GR420990

EST Overview


Name	GR420990
Unique Name	GR420990
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	542

Libraries


Library Name	Type
LIBEST_024785 ICCV2 Salinity-stressed chickpea root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR420990 vs. SwissProt
Match: RL10_VITRI (60S ribosomal protein L10 OS=Vitis riparia GN=RPL10 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 5.181e-40
Identity = 90/115 (78.26%), Postives = 97/115 (84.35%), Query Frame = -1

Query:  180 AGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALCRAKFKF-RRQKITGSSSVGGFTKFSRTDYLKYKSCLQRTGYGVNAK-LGCHGPFLANRQPGRAFLNA 518
            AGADRLQTGMRGAFGKPQGTCARV+IGQVLLSVRCKD NSHHAQEAL RAKFKF  RQKI  S    GFTKF+RTDY+K+KS  +    GVNAK LGCHGP LANRQPG+AF+NA
Sbjct:  106 AGADRLQTGMRGAFGKPQGTCARVSIGQVLLSVRCKDGNSHHAQEALRRAKFKFPARQKIIVSRK-WGFTKFNRTDYIKWKSQNRILPDGVNAKLLGCHGP-LANRQPGKAFINA 218

[Close]

BLAST of GR420990 vs. SwissProt
Match: RL10_TOBAC (60S ribosomal protein L10 (Fragment) OS=Nicotiana tabacum GN=RPL10 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 7.482e-39
Identity = 92/117 (78.63%), Postives = 95/117 (81.20%), Query Frame = -1

Query:  174 AGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALCRAKFKF-RRQKITGSSSVGGFTKFSRTDYLKYKSCLQRTGYGVNAK-LGCHGPFLANRQPGRAFLNASG 518
            AGADRLQTGMRGAFGKPQG CARVAIGQVLLSVRCKD N++HAQEAL RAKFKF RRQKI  S    GFTKFSRTDYLKYKS  +    GVNAK LGCHG  LA RQPGRAFL A G
Sbjct:   35 AGADRLQTGMRGAFGKPQGVCARVAIGQVLLSVRCKDGNANHAQEALRRAKFKFPRRQKIIVSRK-WGFTKFSRTDYLKYKSENRIVPDGVNAKLLGCHGR-LAARQPGRAFLEAVG 149

[Close]

BLAST of GR420990 vs. SwissProt
Match: RL10_SOLME (60S ribosomal protein L10 OS=Solanum melongena GN=RPL10 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 8.272e-38
Identity = 91/116 (78.45%), Postives = 95/116 (81.90%), Query Frame = -1

Query:  177 AGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALCRAKFKF-RRQKITGSSSVGGFTKFSRTDYLKYKSCLQRTGYGVNAK-LGCHGPFLANRQPGRAFLNAS 518
            AGADRLQTGMRGAFGKPQG CARVAIGQVLLSVRCKD NS+HAQEAL RAKFKF  RQKI  S    GFTKFSRTDYLKYKS  +    GVNAK LG HGP LA RQPGRAFL++S
Sbjct:  106 AGADRLQTGMRGAFGKPQGVCARVAIGQVLLSVRCKDGNSNHAQEALRRAKFKFPGRQKIIVSRK-WGFTKFSRTDYLKYKSENRIVPDGVNAKLLGNHGP-LAARQPGRAFLSSS 219

[Close]

BLAST of GR420990 vs. SwissProt
Match: RL10_EUPES (60S ribosomal protein L10 OS=Euphorbia esula GN=RPL10 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.460e-34
Identity = 84/115 (73.04%), Postives = 92/115 (80.00%), Query Frame = -1

Query:  180 AGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALCRAKFKF-RRQKITGSSSVGGFTKFSRTDYLKYKSCLQRTGYGVNAK-LGCHGPFLANRQPGRAFLNA 518
            AGADRLQTGMRGAFGKPQG CARVAIGQVLLSVRCKD+NSH+AQEAL RAKFKF  RQKI  S    GFTK +R DY + KS  +    GVNAK LGCHG  LANR+PGRAF++A
Sbjct:  106 AGADRLQTGMRGAFGKPQGVCARVAIGQVLLSVRCKDNNSHNAQEALRRAKFKFPGRQKIIVSRK-WGFTKINRADYPRLKSENRILPDGVNAKLLGCHGR-LANRKPGRAFIDA 218

