GR912923

EST Overview


Name	GR912923
Unique Name	GR912923
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	372

Libraries


Library Name	Type
LIBEST_024969 Early immune responsive suppression subtracted cDNA libraries of Chickpea (Cicer arietinum cv. WR-315) wilt	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
KEGG analysis for Cicer arietinum unigene v1	2011-01-05
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR912923 vs. SwissProt
Match: SNL3_ARATH (Paired amphipathic helix protein Sin3-like 3 OS=Arabidopsis thaliana GN=SNL3 PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 6.754e-28
Identity = 66/107 (61.68%), Postives = 78/107 (72.90%), Query Frame = -2

Query:   48 EEDGDHEHGNKAESEGEAEGMTDANDVEGDGSSLPYSECFLLTVKPLVKHVGPV--LHGKEK----NVQIFYGNDSFYVLFRLHQTLYERIRSAKITSSSAEKKWRT 350
            + + D ++ NK ESEGEAE M DA+D E +GS+LP S  FLL VKPLVK+V     LH K+K    N Q+FYGNDSFYVLFRLH+ LYERI SAK+ SSS E KWRT
Sbjct: 1006 DPEDDLDNNNKGESEGEAECMADAHDAEENGSALPVSARFLLHVKPLVKYVPSAIALHDKDKDSLKNSQVFYGNDSFYVLFRLHRILYERILSAKVNSSSPEGKWRT 1112

[Close]

BLAST of GR912923 vs. SwissProt
Match: SNL4_ARATH (Paired amphipathic helix protein Sin3-like 4 OS=Arabidopsis thaliana GN=SNL4 PE=3 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 1.557e-24
Identity = 65/108 (60.19%), Postives = 76/108 (70.37%), Query Frame = -2

Query:   48 EEDGDHEHGNKAESEGEAE-GMTDAND-VEGDGSSLPYSECFLLTVKPLVKHVGPVLHGKE-----KNVQIFYGNDSFYVLFRLHQTLYERIRSAKITSSSAEKKWRT 350
            E+D DH   NK ESEGEAE GM+D +D  EGD   L  S   LL VKPL K+V P L+ K+     KN Q+FYGNDSFYVLFRLHQ LY+RI SAKI SSS ++KW+T
Sbjct: 1007 EDDIDH---NKVESEGEAEEGMSDGHDDTEGDMPVLSISVKNLLHVKPLAKYVPPALYDKDNDDSRKNSQVFYGNDSFYVLFRLHQILYDRILSAKINSSSPDRKWKT 1111

[Close]

BLAST of GR912923 vs. SwissProt
Match: SNL1_ARATH (Paired amphipathic helix protein Sin3-like 1 OS=Arabidopsis thaliana GN=SNL1 PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 9.446e-22
Identity = 58/100 (58.00%), Postives = 70/100 (70.00%), Query Frame = -2

Query:   57 EEDGDHEH-GNKAESEGEAEGMTDANDVEGDGSSLPYSECFLLTVKPLVKHVGPVL-HGKEKNVQIFYGNDSFYVLFRLHQTLYERIRSAKITSSSAEKK 350
            EE+G+H+    KAESEGEAEGM D + +EG+   LP SE  LL+V+PL KHV  VL   + K++Q+FYGND FYVLFRLHQ LYERI  AK   S  E K
Sbjct: 1035 EENGEHDEIDGKAESEGEAEGM-DPHLLEGESELLPQSERVLLSVRPLSKHVAAVLCDERTKDLQVFYGNDDFYVLFRLHQILYERILYAKRNCSGGELK 1133

[Close]

BLAST of GR912923 vs. SwissProt
Match: SNL5_ARATH (Paired amphipathic helix protein Sin3-like 5 OS=Arabidopsis thaliana GN=SNL5 PE=3 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 3.360e-19
Identity = 56/111 (50.45%), Postives = 70/111 (63.06%), Query Frame = -2

