNNNPSLITVFFSLK---FKLGHQSNSPFSFSFDRDYLIFQRLFWDFFDPSRSL*SSPLVM---LQFWCFYSAIY----IDIIHLEPSEGVLGIIGLLDDH*SSLLIVLHVAALYRSVLYRRHGG 533 ND CS ++++ + HWFC + QPCKCPL + V + ++P + V ++ G ++ D +L+ +RL + DP RSL PLV+ + SAIY IDII EG+LGI+GLLDD L+ LHVAA+YR+VL+ RHGG Sbjct: 7 NDFCSICHGHFNIACQANCSHWFCGD-----CIMLVWHHGSVLQPCKCPLCRRQITLLVPGEASLRERSDPDVAEVLGKIERYNHLFGGNTSGLIQRMQDLPFLL-RRLLREIMDPQRSL---PLVIRARVYIAVVLSAIYVISPIDII----PEGILGIVGLLDDLLVVLICFLHVAAIYRAVLHYRHGG 184
BLAST of GR420895 vs. TrEMBL
Match: Q9SK93_ARATH (F12K8.14 protein OS=Arabidopsis thaliana GN=F12K8.14 PE=4 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 1.897e-9 Identity = 50/104 (48.08%), Postives = 61/104 (58.65%), Query Frame = 3 Query: 243 GHQSNSPFSFSFDRDYLIFQRLFWDFFDPSRSL*SSPLVM---LQFWCFYSAIYI----DIIHLEPSEGVLGIIGLLDDH*SSLLIVLHVAALYRSVLYRRHGG 533 G QS+ D +L+ +RL + DP R+L PLV+ + SAIYI DII EGVLG+IGLLDD +L+ LHVAALYRSVLY RHGG Sbjct: 95 GGQSSGLIQRMQDLPFLL-RRLLREMMDPQRTL---PLVIRARVYIALILSAIYIISPIDII----PEGVLGVIGLLDDLLIALICFLHVAALYRSVLYSRHGG 190
BLAST of GR420895 vs. TAIR peptide
Match: AT1G22510.1 (| Symbols: | RING/U-box protein with domain of unknown function (DUF 1232) | chr1:7951003-7952597 REVERSE LENGTH=185) HSP 1 Score: 82.0333 bits (201), Expect = 3.759e-16 Identity = 72/191 (37.70%), Postives = 93/191 (48.69%), Query Frame = 3 Query: 6 NDLCSTAG--YSMSSLSWKFHWFCANNTPNXXXXXXXXXXXXXQPCKCPL---PFSTNVVDLLHSQSNNNPSLITVFFSLKFK---LGHQSNSPFSFSFDRDYLIFQRLFWDFFDPSRSL*SSPLVM---LQFWCFYSAIYI----DIIHLEPSEGVLGIIGLLDDH*SSLLIVLHVAALYRSVLYRRHGG 533 N+LCS ++ S HWFC N +PCKCPL P S V +S N+ ++ V ++ G QS+ D +L+ +RL + DP R+L PLV+ + SAIYI DII EGVLG+IGLLDD +L+ LHVAALYRSVLY RHGG Sbjct: 7 NELCSICHGHFNAPCQSNCSHWFCGN-----CIMLVWRHGSTLRPCKCPLCRRPISLLVPSEETVRSRNDATVSEVLHDVETYNRVFGGQSSGLIQRMQDLPFLL-RRLLREMMDPQRTL---PLVIRARVYIALILSAIYIISPIDII----PEGVLGVIGLLDDLLIALICFLHVAALYRSVLYSRHGG 184
BLAST of GR420895 vs. TAIR peptide
Match: AT1G22510.2 (| Symbols: | RING/U-box protein with domain of unknown function (DUF 1232) | chr1:7951003-7952593 REVERSE LENGTH=203) HSP 1 Score: 76.2554 bits (186), Expect = 2.063e-14 Identity = 62/148 (41.89%), Postives = 80/148 (54.05%), Query Frame = 3 Query: 129 QPCKCPL---PFSTNVVDLLHSQSNNNPSLITVFFSLKFK---LGHQSNSPFSFSFDRDYLIFQRLFWDFFDPSRSL*SSPLVM---LQFWCFYSAIYI----DIIHLEPSEGVLGIIGLLDDH*SSLLIVLHVAALYRSVLYRRHGG 533 +PCKCPL P S V +S N+ ++ V ++ G QS+ D +L+ +RL + DP R+L PLV+ + SAIYI DII EGVLG+IGLLDD +L+ LHVAALYRSVLY RHGG Sbjct: 63 RPCKCPLCRRPISLLVPSEETVRSRNDATVSEVLHDVETYNRVFGGQSSGLIQRMQDLPFLL-RRLLREMMDPQRTL---PLVIRARVYIALILSAIYIISPIDII----PEGVLGVIGLLDDLLIALICFLHVAALYRSVLYSRHGG 202
BLAST of GR420895 vs. TAIR peptide
Match: AT1G72175.1 (| Symbols: | RING/U-box protein with domain of unknown function (DUF 1232) | chr1:27157978-27159359 FORWARD LENGTH=185) HSP 1 Score: 75.0998 bits (183), Expect = 4.595e-14 Identity = 69/192 (35.94%), Postives = 96/192 (50.00%), Query Frame = 3 Query: 6 NDLCST--AGYSMSSLSWKFHWFCANNTPNXXXXXXXXXXXXXQPCKCPLPFSTNVVDLLHSQSN----NNPSLITVFFSLKFK---LGHQSNSPFSFSFDRDYLIFQRLFWDFFDPSRSL*SSPLVM---LQFWCFYSAIYI----DIIHLEPSEGVLGIIGLLDDH*SSLLIVLHVAALYRSVLYRRHGG 533 NDLCS + ++ + HWFC N QPCKCPL ++ L+ S+ N+ ++ V +L+ G +S+S D +L+ +RL + DP R+L PLV+ + SA+YI DII EGVLG++GLLDD +L+ LHVAALYRSVLY RH G Sbjct: 7 NDLCSICHSHFTAPCQANCSHWFCGN-----CIMLVWRHGSTLQPCKCPL-CRRHISLLVPSEDTIRDRNDATVKEVLGNLETYNRLFGGRSSSLVQRMQDLPFLL-RRLLREMMDPQRTL---PLVIRARVYIAMILSAVYIISPIDII----PEGVLGVVGLLDDLLIALICFLHVAALYRSVLYFRHAG 184 The following BLAST results are available for this feature:
BLAST of GR420895 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR420895 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 3
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR420895 ID=GR420895; Name=GR420895; organism=Cicer arietinum; type=EST; length=753bpback to top |