[Close]

BLAST of GR420990 vs. SwissProt
Match: RL102_ARATH (60S ribosomal protein L10-2 OS=Arabidopsis thaliana GN=RPL10B PE=2 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 3.253e-34
Identity = 83/115 (72.17%), Postives = 89/115 (77.39%), Query Frame = -1

Query:  180 AGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALCRAKFKF-RRQKITGSSSVGGFTKFSRTDYLKYKSCLQRTGYGVNAK-LGCHGPFLANRQPGRAFLNA 518
            AGADRLQTGMRGAFGK  GTCARVAIGQVLLSVRCKD++ HHAQEAL RAKFKF  RQKI  S    GFTKF+R DY K +   +    GVNAK L CHGP LANRQPG AFL+A
Sbjct:  106 AGADRLQTGMRGAFGKALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRK-WGFTKFNRADYTKLRQEKRIVPDGVNAKFLSCHGP-LANRQPGSAFLSA 218

[Close]

BLAST of GR420990 vs. SwissProt
Match: RL10_MAIZE (60S ribosomal protein L10 OS=Zea mays GN=RPL10 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.108e-33
Identity = 81/114 (71.05%), Postives = 87/114 (76.32%), Query Frame = -1

Query:  180 AGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALCRAKFKF-RRQKITGSSSVGGFTKFSRTDYLKYKSCLQRTGYGVNAKLGCHGPFLANRQPGRAFLNA 518
            AGADRLQTGMRGAFGKPQGTCARV IGQVLLSVRCKD+N+ HA EAL RAKFKF  RQKI   S   GFTKFSR DYLKYKS  +    GVNAKL  +   L  R PG+AFL+A
Sbjct:  106 AGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNAAHASEALRRAKFKFPARQKII-ESRKWGFTKFSRADYLKYKSEGRIVPDGVNAKLLANHGRLEKRAPGKAFLDA 218

[Close]

BLAST of GR420990 vs. SwissProt
Match: RL101_ARATH (60S ribosomal protein L10-1 OS=Arabidopsis thaliana GN=RPL10A PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.108e-33
Identity = 82/115 (71.30%), Postives = 88/115 (76.52%), Query Frame = -1

Query:  180 AGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALCRAKFKF-RRQKITGSSSVGGFTKFSRTDYLKYKSCLQRTGYGVNAK-LGCHGPFLANRQPGRAFLNA 518
            AGADRLQTGMRGAFGK  GTCARVAIGQVLLSVRCKD++ HHAQEAL RAKFKF  RQKI  S    GFTKF+R D+ K +   +    GVNAK L CHGP LANRQPG AFL A
Sbjct:  106 AGADRLQTGMRGAFGKALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRK-WGFTKFNRADFTKLRQEKRVVPDGVNAKFLSCHGP-LANRQPGSAFLPA 218

[Close]

BLAST of GR420990 vs. SwissProt
Match: RL10_PINTA (60S ribosomal protein L10 OS=Pinus taeda GN=RPL10 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.331e-32
Identity = 75/112 (66.96%), Postives = 90/112 (80.36%), Query Frame = -1

Query:  186 AGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALCRAKFKFRRQKITGSSSVGGFTKFSRTDYLKYKSCLQRTGYGVNAK-LGCHGPFLANRQPGRAFL 518
            AGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVR +D++S+HAQEAL RAKFKF  ++    +   GFTK++R DYLK+K+  +    GVN K LGC GP L+NR+PG+AFL
Sbjct:  106 AGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRSRDNHSNHAQEALRRAKFKFPGREKIIVNRKWGFTKYTRADYLKWKTENRIVPDGVNPKLLGCRGP-LSNRKPGQAFL 216

[Close]