Query:   51 SVVAAEVEEDGDHEHGNKAESEGEAEGMTDANDVEGDGSSLPYSECFLLTVKPLVKHVGPVLHGKE----KNVQIFYGNDSFYVLFRLHQTLYERIRSAKITSSSAEKKWR 371
            S    +V  D +H+    AESE EA GM ++N+ E DGS   +SE +L  VKPL KHV   L   E     + ++FYGNDS YVLFRLHQ LYERI+SAKI S   E+KW+
Sbjct:  797 SKFGGQVSSDEEHKG---AESENEAGGMVNSNEGE-DGSFFTFSERYLQPVKPLAKHVPGTLQASECDTRNDSRVFYGNDSLYVLFRLHQMLYERIQSAKIHS---ERKWK 900

[Close]

BLAST of GR912923 vs. SwissProt
Match: SNL2_ARATH (Paired amphipathic helix protein Sin3-like 2 OS=Arabidopsis thaliana GN=SNL2 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 1.412e-17
Identity = 59/129 (45.74%), Postives = 77/129 (59.69%), Query Frame = -2

Query:   12 VEEDGDHEH-GNKAESEGEAEGMTDANDVEGDGSSLPYSECFLLTVKPLVKHVGP--VLHGKEKNVQIFYGNDSFYVLFRLHQT------------LYERIRSAKITSSSAEKKWRTCII*SSTCPFPR 353
            VEE+G+H+    KAESEGEAEGM +++ +E  G   P SE  LL+VKPL KH+    ++  K+K+ ++FYGND FYVLFRLH+             LYERI SAK   S +E K R      S  P+ R
Sbjct: 1008 VEEEGEHDEIDGKAESEGEAEGM-ESHLIEDKGL-FPSSERVLLSVKPLSKHIAAAALVDEKKKDSRVFYGNDDFYVLFRLHRVSAIDSYDLLSHILYERILSAKTYCSGSEMKLRNTKDTCSPDPYAR 1134

[Close]

BLAST of GR912923 vs. SwissProt
Match: SNL6_ARATH (Paired amphipathic helix protein Sin3-like 6 OS=Arabidopsis thaliana GN=SNL6 PE=3 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 1.726e-15
Identity = 47/102 (46.08%), Postives = 60/102 (58.82%), Query Frame = -2

Query:   51 HEHGNKA---ESEGEAEGMTDANDVEGDGSSLPYSECFLLTVKPLVKHVGPVLHGKE----KNVQIFYGNDSFYVLFRLHQTLYERIRSAKITSSSAEKKWR 335
            HE  N+       G   G   AN  +G+  S  +SE FL TVKP+ KH+   L   E     + Q+FYGNDS+YVLFRLHQ LYERI++AK     +EKKW+
Sbjct:  828 HEENNRVMNCNGRGSVAGEM-ANGNQGEDGSFAFSERFLQTVKPVAKHLSWPLQASETCSQNDSQVFYGNDSYYVLFRLHQMLYERIQTAK---KHSEKKWK 925

[Close]

BLAST of GR912923 vs. TrEMBL
Match: B9HLV3_POPTR (SIN3 component, histone deacetylase complex OS=Populus trichocarpa GN=SNT901 PE=4 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 3.171e-39
Identity = 80/103 (77.67%), Postives = 89/103 (86.41%), Query Frame = -2

Query:   51 EVEEDGDH-EHGNKAESEGEAEGMTDANDVEGDGSSLPYSECFLLTVKPLVKHVGPVLHGKEKNVQIFYGNDSFYVLFRLHQTLYERIRSAKITSSSAEKKWR 356
            E EEDGDH EH NKAESEGEAEGM DA+DVEG+G+ LP+SE FLL VKPL KHV P LH KEK  ++FYGNDSFYVLFRLHQTLYERI+SAK+ SSSAE+KWR
Sbjct:  975 EHEEDGDHDEHDNKAESEGEAEGMADAHDVEGEGTILPFSERFLLNVKPLAKHVPPSLHDKEKGFRVFYGNDSFYVLFRLHQTLYERIQSAKVNSSSAERKWR 1077

[Close]

BLAST of GR912923 vs. TrEMBL
Match: D7TNJ5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_26.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00020136001 PE=4 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 4.141e-39
Identity = 83/116 (71.55%), Postives = 94/116 (81.03%), Query Frame = -2

