GR421049

EST Overview


Name	GR421049
Unique Name	GR421049
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	334

Libraries


Library Name	Type
LIBEST_024785 ICCV2 Salinity-stressed chickpea root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR421049 vs. SwissProt
Match: RL36A_ARATH (60S ribosomal protein L36a OS=Arabidopsis thaliana GN=RPL36AA PE=2 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 4.309e-14
Identity = 45/87 (51.72%), Postives = 50/87 (57.47%), Query Frame = -3

Query:    3 ECKEAPSNKVTDNTKGKDSIAAQGKGRYRRLQQSDGGQTKPVFHXXXXXXXXXXXXAEG*NACFPTKQRG-AAIKHFEIGGDKKGKG 260
            ECK+   +KVT   KGKDS+AAQGK RY R Q   GGQTKPVFH             +   +C    QR     KHFEIGGDKKGKG
Sbjct:   16 ECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQC-QSCKHFSQRPIKRCKHFEIGGDKKGKG 101

[Close]

BLAST of GR421049 vs. SwissProt
Match: RL44_GOSHI (60S ribosomal protein L44 OS=Gossypium hirsutum GN=RPL44 PE=3 SV=3)

HSP 1 Score: 75.0998 bits (183), Expect = 1.254e-13
Identity = 41/86 (47.67%), Postives = 48/86 (55.81%), Query Frame = -3

Query:    3 ECKEAPSNKVTDNTKGKDSIAAQGKGRYRRLQQSDGGQTKPVFHXXXXXXXXXXXXAEG*NACFPTKQRGAAIKHFEIGGDKKGKG 260
            EC++   +KVT   KGKDS+AAQGK RY R Q   GGQTKPVFH             +       ++      KHFEIGGDKKGKG
Sbjct:   16 ECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 101

[Close]

BLAST of GR421049 vs. SwissProt
Match: RL44_PHARH (60S ribosomal protein L44 OS=Phaffia rhodozyma GN=RPL44 PE=3 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 2.365e-12
Identity = 40/85 (47.06%), Postives = 45/85 (52.94%), Query Frame = -3

Query:    3 CKEAPSNKVTDNTKGKDSIAAQGKGRYRRLQQSDGGQTKPVFHXXXXXXXXXXXXAEG*NACFPTKQRGAAIKHFEIGGDKKGKG 257
            CK+   +KVT   KGKDSI AQGK RY R Q   GGQTKPVFH             E     +  +      KHFE+GGDKK KG
Sbjct:   17 CKKHTPHKVTQYKKGKDSIFAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECSVCKYKMQMTLKRCKHFELGGDKKTKG 101

[Close]

BLAST of GR421049 vs. SwissProt
Match: RL44_COPCI (60S ribosomal protein L44 OS=Coprinopsis cinerea GN=RPL44 PE=3 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 1.174e-11
Identity = 39/85 (45.88%), Postives = 45/85 (52.94%), Query Frame = -3

Query:    3 CKEAPSNKVTDNTKGKDSIAAQGKGRYRRLQQSDGGQTKPVFHXXXXXXXXXXXXAEG*NACFPTKQRGAAIKHFEIGGDKKGKG 257
            CK+   +KVT   KGKDSI AQGK RY R Q   GGQTKPVFH             E     +  +      KHFE+GG+KK KG
Sbjct:   17 CKKHTPHKVTQYKKGKDSIFAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECTVCKYKMQVSLKRCKHFELGGEKKTKG 101

[Close]

BLAST of GR421049 vs. SwissProt
Match: RL44_COPC7 (60S ribosomal protein L44 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=RPL44 PE=3 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 1.174e-11
Identity = 39/85 (45.88%), Postives = 45/85 (52.94%), Query Frame = -3