BLAST of GR420990 vs. SwissProt
Match: RL102_ORYSJ (60S ribosomal protein L10-2 OS=Oryza sativa subsp. japonica GN=SG12 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.157e-31
Identity = 80/116 (68.97%), Postives = 90/116 (77.59%), Query Frame = -1

Query:  177 AGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALCRAKFKF-RRQKITGSSSVGGFTKFSRTDYLKYKSCLQRTGYGVNAK-LGCHGPFLANRQPGRAFLNAS 518
            AGADRLQTGMRGAFGKPQGTCARV IGQVLLSVRCK +N+ HA EAL RAKFKF  RQKI   S   GFTKFSR +Y++ KS  +    GVNAK LGCHG  L+ R PG+AFL+A+
Sbjct:  106 AGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKPNNAVHASEALRRAKFKFPGRQKII-ESRKWGFTKFSRDEYVRLKSEGRIMPDGVNAKLLGCHGR-LSARAPGKAFLSAA 219

[Close]

BLAST of GR420990 vs. SwissProt
Match: RL102_ORYSI (60S ribosomal protein L10-2 OS=Oryza sativa subsp. indica GN=SG12 PE=2 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 1.157e-31
Identity = 80/116 (68.97%), Postives = 90/116 (77.59%), Query Frame = -1

Query:  177 AGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALCRAKFKF-RRQKITGSSSVGGFTKFSRTDYLKYKSCLQRTGYGVNAK-LGCHGPFLANRQPGRAFLNAS 518
            AGADRLQTGMRGAFGKPQGTCARV IGQVLLSVRCK +N+ HA EAL RAKFKF  RQKI   S   GFTKFSR +Y++ KS  +    GVNAK LGCHG  L+ R PG+AFL+A+
Sbjct:  106 AGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKPNNAVHASEALRRAKFKFPGRQKII-ESRKWGFTKFSRDEYVRLKSEGRIMPDGVNAKLLGCHGR-LSARAPGKAFLSAA 219

[Close]

BLAST of GR420990 vs. TrEMBL
Match: C6SVF4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.388e-39
Identity = 93/116 (80.17%), Postives = 98/116 (84.48%), Query Frame = -1

Query:  177 AGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALCRAKFKF-RRQKITGSSSVGGFTKFSRTDYLKYKSCLQRTGYGVNAK-LGCHGPFLANRQPGRAFLNAS 518
            AGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL RAKFKF  RQKI  S    GFTKFSR DYLKYKS  +    GVNAK LGCHGP LANRQPG+AFL+++
Sbjct:  106 AGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRK-WGFTKFSRADYLKYKSESRIVPDGVNAKLLGCHGP-LANRQPGQAFLSSA 219

[Close]

BLAST of GR420990 vs. TrEMBL
Match: C6SVX5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 4.038e-39
Identity = 92/116 (79.31%), Postives = 98/116 (84.48%), Query Frame = -1

Query:  177 AGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALCRAKFKF-RRQKITGSSSVGGFTKFSRTDYLKYKSCLQRTGYGVNAK-LGCHGPFLANRQPGRAFLNAS 518
            AGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL RAKFKF  RQKI  S    GFTKFSR+DYLK+KS  +    GVNAK LGCHGP LANR+PGRAFL+ +
Sbjct:  106 AGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRK-WGFTKFSRSDYLKFKSENRIVPDGVNAKLLGCHGP-LANREPGRAFLDTA 219

[Close]

BLAST of GR420990 vs. TrEMBL
Match: A9PGG5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_663639 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 8.995e-39
Identity = 92/116 (79.31%), Postives = 97/116 (83.62%), Query Frame = -1

Query:  177 AGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALCRAKFKF-RRQKITGSSSVGGFTKFSRTDYLKYKSCLQRTGYGVNAK-LGCHGPFLANRQPGRAFLNAS 518
            AGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL RAKFKF  RQKI  S    GFTKF+R DYLK K+  +    GVNAK LGCHGP LANRQPGRAFL+A+
Sbjct:  106 AGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRK-WGFTKFNRNDYLKLKAENKIMSDGVNAKLLGCHGP-LANRQPGRAFLSAT 219