Query:   12 EVEEDGDH-EHGNKAESEGEAEGMTDANDVEGDGSSLPYSECFLLTVKPLVKHVGPVLHGKEKNVQIFYGNDSFYVLFRLHQTLYERIRSAKITSSSAEKKWRTCII*SSTCPFPR 356
            E EEDGDH EH NKAESEGEAEGM DA+DVEGDG+ LP+SE FLLTVKPL KHV P L  KEKN ++FYGNDSFYVLFRLHQTLYER++SAK+ SSS E+KWR     +ST  + R
Sbjct: 1086 EHEEDGDHDEHDNKAESEGEAEGMADAHDVEGDGTLLPFSERFLLTVKPLAKHVPPSLQDKEKNSRVFYGNDSFYVLFRLHQTLYERMQSAKLNSSSGERKWRASSDTNSTDLYAR 1201

[Close]

BLAST of GR912923 vs. TrEMBL
Match: B9HU88_POPTR (SIN3 component, histone deacetylase complex OS=Populus trichocarpa GN=SNT902 PE=4 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 2.684e-38
Identity = 80/103 (77.67%), Postives = 88/103 (85.44%), Query Frame = -2

Query:   51 EVEEDGDH-EHGNKAESEGEAEGMTDANDVEGDGSSLPYSECFLLTVKPLVKHVGPVLHGKEKNVQIFYGNDSFYVLFRLHQTLYERIRSAKITSSSAEKKWR 356
            E EEDGDH EH  KAESEGEAEGM DA+DVEGDG+ LP+SE FLL VKPL KHV P LH KEK  ++FYGNDSFYVLFRLHQTLYERI+SAK+ SSSAE+KWR
Sbjct: 1038 EHEEDGDHDEHDIKAESEGEAEGMADAHDVEGDGTMLPFSERFLLNVKPLAKHVPPSLHDKEKVSRVFYGNDSFYVLFRLHQTLYERIQSAKVNSSSAERKWR 1140

[Close]

BLAST of GR912923 vs. TrEMBL
Match: B9S2H7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0699610 PE=4 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 7.810e-38
Identity = 78/103 (75.73%), Postives = 88/103 (85.44%), Query Frame = -2

Query:   51 EVEEDGDH-EHGNKAESEGEAEGMTDANDVEGDGSSLPYSECFLLTVKPLVKHVGPVLHGKEKNVQIFYGNDSFYVLFRLHQTLYERIRSAKITSSSAEKKWR 356
            E EE G+H EH NKAESEGEAEGM DA+DVEG+G+ LP+SE FLL VKPL KHV P LH K+K  ++FYGNDSFYVLFRLHQTLYERI+SAKI SSSAE+KWR
Sbjct: 1105 EHEEAGEHDEHDNKAESEGEAEGMADAHDVEGEGTMLPFSERFLLNVKPLAKHVPPALHDKDKGSRVFYGNDSFYVLFRLHQTLYERIQSAKINSSSAERKWR 1207

[Close]

BLAST of GR912923 vs. TrEMBL
Match: Q658A2_ORYSJ (Transcriptional co-repressor-like OS=Oryza sativa subsp. japonica GN=P0482C06.33 PE=4 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.335e-29
Identity = 73/105 (69.52%), Postives = 82/105 (78.10%), Query Frame = -2

Query:   48 EVEEDGDHEHGN-KAESEGEAEGMTDANDVEGDGSSLPYSECFLLTVKPLVKHVGPVLHGK-EKNVQIFYGNDSFYVLFRLHQTLYERIRSAKITSSSAEKKWRT 356
            E EED DH+  + KAESEGEAEG T+ +DVEG G SLP SE FL +VKPL KHV   LH + EK+ +IFYGNDSFYVLFRLHQ LYER+ SAK  SSSAEKKWRT
Sbjct:  889 EEEEDMDHDDQDAKAESEGEAEGTTETHDVEG-GISLPLSERFLHSVKPLAKHVPTALHDRDEKSSRIFYGNDSFYVLFRLHQILYERLLSAKTNSSSAEKKWRT 992

[Close]

BLAST of GR912923 vs. TrEMBL
Match: Q0JRB9_ORYSJ (Os01g0109700 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os01g0109700 PE=4 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.335e-29
Identity = 73/105 (69.52%), Postives = 82/105 (78.10%), Query Frame = -2