Query:    3 CKEAPSNKVTDNTKGKDSIAAQGKGRYRRLQQSDGGQTKPVFHXXXXXXXXXXXXAEG*NACFPTKQRGAAIKHFEIGGDKKGKG 257
            CK+   +KVT   KGKDSI AQGK RY R Q   GGQTKPVFH             E     +  +      KHFE+GG+KK KG
Sbjct:   17 CKKHTPHKVTQYKKGKDSIFAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECTVCKYKMQVSLKRCKHFELGGEKKTKG 101

[Close]

BLAST of GR421049 vs. SwissProt
Match: RL44_CRYNE (60S ribosomal protein L44 OS=Cryptococcus neoformans GN=RPL44 PE=3 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 2.614e-11
Identity = 41/87 (47.13%), Postives = 49/87 (56.32%), Query Frame = -3

Query:    3 CKEAPSNKVTDNTKGKDSIAAQGKGRYRRLQQSDGGQTKPVFHXXXXXXXXXXXXAEG*NACFPTKQRGA--AIKHFEIGGDKKGKG 257
            C++   +KVT   KGKDS++AQGK RY R Q   GGQTKPVFH             E    C  TK + A    KHFE+GGDKK +G
Sbjct:   17 CRKHTPHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLEC-TVC-KTKHQLALKRCKHFELGGDKKQRG 101

[Close]

BLAST of GR421049 vs. SwissProt
Match: RL44P_CANMA (60S ribosomal protein L44 P OS=Candida maltosa GN=L41P1A PE=3 SV=3)

HSP 1 Score: 65.4698 bits (158), Expect = 9.935e-11
Identity = 39/90 (43.33%), Postives = 45/90 (50.00%), Query Frame = -3

Query:    3 ECKEAPSNKVTDNTKGKDSIAAQGKGRYRRLQQSDGGQTKPVFHXXXXXXXXXXXXAEG*NACFPTKQRG----AAIKHFEIGGDKKGKG 260
            EC++   +KVT    GK S+ AQGK RY R Q   GGQTKPVFH             E    C   K +        KHFE+GGDKK KG
Sbjct:   16 ECRKHSQHKVTQYKAGKSSLFAQGKRRYDRKQSGFGGQTKPVFHKKAKTTKKVVLRLE----CVVCKTKAQLALKRCKHFELGGDKKQKG 101

[Close]

BLAST of GR421049 vs. SwissProt
Match: RL44_DEBHA (60S ribosomal protein L44 OS=Debaryomyces hansenii GN=RPL44 PE=3 SV=3)

HSP 1 Score: 65.0846 bits (157), Expect = 1.298e-10
Identity = 39/90 (43.33%), Postives = 46/90 (51.11%), Query Frame = -3

Query:    3 ECKEAPSNKVTDNTKGKDSIAAQGKGRYRRLQQSDGGQTKPVFHXXXXXXXXXXXXAEG*NACFPTKQRG----AAIKHFEIGGDKKGKG 260
            EC++   +KVT    GK S+ AQGK RY R Q+  GGQTKPVFH             E    C   K +        KHFE+GGDKK KG
Sbjct:   16 ECRKHTQHKVTQYKAGKASLFAQGKRRYDRKQKGYGGQTKPVFHKKAKTTKKVVLRLE----CVVCKTKAQLSLKRCKHFELGGDKKQKG 101

[Close]

BLAST of GR421049 vs. SwissProt
Match: RL36A_TAKRU (60S ribosomal protein L36a OS=Takifugu rubripes GN=rpl36a PE=3 SV=2)

HSP 1 Score: 65.0846 bits (157), Expect = 1.298e-10
Identity = 39/88 (44.32%), Postives = 47/88 (53.41%), Query Frame = -3

Query:    3 ECKEAPSNKVTDNTKGKDSIAAQGKGRYRRLQQSDGGQTKPVFHXXXXXXXXXXXXAEG*NACFPTKQRGA--AIKHFEIGGDKKGKG 260
            +CK+   +KVT   KGKDS+ AQGK RY R Q   GGQTKP+F              E       +K+  A    KHFE+GGDKK KG
Sbjct:   14 KCKKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKG 101