[Close]

BLAST of GR420990 vs. TrEMBL
Match: D7SJH2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00024537001 PE=4 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.175e-38
Identity = 90/115 (78.26%), Postives = 97/115 (84.35%), Query Frame = -1

Query:  180 AGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALCRAKFKF-RRQKITGSSSVGGFTKFSRTDYLKYKSCLQRTGYGVNAK-LGCHGPFLANRQPGRAFLNA 518
            AGADRLQTGMRGAFGKPQGTCARV+IGQVLLSVRCKD NSHHAQEAL RAKFKF  RQKI  S    GFTKF+RTDY+K+KS  +    GVNAK LGCHGP LANRQPG+AF+NA
Sbjct:  106 AGADRLQTGMRGAFGKPQGTCARVSIGQVLLSVRCKDGNSHHAQEALRRAKFKFPGRQKIIVSRK-WGFTKFNRTDYIKWKSENRILPDGVNAKLLGCHGP-LANRQPGKAFINA 218

[Close]

BLAST of GR420990 vs. TrEMBL
Match: B9SED8_RICCO (60S ribosomal protein L10, putative OS=Ricinus communis GN=RCOM_0962270 PE=4 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.534e-38
Identity = 92/116 (79.31%), Postives = 97/116 (83.62%), Query Frame = -1

Query:  177 AGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALCRAKFKF-RRQKITGSSSVGGFTKFSRTDYLKYKSCLQRTGYGVNAK-LGCHGPFLANRQPGRAFLNAS 518
            AGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKD+NSHHAQEAL RAKFKF  RQKI  S    GFTKF+R DY+K KS  +    GVNAK LGCHGP LANRQPGRAFL+AS
Sbjct:  106 AGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNSHHAQEALRRAKFKFPGRQKIIVSRK-WGFTKFNRNDYVKLKSENRIMPDGVNAKLLGCHGP-LANRQPGRAFLDAS 219

[Close]

BLAST of GR420990 vs. TrEMBL
Match: A9P8W6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_836143 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.004e-38
Identity = 92/113 (81.42%), Postives = 95/113 (84.07%), Query Frame = -1

Query:  186 AGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALCRAKFKF-RRQKITGSSSVGGFTKFSRTDYLKYKSCLQRTGYGVNAK-LGCHGPFLANRQPGRAFL 518
            AGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL RAKFKF  RQKI  S    GFTKF+RTDYLK K+  +    GVNAK LGCHGP LANRQPGRAFL
Sbjct:  106 AGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRK-WGFTKFNRTDYLKLKAENKVMPDGVNAKLLGCHGP-LANRQPGRAFL 216

[Close]

BLAST of GR420990 vs. TrEMBL
Match: B9T524_RICCO (60S ribosomal protein L10, putative OS=Ricinus communis GN=RCOM_1114190 PE=4 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 7.615e-38
Identity = 92/116 (79.31%), Postives = 96/116 (82.76%), Query Frame = -1

Query:  177 AGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALCRAKFKF-RRQKITGSSSVGGFTKFSRTDYLKYKSCLQRTGYGVNAK-LGCHGPFLANRQPGRAFLNAS 518
            AGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL RAKFKF  RQKI  S    GFTKF+R DY+K KS  +    GVNAK LGCHG  LANRQPGRAFL+AS
Sbjct:    5 AGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRK-WGFTKFNRNDYVKLKSENRIMPDGVNAKLLGCHGR-LANRQPGRAFLSAS 118

[Close]

BLAST of GR420990 vs. TrEMBL
Match: B3TLM0_ELAGV (QM-like protein OS=Elaeis guineensis var. tenera PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.696e-37
Identity = 91/116 (78.45%), Postives = 97/116 (83.62%), Query Frame = -1