Query:   48 EVEEDGDHEHGN-KAESEGEAEGMTDANDVEGDGSSLPYSECFLLTVKPLVKHVGPVLHGK-EKNVQIFYGNDSFYVLFRLHQTLYERIRSAKITSSSAEKKWRT 356
            E EED DH+  + KAESEGEAEG T+ +DVEG G SLP SE FL +VKPL KHV   LH + EK+ +IFYGNDSFYVLFRLHQ LYER+ SAK  SSSAEKKWRT
Sbjct:  972 EEEEDMDHDDQDAKAESEGEAEGTTETHDVEG-GISLPLSERFLHSVKPLAKHVPTALHDRDEKSSRIFYGNDSFYVLFRLHQILYERLLSAKTNSSSAEKKWRT 1075

[Close]

BLAST of GR912923 vs. TrEMBL
Match: B9EYU3_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_00078 PE=4 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.335e-29
Identity = 73/105 (69.52%), Postives = 82/105 (78.10%), Query Frame = -2

Query:   48 EVEEDGDHEHGN-KAESEGEAEGMTDANDVEGDGSSLPYSECFLLTVKPLVKHVGPVLHGK-EKNVQIFYGNDSFYVLFRLHQTLYERIRSAKITSSSAEKKWRT 356
            E EED DH+  + KAESEGEAEG T+ +DVEG G SLP SE FL +VKPL KHV   LH + EK+ +IFYGNDSFYVLFRLHQ LYER+ SAK  SSSAEKKWRT
Sbjct: 1064 EEEEDMDHDDQDAKAESEGEAEGTTETHDVEG-GISLPLSERFLHSVKPLAKHVPTALHDRDEKSSRIFYGNDSFYVLFRLHQILYERLLSAKTNSSSAEKKWRT 1167

[Close]

BLAST of GR912923 vs. TrEMBL
Match: B8ACV2_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_00086 PE=4 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.335e-29
Identity = 73/105 (69.52%), Postives = 82/105 (78.10%), Query Frame = -2

Query:   48 EVEEDGDHEHGN-KAESEGEAEGMTDANDVEGDGSSLPYSECFLLTVKPLVKHVGPVLHGK-EKNVQIFYGNDSFYVLFRLHQTLYERIRSAKITSSSAEKKWRT 356
            E EED DH+  + KAESEGEAEG T+ +DVEG G SLP SE FL +VKPL KHV   LH + EK+ +IFYGNDSFYVLFRLHQ LYER+ SAK  SSSAEKKWRT
Sbjct: 1006 EEEEDMDHDDQDAKAESEGEAEGTTETHDVEG-GISLPLSERFLHSVKPLAKHVPTALHDRDEKSSRIFYGNDSFYVLFRLHQILYERLLSAKTNSSSAEKKWRT 1109

[Close]

BLAST of GR912923 vs. TrEMBL
Match: B7F7C1_ORYSJ (cDNA clone:J033007H10, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.335e-29
Identity = 73/105 (69.52%), Postives = 82/105 (78.10%), Query Frame = -2

Query:   48 EVEEDGDHEHGN-KAESEGEAEGMTDANDVEGDGSSLPYSECFLLTVKPLVKHVGPVLHGK-EKNVQIFYGNDSFYVLFRLHQTLYERIRSAKITSSSAEKKWRT 356
            E EED DH+  + KAESEGEAEG T+ +DVEG G SLP SE FL +VKPL KHV   LH + EK+ +IFYGNDSFYVLFRLHQ LYER+ SAK  SSSAEKKWRT
Sbjct:  971 EEEEDMDHDDQDAKAESEGEAEGTTETHDVEG-GISLPLSERFLHSVKPLAKHVPTALHDRDEKSSRIFYGNDSFYVLFRLHQILYERLLSAKTNSSSAEKKWRT 1074

[Close]

BLAST of GR912923 vs. TrEMBL
Match: D7TWZ0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_66.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00032579001 PE=4 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 5.074e-29
Identity = 68/104 (65.38%), Postives = 79/104 (75.96%), Query Frame = -2

Query:   51 EVEEDGDHEH-GNKAESEGEAEGMTDANDVEGDGSSLPYSECFLLTVKPLVKHVGPVLHGKEKN-VQIFYGNDSFYVLFRLHQTLYERIRSAKITSSSAEKKWR 356
            E EED +H+    KAESEGEA+G+ DAN V G+G  LP SE FL TVKPL KHV   LH KEKN  ++FYGND+FYVLFRLH+ LYERI SAK+ S+SAE KWR
Sbjct: 1010 EEEEDAEHDELDGKAESEGEADGVADANFVGGNGVILPLSERFLPTVKPLAKHVASSLHDKEKNDSRVFYGNDTFYVLFRLHRVLYERILSAKVNSTSAEMKWR 1113