[Close]

BLAST of GR421049 vs. SwissProt
Match: RL36A_ICTPU (60S ribosomal protein L36a OS=Ictalurus punctatus GN=rpl36a PE=3 SV=2)

HSP 1 Score: 65.0846 bits (157), Expect = 1.298e-10
Identity = 39/88 (44.32%), Postives = 47/88 (53.41%), Query Frame = -3

Query:    3 ECKEAPSNKVTDNTKGKDSIAAQGKGRYRRLQQSDGGQTKPVFHXXXXXXXXXXXXAEG*NACFPTKQRGA--AIKHFEIGGDKKGKG 260
            +CK+   +KVT   KGKDS+ AQGK RY R Q   GGQTKP+F              E       +K+  A    KHFE+GGDKK KG
Sbjct:   14 KCKKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKG 101

[Close]

BLAST of GR421049 vs. TrEMBL
Match: A9P9G6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_749327 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.203e-13
Identity = 45/87 (51.72%), Postives = 49/87 (56.32%), Query Frame = -3

Query:    3 ECKEAPSNKVTDNTKGKDSIAAQGKGRYRRLQQSDGGQTKPVFHXXXXXXXXXXXXAEG*NACFPTKQRG-AAIKHFEIGGDKKGKG 260
            ECK+   +KVT   KGKDS+AAQGK RY R Q   GGQTKPVFH             +   AC    Q      KHFEIGGDKKGKG
Sbjct:   16 ECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQC-QACKHVSQHAIKRCKHFEIGGDKKGKG 101

[Close]

BLAST of GR421049 vs. TrEMBL
Match: Q2V9C3_SOLTU (Ribosomal protein L41-like OS=Solanum tuberosum PE=4 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 8.874e-13
Identity = 42/86 (48.84%), Postives = 50/86 (58.14%), Query Frame = -3

Query:    3 ECKEAPSNKVTDNTKGKDSIAAQGKGRYRRLQQSDGGQTKPVFHXXXXXXXXXXXXAEG*NACFPTKQRGAAIKHFEIGGDKKGKG 260
            ECK+   +KVT   KGKDS+AAQGK RY R Q   GGQTKPVFH             +  +A   ++      KHFEIGGDKKG+G
Sbjct:   16 ECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKANTTKKIVLRLQCQDAHHVSQHPIKRCKHFEIGGDKKGQG 101

[Close]

BLAST of GR421049 vs. TrEMBL
Match: D7L3B4_ARALY (60S ribosomal protein L36a/L44 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_479854 PE=4 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 8.874e-13
Identity = 45/87 (51.72%), Postives = 50/87 (57.47%), Query Frame = -3

Query:    3 ECKEAPSNKVTDNTKGKDSIAAQGKGRYRRLQQSDGGQTKPVFHXXXXXXXXXXXXAEG*NACFPTKQRG-AAIKHFEIGGDKKGKG 260
            ECK+   +KVT   KGKDS+AAQGK RY R Q   GGQTKPVFH             +   +C    QR     KHFEIGGDKKGKG
Sbjct:   16 ECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQC-QSCKHFSQRPIKRCKHFEIGGDKKGKG 101

[Close]

BLAST of GR421049 vs. TrEMBL
Match: B9SLN5_RICCO (60S ribosomal protein L44, putative OS=Ricinus communis GN=RCOM_0513900 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 8.874e-13
Identity = 44/87 (50.57%), Postives = 49/87 (56.32%), Query Frame = -3

Query:    3 ECKEAPSNKVTDNTKGKDSIAAQGKGRYRRLQQSDGGQTKPVFHXXXXXXXXXXXXAEG*NACFPTKQRG-AAIKHFEIGGDKKGKG 260
            EC++   +KVT   KGKDS+AAQGK RY R Q   GGQTKPVFH             +G   C    Q      KHFEIGGDKKGKG
Sbjct:   28 ECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKTTKKIVLRLQCQG---CKHVSQHPIKRCKHFEIGGDKKGKG 111