Query:  177 AGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALCRAKFKF-RRQKITGSSSVGGFTKFSRTDYLKYKSCLQRTGYGVNAK-LGCHGPFLANRQPGRAFLNAS 518
            AGADRLQTGMRGAFGKPQGTCARV IGQVLLSVRCKDSNS+HAQEAL RAKFKF  RQKI  S    GFTKFSRTDYLK+KS  +    GVNAK LGCHGP LA RQPG+AFL+A+
Sbjct:  106 AGADRLQTGMRGAFGKPQGTCARVMIGQVLLSVRCKDSNSNHAQEALRRAKFKFPGRQKIIVSRK-WGFTKFSRTDYLKWKSENRIIPDGVNAKLLGCHGP-LAARQPGKAFLSAA 219

[Close]

BLAST of GR420990 vs. TrEMBL
Match: C6SWZ6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.216e-37
Identity = 89/112 (79.46%), Postives = 93/112 (83.04%), Query Frame = -1

Query:  189 AGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALCRAKFKF-RRQKITGSSSVGGFTKFSRTDYLKYKSCLQRTGYGVNAK-LGCHGPFLANRQPGRAF 518
            AGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL RAKFKF  RQKI  S    GFTKFSR+DYLK+KS  +    GVNAK LGCHGP LANR+PG  F
Sbjct:  106 AGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSKK-WGFTKFSRSDYLKFKSENRIVPDGVNAKLLGCHGP-LANREPGEPF 215

[Close]

BLAST of GR420990 vs. TrEMBL
Match: B7FGF8_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.779e-37
Identity = 90/116 (77.59%), Postives = 94/116 (81.03%), Query Frame = -1

Query:  177 AGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALCRAKFKF-RRQKITGSSSVGGFTKFSRTDYLKYKSCLQRTGYGVNAK-LGCHGPFLANRQPGRAFLNAS 518
            AGADRLQTGMRGAFG+PQG CARVAIGQVLLSVRCKD+NSHHAQEAL RAKFKF  RQKI  S    GFTK +R DYLK KS  +    GVNAK LGCHGP LANRQPGRAFL AS
Sbjct:  106 AGADRLQTGMRGAFGRPQGVCARVAIGQVLLSVRCKDNNSHHAQEALRRAKFKFPGRQKIIVSRK-WGFTKINRADYLKLKSENRIMPDGVNAKLLGCHGP-LANRQPGRAFLTAS 219

[Close]

BLAST of GR420990 vs. TAIR peptide
Match: AT1G26910.1 (| Symbols: RPL10B | Ribosomal protein L16p/L10e family protein | chr1:9321709-9322813 FORWARD LENGTH=221)

HSP 1 Score: 144.436 bits (363), Expect = 3.534e-35
Identity = 83/115 (72.17%), Postives = 89/115 (77.39%), Query Frame = -1

Query:  180 AGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALCRAKFKF-RRQKITGSSSVGGFTKFSRTDYLKYKSCLQRTGYGVNAK-LGCHGPFLANRQPGRAFLNA 518
            AGADRLQTGMRGAFGK  GTCARVAIGQVLLSVRCKD++ HHAQEAL RAKFKF  RQKI  S    GFTKF+R DY K +   +    GVNAK L CHGP LANRQPG AFL+A
Sbjct:  106 AGADRLQTGMRGAFGKALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRK-WGFTKFNRADYTKLRQEKRIVPDGVNAKFLSCHGP-LANRQPGSAFLSA 218

[Close]

BLAST of GR420990 vs. TAIR peptide
Match: AT1G14320.1 (| Symbols: SAC52, RPL10, RPL10A | Ribosomal protein L16p/L10e family protein | chr1:4888270-4889408 FORWARD LENGTH=220)

HSP 1 Score: 141.739 bits (356), Expect = 2.291e-34
Identity = 82/115 (71.30%), Postives = 88/115 (76.52%), Query Frame = -1