[Close]

BLAST of GR912923 vs. TAIR peptide
Match: AT1G24190.2 (| Symbols: SNL3 | SIN3-like 3 | chr1:8563858-8569927 REVERSE LENGTH=1326)

HSP 1 Score: 122.479 bits (306), Expect = 5.965e-29
Identity = 66/107 (61.68%), Postives = 78/107 (72.90%), Query Frame = -2

Query:   48 EEDGDHEHGNKAESEGEAEGMTDANDVEGDGSSLPYSECFLLTVKPLVKHVGPV--LHGKEK----NVQIFYGNDSFYVLFRLHQTLYERIRSAKITSSSAEKKWRT 350
            + + D ++ NK ESEGEAE M DA+D E +GS+LP S  FLL VKPLVK+V     LH K+K    N Q+FYGNDSFYVLFRLH+ LYERI SAK+ SSS E KWRT
Sbjct:  979 DPEDDLDNNNKGESEGEAECMADAHDAEENGSALPVSARFLLHVKPLVKYVPSAIALHDKDKDSLKNSQVFYGNDSFYVLFRLHRILYERILSAKVNSSSPEGKWRT 1085

[Close]

BLAST of GR912923 vs. TAIR peptide
Match: AT1G24190.1 (| Symbols: SIN3, ATSIN3, SNL3 | SIN3-like 3 | chr1:8563858-8569927 REVERSE LENGTH=1330)

HSP 1 Score: 122.479 bits (306), Expect = 5.965e-29
Identity = 66/107 (61.68%), Postives = 78/107 (72.90%), Query Frame = -2

Query:   48 EEDGDHEHGNKAESEGEAEGMTDANDVEGDGSSLPYSECFLLTVKPLVKHVGPV--LHGKEK----NVQIFYGNDSFYVLFRLHQTLYERIRSAKITSSSAEKKWRT 350
            + + D ++ NK ESEGEAE M DA+D E +GS+LP S  FLL VKPLVK+V     LH K+K    N Q+FYGNDSFYVLFRLH+ LYERI SAK+ SSS E KWRT
Sbjct:  983 DPEDDLDNNNKGESEGEAECMADAHDAEENGSALPVSARFLLHVKPLVKYVPSAIALHDKDKDSLKNSQVFYGNDSFYVLFRLHRILYERILSAKVNSSSPEGKWRT 1089

[Close]

BLAST of GR912923 vs. TAIR peptide
Match: AT1G70060.1 (| Symbols: SNL4 | SIN3-like 4 | chr1:26383789-26389568 FORWARD LENGTH=1326)

HSP 1 Score: 111.309 bits (277), Expect = 1.375e-25
Identity = 65/108 (60.19%), Postives = 76/108 (70.37%), Query Frame = -2

Query:   48 EEDGDHEHGNKAESEGEAE-GMTDAND-VEGDGSSLPYSECFLLTVKPLVKHVGPVLHGKE-----KNVQIFYGNDSFYVLFRLHQTLYERIRSAKITSSSAEKKWRT 350
            E+D DH   NK ESEGEAE GM+D +D  EGD   L  S   LL VKPL K+V P L+ K+     KN Q+FYGNDSFYVLFRLHQ LY+RI SAKI SSS ++KW+T
Sbjct:  971 EDDIDH---NKVESEGEAEEGMSDGHDDTEGDMPVLSISVKNLLHVKPLAKYVPPALYDKDNDDSRKNSQVFYGNDSFYVLFRLHQILYDRILSAKINSSSPDRKWKT 1075

[Close]

BLAST of GR912923 vs. TAIR peptide
Match: AT3G01320.2 (| Symbols: SNL1 | SIN3-like 1 | chr3:106730-113197 FORWARD LENGTH=1360)

HSP 1 Score: 102.064 bits (253), Expect = 8.343e-23
Identity = 58/100 (58.00%), Postives = 70/100 (70.00%), Query Frame = -2