[Close]

BLAST of GR421049 vs. TrEMBL
Match: A9PD13_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_819897 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 8.874e-13
Identity = 42/86 (48.84%), Postives = 49/86 (56.98%), Query Frame = -3

Query:    3 ECKEAPSNKVTDNTKGKDSIAAQGKGRYRRLQQSDGGQTKPVFHXXXXXXXXXXXXAEG*NACFPTKQRGAAIKHFEIGGDKKGKG 260
            ECK+   +KVT   KGKDS+AAQGK RY R Q   GGQTKPVFH             +  +    ++      KHFEIGGDKKGKG
Sbjct:   16 ECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQSCKHVSQHPIKRCKHFEIGGDKKGKG 101

[Close]

BLAST of GR421049 vs. TrEMBL
Match: C6SVA6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.159e-12
Identity = 42/86 (48.84%), Postives = 48/86 (55.81%), Query Frame = -3

Query:    3 ECKEAPSNKVTDNTKGKDSIAAQGKGRYRRLQQSDGGQTKPVFHXXXXXXXXXXXXAEG*NACFPTKQRGAAIKHFEIGGDKKGKG 260
            EC++   +KVT   KGKDSIAAQGK RY R Q   GGQTKPVFH             +       ++      KHFEIGGDKKGKG
Sbjct:   16 ECRKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKG 101

[Close]

BLAST of GR421049 vs. TrEMBL
Match: Q00508_CANMA (Ribosomal protein L41 OS=Candida maltosa PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.159e-12
Identity = 42/86 (48.84%), Postives = 48/86 (55.81%), Query Frame = -3

Query:    3 ECKEAPSNKVTDNTKGKDSIAAQGKGRYRRLQQSDGGQTKPVFHXXXXXXXXXXXXAEG*NACFPTKQRGAAIKHFEIGGDKKGKG 260
            ECK+   +KVT   KGKDS+AAQGK RY R Q   GGQTKPVFH             +       ++      KHFEIGGDKKGKG
Sbjct:   16 ECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 101

[Close]

BLAST of GR421049 vs. TrEMBL
Match: Q94ER6_BRARP (60S ribosomal protein L144 (Fragment) OS=Brassica rapa subsp. pekinensis PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.514e-12
Identity = 42/86 (48.84%), Postives = 48/86 (55.81%), Query Frame = -3

Query:    3 ECKEAPSNKVTDNTKGKDSIAAQGKGRYRRLQQSDGGQTKPVFHXXXXXXXXXXXXAEG*NACFPTKQRGAAIKHFEIGGDKKGKG 260
            ECK+   +KVT   KGKDS+AAQGK RY R Q   GGQTKPVFH             +       ++      KHFEIGGDKKGKG
Sbjct:   30 ECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQTCKHFSQHSIKRCKHFEIGGDKKGKG 115

[Close]

BLAST of GR421049 vs. TrEMBL
Match: B7FGY8_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.514e-12
Identity = 42/86 (48.84%), Postives = 48/86 (55.81%), Query Frame = -3

Query:    3 ECKEAPSNKVTDNTKGKDSIAAQGKGRYRRLQQSDGGQTKPVFHXXXXXXXXXXXXAEG*NACFPTKQRGAAIKHFEIGGDKKGKG 260
            ECK+   ++VT   KGKDSIAAQGK RY R Q   GGQTKPVFH             +       ++      KHFEIGGDKKGKG
Sbjct:   16 ECKKHTLHEVTQYKKGKDSIAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKG 101

[Close]

BLAST of GR421049 vs. TrEMBL
Match: C5XAH7_SORBI (Putative uncharacterized protein Sb02g022390 OS=Sorghum bicolor GN=Sb02g022390 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.977e-12
Identity = 41/86 (47.67%), Postives = 49/86 (56.98%), Query Frame = -3