Query:  180 AGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALCRAKFKF-RRQKITGSSSVGGFTKFSRTDYLKYKSCLQRTGYGVNAK-LGCHGPFLANRQPGRAFLNA 518
            AGADRLQTGMRGAFGK  GTCARVAIGQVLLSVRCKD++ HHAQEAL RAKFKF  RQKI  S    GFTKF+R D+ K +   +    GVNAK L CHGP LANRQPG AFL A
Sbjct:  106 AGADRLQTGMRGAFGKALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRK-WGFTKFNRADFTKLRQEKRVVPDGVNAKFLSCHGP-LANRQPGSAFLPA 218

[Close]

BLAST of GR420990 vs. TAIR peptide
Match: AT1G66580.1 (| Symbols: SAG24, RPL10C | senescence associated gene 24 | chr1:24839208-24840439 FORWARD LENGTH=221)

HSP 1 Score: 135.191 bits (339), Expect = 2.144e-32
Identity = 79/116 (68.10%), Postives = 89/116 (76.72%), Query Frame = -1

Query:  177 AGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALCRAKFKF-RRQKITGSSSVGGFTKFSRTDYLKYKSCLQRTGYGVNAK-LGCHGPFLANRQPGRAFLNAS 518
            AGADRLQTGMRGAFGK  GTCARVAIGQVLLSVRCKD++  HAQEAL RAKFKF  RQKI  S    GFTKF+R +Y K ++  +    GVNAK L  HGP LANRQPG AF++A+
Sbjct:  106 AGADRLQTGMRGAFGKALGTCARVAIGQVLLSVRCKDNHGVHAQEALRRAKFKFPGRQKIIVSRK-WGFTKFNRAEYTKLRAMKRIVPDGVNAKFLSNHGP-LANRQPGSAFISAT 219

[Close]

BLAST of GR420990 vs. TAIR peptide
Match: AT1G14320.2 (| Symbols: SAC52, RPL10A | Ribosomal protein L16p/L10e family protein | chr1:4888270-4889408 FORWARD LENGTH=163)

HSP 1 Score: 92.4337 bits (228), Expect = 1.594e-19
Identity = 59/96 (61.46%), Postives = 67/96 (69.79%), Query Frame = -1

Query:  180 ARVAIGQ--VLLSVRCKDSNSHHAQEALCRAKFKF-RRQKITGSSSVGGFTKFSRTDYLKYKSCLQRTGYGVNAK-LGCHGPFLANRQPGRAFLNA 455
            AR+A  +  VLLSVRCKD++ HHAQEAL RAKFKF  RQKI  S    GFTKF+R D+ K +   +    GVNAK L CHGP LANRQPG AFL A
Sbjct:   68 ARIACNKYMVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRK-WGFTKFNRADFTKLRQEKRVVPDGVNAKFLSCHGP-LANRQPGSAFLPA 161

The following BLAST results are available for this feature:

BLAST of GR420990 vs. SwissProt
BLAST of GR420990 vs. TrEMBL
BLAST of GR420990 vs. TAIR peptide

BLAST of GR420990 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RL10_VITRI	5.181e-40	78.26	60S ribosomal protein L10 OS=Vitis riparia GN=RPL1...	[more]
RL10_TOBAC	7.482e-39	78.63	60S ribosomal protein L10 (Fragment) OS=Nicotiana ...	[more]
RL10_SOLME	8.272e-38	78.45	60S ribosomal protein L10 OS=Solanum melongena GN=...	[more]
RL10_EUPES	1.460e-34	73.04	60S ribosomal protein L10 OS=Euphorbia esula GN=RP...	[more]
RL102_ARATH	3.253e-34	72.17	60S ribosomal protein L10-2 OS=Arabidopsis thalian...	[more]
RL10_MAIZE	2.108e-33	71.05	60S ribosomal protein L10 OS=Zea mays GN=RPL10 PE=...	[more]
RL101_ARATH	2.108e-33	71.30	60S ribosomal protein L10-1 OS=Arabidopsis thalian...	[more]
RL10_PINTA	2.331e-32	66.96	60S ribosomal protein L10 OS=Pinus taeda GN=RPL10 ...	[more]
RL102_ORYSJ	1.157e-31	68.97	60S ribosomal protein L10-2 OS=Oryza sativa subsp....	[more]
RL102_ORYSI	1.157e-31	68.97	60S ribosomal protein L10-2 OS=Oryza sativa subsp....	[more]