Query:   57 EEDGDHEH-GNKAESEGEAEGMTDANDVEGDGSSLPYSECFLLTVKPLVKHVGPVL-HGKEKNVQIFYGNDSFYVLFRLHQTLYERIRSAKITSSSAEKK 350
            EE+G+H+    KAESEGEAEGM D + +EG+   LP SE  LL+V+PL KHV  VL   + K++Q+FYGND FYVLFRLHQ LYERI  AK   S  E K
Sbjct: 1023 EENGEHDEIDGKAESEGEAEGM-DPHLLEGESELLPQSERVLLSVRPLSKHVAAVLCDERTKDLQVFYGNDDFYVLFRLHQILYERILYAKRNCSGGELK 1121

[Close]

BLAST of GR912923 vs. TAIR peptide
Match: AT3G01320.1 (| Symbols: SNL1 | SIN3-like 1 | chr3:106730-113197 FORWARD LENGTH=1372)

HSP 1 Score: 102.064 bits (253), Expect = 8.343e-23
Identity = 58/100 (58.00%), Postives = 70/100 (70.00%), Query Frame = -2

Query:   57 EEDGDHEH-GNKAESEGEAEGMTDANDVEGDGSSLPYSECFLLTVKPLVKHVGPVL-HGKEKNVQIFYGNDSFYVLFRLHQTLYERIRSAKITSSSAEKK 350
            EE+G+H+    KAESEGEAEGM D + +EG+   LP SE  LL+V+PL KHV  VL   + K++Q+FYGND FYVLFRLHQ LYERI  AK   S  E K
Sbjct: 1035 EENGEHDEIDGKAESEGEAEGM-DPHLLEGESELLPQSERVLLSVRPLSKHVAAVLCDERTKDLQVFYGNDDFYVLFRLHQILYERILYAKRNCSGGELK 1133

[Close]

BLAST of GR912923 vs. TAIR peptide
Match: AT5G15020.2 (| Symbols: SNL2 | SIN3-like 2 | chr5:4859408-4865569 REVERSE LENGTH=1355)

HSP 1 Score: 96.6709 bits (239), Expect = 3.505e-21
Identity = 59/117 (50.43%), Postives = 77/117 (65.81%), Query Frame = -2

Query:   12 VEEDGDHEH-GNKAESEGEAEGMTDANDVEGDGSSLPYSECFLLTVKPLVKHVGP--VLHGKEKNVQIFYGNDSFYVLFRLHQTLYERIRSAKITSSSAEKKWRTCII*SSTCPFPR 353
            VEE+G+H+    KAESEGEAEGM +++ +E  G   P SE  LL+VKPL KH+    ++  K+K+ ++FYGND FYVLFRLH+ LYERI SAK   S +E K R      S  P+ R
Sbjct: 1008 VEEEGEHDEIDGKAESEGEAEGM-ESHLIEDKGL-FPSSERVLLSVKPLSKHIAAAALVDEKKKDSRVFYGNDDFYVLFRLHRILYERILSAKTYCSGSEMKLRNTKDTCSPDPYAR 1122

[Close]

BLAST of GR912923 vs. TAIR peptide
Match: AT1G59890.4 (| Symbols: SNL5 | SIN3-like 5 | chr1:22044326-22050812 FORWARD LENGTH=1152)

HSP 1 Score: 93.5893 bits (231), Expect = 2.967e-20
Identity = 56/111 (50.45%), Postives = 70/111 (63.06%), Query Frame = -2

Query:   51 SVVAAEVEEDGDHEHGNKAESEGEAEGMTDANDVEGDGSSLPYSECFLLTVKPLVKHVGPVLHGKE----KNVQIFYGNDSFYVLFRLHQTLYERIRSAKITSSSAEKKWR 371
            S    +V  D +H+    AESE EA GM ++N+ E DGS   +SE +L  VKPL KHV   L   E     + ++FYGNDS YVLFRLHQ LYERI+SAKI S   E+KW+
Sbjct:  800 SKFGGQVSSDEEHKG---AESENEAGGMVNSNEGE-DGSFFTFSERYLQPVKPLAKHVPGTLQASECDTRNDSRVFYGNDSLYVLFRLHQMLYERIQSAKIHS---ERKWK 903