Query:    3 ECKEAPSNKVTDNTKGKDSIAAQGKGRYRRLQQSDGGQTKPVFHXXXXXXXXXXXXAEG*NACFPTKQRGAAIKHFEIGGDKKGKG 260
            ECK+   +KVT   KGKDS++AQGK RY R Q   GGQTKPVFH             +  +    ++      KHFEIGGDKKGKG
Sbjct:   16 ECKKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLKLQCQSCKHYSQHAIKRCKHFEIGGDKKGKG 101

[Close]

BLAST of GR421049 vs. TAIR peptide
Match: AT4G14320.1 (| Symbols: | Zinc-binding ribosomal protein family protein | chr4:8242684-8243805 REVERSE LENGTH=105)

HSP 1 Score: 76.6406 bits (187), Expect = 3.418e-15
Identity = 45/87 (51.72%), Postives = 50/87 (57.47%), Query Frame = -3

Query:    3 ECKEAPSNKVTDNTKGKDSIAAQGKGRYRRLQQSDGGQTKPVFHXXXXXXXXXXXXAEG*NACFPTKQRG-AAIKHFEIGGDKKGKG 260
            ECK+   +KVT   KGKDS+AAQGK RY R Q   GGQTKPVFH             +   +C    QR     KHFEIGGDKKGKG
Sbjct:   16 ECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQC-QSCKHFSQRPIKRCKHFEIGGDKKGKG 101

[Close]

BLAST of GR421049 vs. TAIR peptide
Match: AT3G23390.1 (| Symbols: | Zinc-binding ribosomal protein family protein | chr3:8375427-8376224 FORWARD LENGTH=105)

HSP 1 Score: 76.6406 bits (187), Expect = 3.418e-15
Identity = 45/87 (51.72%), Postives = 50/87 (57.47%), Query Frame = -3

Query:    3 ECKEAPSNKVTDNTKGKDSIAAQGKGRYRRLQQSDGGQTKPVFHXXXXXXXXXXXXAEG*NACFPTKQRG-AAIKHFEIGGDKKGKG 260
            ECK+   +KVT   KGKDS+AAQGK RY R Q   GGQTKPVFH             +   +C    QR     KHFEIGGDKKGKG
Sbjct:   16 ECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQC-QSCKHFSQRPIKRCKHFEIGGDKKGKG 101

[Close]

BLAST of GR421049 vs. TAIR peptide
Match: AT4G14320.2 (| Symbols: | Zinc-binding ribosomal protein family protein | chr4:8241841-8243805 REVERSE LENGTH=154)

HSP 1 Score: 60.077 bits (144), Expect = 3.310e-10
Identity = 29/44 (65.91%), Postives = 32/44 (72.73%), Query Frame = -3

Query:  129 ECKEAPSNKVTDNTKGKDSIAAQGKGRYRRLQQSDGGQTKPVFH 260
            ECK+   +KVT   KGKDS+AAQGK RY R Q   GGQTKPVFH
Sbjct:   16 ECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH 59

The following BLAST results are available for this feature:

BLAST of GR421049 vs. SwissProt
BLAST of GR421049 vs. TrEMBL
BLAST of GR421049 vs. TAIR peptide

BLAST of GR421049 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RL36A_ARATH	4.309e-14	51.72	60S ribosomal protein L36a OS=Arabidopsis thaliana...	[more]
RL44_GOSHI	1.254e-13	47.67	60S ribosomal protein L44 OS=Gossypium hirsutum GN...	[more]
RL44_PHARH	2.365e-12	47.06	60S ribosomal protein L44 OS=Phaffia rhodozyma GN=...	[more]
RL44_COPCI	1.174e-11	45.88	60S ribosomal protein L44 OS=Coprinopsis cinerea G...	[more]
RL44_COPC7	1.174e-11	45.88	60S ribosomal protein L44 OS=Coprinopsis cinerea (...	[more]
RL44_CRYNE	2.614e-11	47.13	60S ribosomal protein L44 OS=Cryptococcus neoforma...	[more]
RL44P_CANMA	9.935e-11	43.33	60S ribosomal protein L44 P OS=Candida maltosa GN=...	[more]
RL44_DEBHA	1.298e-10	43.33	60S ribosomal protein L44 OS=Debaryomyces hansenii...	[more]
RL36A_TAKRU	1.298e-10	44.32	60S ribosomal protein L36a OS=Takifugu rubripes GN...	[more]
RL36A_ICTPU	1.298e-10	44.32	60S ribosomal protein L36a OS=Ictalurus punctatus ...	[more]