BLAST of GR420990 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6SVF4_SOYBN	1.388e-39	80.17	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6SVX5_SOYBN	4.038e-39	79.31	Putative uncharacterized protein OS=Glycine max PE...	[more]
A9PGG5_POPTR	8.995e-39	79.31	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7SJH2_VITVI	1.175e-38	78.26	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9SED8_RICCO	1.534e-38	79.31	60S ribosomal protein L10, putative OS=Ricinus com...	[more]
A9P8W6_POPTR	2.004e-38	81.42	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9T524_RICCO	7.615e-38	79.31	60S ribosomal protein L10, putative OS=Ricinus com...	[more]
B3TLM0_ELAGV	1.696e-37	78.45	QM-like protein OS=Elaeis guineensis var. tenera P...	[more]
C6SWZ6_SOYBN	2.216e-37	79.46	Putative uncharacterized protein OS=Glycine max PE...	[more]
B7FGF8_MEDTR	3.779e-37	77.59	Putative uncharacterized protein OS=Medicago trunc...	[more]

BLAST of GR420990 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 4


Match Name	E-value	Identity	Description
AT1G26910.1	3.534e-35	72.17	\| Symbols: RPL10B \| Ribosomal protein L16p/L10e fa...	[more]
AT1G14320.1	2.291e-34	71.30	\| Symbols: SAC52, RPL10, RPL10A \| Ribosomal protei...	[more]
AT1G66580.1	2.144e-32	68.10	\| Symbols: SAG24, RPL10C \| senescence associated g...	[more]
AT1G14320.2	1.594e-19	61.46	\| Symbols: SAC52, RPL10A \| Ribosomal protein L16p/...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001197	Ribosomal protein L10e	PANTHER	PTHR11726	60S RIBOSOMAL PROTEIN L10	coord: 9..122 score: 1.9
IPR016180	Ribosomal protein L10e/L16	PFAM	PF00252	Ribosomal_L16	coord: 7..62 score: 3.4
IPR016180	Ribosomal protein L10e/L16	SUPERFAMILY	54686	Ribosomal protein L16p/L10e	coord: 9..76 score: 1.5
IPR018255	Ribosomal protein L10e, conserved site	PROSITE	PS01257	RIBOSOMAL_L10E	coord: 11..32 score
None	No IPR available	GENE3D	3.90.1170.10	no description	coord: 8..71 score: 1.8

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR420990 ID=GR420990; Name=GR420990; organism=Cicer arietinum; type=EST; length=542bp
AACATTAATTTCGTCAAAATATTATTCAGGGGGCCATGTTTGCAAAAAGA
AAATTAACCCAGCTCAGTATTATTATAATATAATGTGCAAACAACATAAA
ATTCAAATTCACTCTTTCAAAACAAATCCGACCCAAACTCTAATATTCCT
TTATAAAGATTAAACAAGCCTAAGCCACTGGCATTCAAAAAAGCTCTTCC
TGGTTGACGGTTAGCCAAAAATGGTCCATGGCACCCAAGCTTTGCATTCA
CACCATATCCTGTTCTCTGCAGGCATGACTTGTACTTCAAATAGTCAGTA
CGGCTAAACTTGGTGAATCCCCCTACTGACGAACTTCCGGTGATCTTTTG
ACGCCGAAACTTAAACTTGGCACGACAAAGGGCCTCCTGTGCATGATGGC
TATTGCTGTCCTTGCAGCGGACTGAAAGAAGGACCTGCCCAATAGCAACT
CTAGCACAAGTTCCCTGTGGCTTTCCAAAAGCACCTCTCATACCTGTCTG
AAGCCTATCAGCTCCAGCTTGCACATGAATTAATCCTAGCAT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR001197	Ribosomal_uL16_euk_arch
IPR016180	Ribosomal_uL16_dom
IPR018255	Ribosomal_L10e_CS

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