[Close]

BLAST of GR912923 vs. TAIR peptide
Match: AT1G59890.2 (| Symbols: SNL5 | SIN3-like 5 | chr1:22044326-22050670 FORWARD LENGTH=1167)

HSP 1 Score: 93.5893 bits (231), Expect = 2.967e-20
Identity = 56/111 (50.45%), Postives = 70/111 (63.06%), Query Frame = -2

Query:   51 SVVAAEVEEDGDHEHGNKAESEGEAEGMTDANDVEGDGSSLPYSECFLLTVKPLVKHVGPVLHGKE----KNVQIFYGNDSFYVLFRLHQTLYERIRSAKITSSSAEKKWR 371
            S    +V  D +H+    AESE EA GM ++N+ E DGS   +SE +L  VKPL KHV   L   E     + ++FYGNDS YVLFRLHQ LYERI+SAKI S   E+KW+
Sbjct:  805 SKFGGQVSSDEEHKG---AESENEAGGMVNSNEGE-DGSFFTFSERYLQPVKPLAKHVPGTLQASECDTRNDSRVFYGNDSLYVLFRLHQMLYERIQSAKIHS---ERKWK 908

[Close]

BLAST of GR912923 vs. TAIR peptide
Match: AT1G59890.3 (| Symbols: SNL5 | SIN3-like 5 | chr1:22044326-22050670 FORWARD LENGTH=1158)

HSP 1 Score: 93.5893 bits (231), Expect = 2.967e-20
Identity = 56/111 (50.45%), Postives = 70/111 (63.06%), Query Frame = -2

Query:   51 SVVAAEVEEDGDHEHGNKAESEGEAEGMTDANDVEGDGSSLPYSECFLLTVKPLVKHVGPVLHGKE----KNVQIFYGNDSFYVLFRLHQTLYERIRSAKITSSSAEKKWR 371
            S    +V  D +H+    AESE EA GM ++N+ E DGS   +SE +L  VKPL KHV   L   E     + ++FYGNDS YVLFRLHQ LYERI+SAKI S   E+KW+
Sbjct:  796 SKFGGQVSSDEEHKG---AESENEAGGMVNSNEGE-DGSFFTFSERYLQPVKPLAKHVPGTLQASECDTRNDSRVFYGNDSLYVLFRLHQMLYERIQSAKIHS---ERKWK 899

[Close]

BLAST of GR912923 vs. TAIR peptide
Match: AT1G59890.1 (| Symbols: SNL5 | SIN3-like 5 | chr1:22044326-22050670 FORWARD LENGTH=1162)

HSP 1 Score: 93.5893 bits (231), Expect = 2.967e-20
Identity = 56/111 (50.45%), Postives = 70/111 (63.06%), Query Frame = -2

Query:   51 SVVAAEVEEDGDHEHGNKAESEGEAEGMTDANDVEGDGSSLPYSECFLLTVKPLVKHVGPVLHGKE----KNVQIFYGNDSFYVLFRLHQTLYERIRSAKITSSSAEKKWR 371
            S    +V  D +H+    AESE EA GM ++N+ E DGS   +SE +L  VKPL KHV   L   E     + ++FYGNDS YVLFRLHQ LYERI+SAKI S   E+KW+
Sbjct:  800 SKFGGQVSSDEEHKG---AESENEAGGMVNSNEGE-DGSFFTFSERYLQPVKPLAKHVPGTLQASECDTRNDSRVFYGNDSLYVLFRLHQMLYERIQSAKIHS---ERKWK 903

The following BLAST results are available for this feature:

BLAST of GR912923 vs. SwissProt
BLAST of GR912923 vs. TrEMBL
BLAST of GR912923 vs. TAIR peptide

BLAST of GR912923 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 6


Match Name	E-value	Identity	Description
SNL3_ARATH	6.754e-28	61.68	Paired amphipathic helix protein Sin3-like 3 OS=Ar...	[more]
SNL4_ARATH	1.557e-24	60.19	Paired amphipathic helix protein Sin3-like 4 OS=Ar...	[more]
SNL1_ARATH	9.446e-22	58.00	Paired amphipathic helix protein Sin3-like 1 OS=Ar...	[more]
SNL5_ARATH	3.360e-19	50.45	Paired amphipathic helix protein Sin3-like 5 OS=Ar...	[more]
SNL2_ARATH	1.412e-17	45.74	Paired amphipathic helix protein Sin3-like 2 OS=Ar...	[more]
SNL6_ARATH	1.726e-15	46.08	Paired amphipathic helix protein Sin3-like 6 OS=Ar...	[more]