BLAST of GR421049 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
A9P9G6_POPTR	5.203e-13	51.72	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q2V9C3_SOLTU	8.874e-13	48.84	Ribosomal protein L41-like OS=Solanum tuberosum PE...	[more]
D7L3B4_ARALY	8.874e-13	51.72	60S ribosomal protein L36a/L44 OS=Arabidopsis lyra...	[more]
B9SLN5_RICCO	8.874e-13	50.57	60S ribosomal protein L44, putative OS=Ricinus com...	[more]
A9PD13_POPTR	8.874e-13	48.84	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
C6SVA6_SOYBN	1.159e-12	48.84	Putative uncharacterized protein OS=Glycine max PE...	[more]
Q00508_CANMA	1.159e-12	48.84	Ribosomal protein L41 OS=Candida maltosa PE=3 SV=1	[more]
Q94ER6_BRARP	1.514e-12	48.84	60S ribosomal protein L144 (Fragment) OS=Brassica ...	[more]
B7FGY8_MEDTR	1.514e-12	48.84	Putative uncharacterized protein OS=Medicago trunc...	[more]
C5XAH7_SORBI	1.977e-12	47.67	Putative uncharacterized protein Sb02g022390 OS=So...	[more]

BLAST of GR421049 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT4G14320.1	3.418e-15	51.72	\| Symbols: \| Zinc-binding ribosomal protein famil...	[more]
AT3G23390.1	3.418e-15	51.72	\| Symbols: \| Zinc-binding ribosomal protein famil...	[more]
AT4G14320.2	3.310e-10	65.91	\| Symbols: \| Zinc-binding ribosomal protein famil...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000552	Ribosomal protein L44e	GENE3D	3.10.450.80	no description	coord: 7..56 score: 8.1
IPR000552	Ribosomal protein L44e	PANTHER	PTHR10369	60S RIBOSOMAL PROTEIN L44	coord: 8..55 score: 9.9
IPR000552	Ribosomal protein L44e	PFAM	PF00935	Ribosomal_L44	coord: 15..56 score: 5
IPR011332	Ribosomal protein, zinc-binding domain	SUPERFAMILY	57829	Zn-binding ribosomal proteins	coord: 7..61 score: 1.6
None	No IPR available	SEG	seg	seg	coord: 52..64 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR421049 ID=GR421049; Name=GR421049; organism=Cicer arietinum; type=EST; length=334bp
GTTCCCTTGCCCTTCTTGTCACCACCAATCTCAAAGTGCTTGATAGCAGC
ACCTCTTTGCTTGGTTGGGAAACAGGCATTTCAACCTTCAGCAGCGCTAC
TTATTATGGACAATTTTTTAGCCTTCTTGTGGAAAACGGGCTTAGTCTGA
CCACCATCGGACTGTTGTAACCTGCGATAACGACCCTTACCTTGAGCGGC
GATGCTATCCTTACCCTTTGTATTGTCAGTCACTTTGTTGCTTGGAGCTT
CCTTGCATTCTGGGAACTGTCTCTTCGGCATTCATTTCTTTGCGTGGGCC
ATTGGAGGCACGCATCGGTTCGATAAGGGACCTT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR000552	Ribosomal_eL44
IPR011332	Ribosomal_zn-bd

Search form