BLAST of GR912923 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9HLV3_POPTR	3.171e-39	77.67	SIN3 component, histone deacetylase complex OS=Pop...	[more]
D7TNJ5_VITVI	4.141e-39	71.55	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9HU88_POPTR	2.684e-38	77.67	SIN3 component, histone deacetylase complex OS=Pop...	[more]
B9S2H7_RICCO	7.810e-38	75.73	Putative uncharacterized protein OS=Ricinus commun...	[more]
Q658A2_ORYSJ	1.335e-29	69.52	Transcriptional co-repressor-like OS=Oryza sativa ...	[more]
Q0JRB9_ORYSJ	1.335e-29	69.52	Os01g0109700 protein (Fragment) OS=Oryza sativa su...	[more]
B9EYU3_ORYSJ	1.335e-29	69.52	Putative uncharacterized protein OS=Oryza sativa s...	[more]
B8ACV2_ORYSI	1.335e-29	69.52	Putative uncharacterized protein OS=Oryza sativa s...	[more]
B7F7C1_ORYSJ	1.335e-29	69.52	cDNA clone:J033007H10, full insert sequence OS=Ory...	[more]
D7TWZ0_VITVI	5.074e-29	65.38	Whole genome shotgun sequence of line PN40024, sca...	[more]

BLAST of GR912923 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT1G24190.2	5.965e-29	61.68	\| Symbols: SNL3 \| SIN3-like 3 \| chr1:8563858-85699...	[more]
AT1G24190.1	5.965e-29	61.68	\| Symbols: SIN3, ATSIN3, SNL3 \| SIN3-like 3 \| chr1...	[more]
AT1G70060.1	1.375e-25	60.19	\| Symbols: SNL4 \| SIN3-like 4 \| chr1:26383789-2638...	[more]
AT3G01320.2	8.343e-23	58.00	\| Symbols: SNL1 \| SIN3-like 1 \| chr3:106730-113197...	[more]
AT3G01320.1	8.343e-23	58.00	\| Symbols: SNL1 \| SIN3-like 1 \| chr3:106730-113197...	[more]
AT5G15020.2	3.505e-21	50.43	\| Symbols: SNL2 \| SIN3-like 2 \| chr5:4859408-48655...	[more]
AT1G59890.4	2.967e-20	50.45	\| Symbols: SNL5 \| SIN3-like 5 \| chr1:22044326-2205...	[more]
AT1G59890.2	2.967e-20	50.45	\| Symbols: SNL5 \| SIN3-like 5 \| chr1:22044326-2205...	[more]
AT1G59890.3	2.967e-20	50.45	\| Symbols: SNL5 \| SIN3-like 5 \| chr1:22044326-2205...	[more]
AT1G59890.1	2.967e-20	50.45	\| Symbols: SNL5 \| SIN3-like 5 \| chr1:22044326-2205...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 37..56 score
None	No IPR available	PANTHER	PTHR12346	SIN3B-RELATED	coord: 66..93 score: 5.2

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR912923 ID=GR912923; Name=GR912923; organism=Cicer arietinum; type=EST; length=372bp
TGCCATTTCGAGCGGGGAAACGGGCAGGTAGAGCTTCAAATGATACAAGT
TCTCCATTTCTTTTCAGCAGAAGATGAAGTAATCTTTGCTGATCGTATTC
TCTCATACAATGTCTGATGAAGTCTAAATAGCACATAAAAGGAGTCATTT
CCATAAAAAATTTGAACGTTCTTTTCTTTCCCATGCAGCACTGGGCCAAC
ATGTTTTACCAGAGGCTTAACAGTGAGAAGAAAGCATTCTGAATATGGCA
ATGAGGATCCATCTCCTTCAACATCATTGGCATCAGTCATTCCTTCAGCT
TCACCTTCACTCTCAGCCTTGTTACCATGTTCATGATCCCCATCCTCTTC
AACCTCGGCCGCGACCACGCTA

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