GR916927

EST Overview
NameGR916927
Unique NameGR916927
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length215
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Homology
BLAST of GR916927 vs. TrEMBL
Match: D7U3N2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_229.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00004707001 PE=4 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 6.595e-16
Identity = 42/56 (75.00%), Postives = 48/56 (85.71%), Query Frame = 1
Query:   25 VPTSQSTMAMSSLVPSASMEPISEWTADNNQMPKPNRSVSEPDIGRSPRQETTSSD 192
            V +SQSTMAMSSL+PSASMEPISEWTAD N+M  PNRSVSEPD GR+PRQ  +S +
Sbjct:  579 VSSSQSTMAMSSLMPSASMEPISEWTADGNRMTIPNRSVSEPDFGRTPRQADSSKE 634          
BLAST of GR916927 vs. TrEMBL
Match: A5AIF5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013511 PE=4 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 6.595e-16
Identity = 42/56 (75.00%), Postives = 48/56 (85.71%), Query Frame = 1
Query:   25 VPTSQSTMAMSSLVPSASMEPISEWTADNNQMPKPNRSVSEPDIGRSPRQETTSSD 192
            V +SQSTMAMSSL+PSASMEPISEWTAD N+M  PNRSVSEPD GR+PRQ  +S +
Sbjct: 1044 VSSSQSTMAMSSLMPSASMEPISEWTADGNRMTIPNRSVSEPDFGRTPRQADSSKE 1099          
BLAST of GR916927 vs. TrEMBL
Match: B9SSE7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1060300 PE=4 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 7.291e-15
Identity = 42/55 (76.36%), Postives = 45/55 (81.82%), Query Frame = 1
Query:   25 VPTSQSTMAMSSLVPSASMEPISEWTADNNQMPKPNRSVSEPDIGRSPRQETTSS 189
            V  SQSTMAMSSL+PSASMEPISEW AD N+M   NRSVSEPD GR+PRQ  TSS
Sbjct: 1041 VSASQSTMAMSSLMPSASMEPISEWAADGNRMTMHNRSVSEPDFGRTPRQVGTSS 1095          
BLAST of GR916927 vs. TrEMBL
Match: B9GYB6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_799706 PE=4 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.624e-14
Identity = 41/55 (74.55%), Postives = 44/55 (80.00%), Query Frame = 1
Query:   25 VPTSQSTMAMSSLVPSASMEPISEWTADNNQMPKPNRSVSEPDIGRSPRQETTSS 189
            V  SQSTMAMSSL+PSASMEPISEW AD N+M   NRSVSEPD GRSPRQ+   S
Sbjct:  989 VSGSQSTMAMSSLMPSASMEPISEWAADGNRMTMHNRSVSEPDFGRSPRQDQVDS 1043          
BLAST of GR916927 vs. TrEMBL
Match: D7SLQ7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_21.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00018158001 PE=4 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.053e-13
Identity = 36/56 (64.29%), Postives = 46/56 (82.14%), Query Frame = 1
Query:   25 VPTSQSTMAMSSLVPSASMEPISEWTADNNQMPKPNRSVSEPDIGRSPRQETTSSD 192
            V  SQSTMAMSSL+PSASMEPIS+W  + N++ KPNRS+SEPD GR+PR+  +S +
Sbjct:  972 VSNSQSTMAMSSLMPSASMEPISDWMGEGNRLTKPNRSISEPDFGRTPRKVDSSKE 1027          
BLAST of GR916927 vs. TrEMBL
Match: A5B8B2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_000641 PE=4 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.053e-13
Identity = 36/56 (64.29%), Postives = 46/56 (82.14%), Query Frame = 1
Query:   25 VPTSQSTMAMSSLVPSASMEPISEWTADNNQMPKPNRSVSEPDIGRSPRQETTSSD 192
            V  SQSTMAMSSL+PSASMEPIS+W  + N++ KPNRS+SEPD GR+PR+  +S +
Sbjct: 1035 VSNSQSTMAMSSLMPSASMEPISDWMGEGNRLTKPNRSISEPDFGRTPRKVDSSKE 1090          
BLAST of GR916927 vs. TrEMBL
Match: B9MUP4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_796290 PE=4 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.745e-11
Identity = 36/50 (72.00%), Postives = 38/50 (76.00%), Query Frame = 1
Query:   25 VPTSQSTMAMSSLVPSASMEPISEWTADNNQMPKPNRSVSEPDIGRSPRQ 174
            V  SQSTM MSSL+ SAS EPISEW AD N+M   NRSVSEPD GRSP Q
Sbjct:  996 VSGSQSTMTMSSLISSASTEPISEWAADGNKMTMHNRSVSEPDFGRSPIQ 1045          
BLAST of GR916927 vs. TAIR peptide
Match: AT5G47480.1 (| Symbols: | RGPR-related | chr5:19257420-19263132 FORWARD LENGTH=1350)

HSP 1 Score: 56.225 bits (134), Expect = 4.788e-9
Identity = 27/52 (51.92%), Postives = 34/52 (65.38%), Query Frame = 1
Query:   34 SQSTMAMSSLVPSASMEPISEWTADNNQMPKPNRSVSEPDIGRSPRQETTSS 189
            SQS   MSSL+P AS+EP+ EW  +   M   +RSVSEPD  R+P Q+ T S
Sbjct:  994 SQSANTMSSLMPPASIEPVHEWGGNGRTMAAHSRSVSEPDFSRTPIQDQTDS 1045          
BLAST of GR916927 vs. TAIR peptide
Match: AT5G47490.1 (| Symbols: | RGPR-related | chr5:19264675-19270487 FORWARD LENGTH=1361)

HSP 1 Score: 50.447 bits (119), Expect = 2.627e-7
Identity = 27/52 (51.92%), Postives = 31/52 (59.62%), Query Frame = 1
Query:   34 SQSTMAMSSLVPSASMEPISEWTADNNQMPKPNRSVSEPDIGRSPRQETTSS 189
            SQS   MSSL+P AS+EP  E      +M    RSVSEPD GR+P QE   S
Sbjct: 1018 SQSVNTMSSLMPPASVEPTHESGGSGRRMAVHTRSVSEPDFGRTPIQEMADS 1069          
The following BLAST results are available for this feature:
BLAST of GR916927 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 7
Match NameE-valueIdentityDescription
D7U3N2_VITVI6.595e-1675.00Whole genome shotgun sequence of line PN40024, sca... [more]
A5AIF5_VITVI6.595e-1675.00Putative uncharacterized protein OS=Vitis vinifera... [more]
B9SSE7_RICCO7.291e-1576.36Putative uncharacterized protein OS=Ricinus commun... [more]
B9GYB6_POPTR1.624e-1474.55Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7SLQ7_VITVI1.053e-1364.29Whole genome shotgun sequence of line PN40024, sca... [more]
A5B8B2_VITVI1.053e-1364.29Putative uncharacterized protein OS=Vitis vinifera... [more]
B9MUP4_POPTR3.745e-1172.00Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
back to top
BLAST of GR916927 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G47480.14.788e-951.92| Symbols: | RGPR-related | chr5:19257420-1926313... [more]
AT5G47490.12.627e-751.92| Symbols: | RGPR-related | chr5:19264675-1927048... [more]
back to top
Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR916927 ID=GR916927; Name=GR916927; organism=Cicer arietinum; type=EST; length=215bp
GATTTCGAGCGGCCGCCCGGGGAGGTACCCACTAGCCAGTCAACAATGGC
CATGTCATCTTTAGTTCCATCTGCTTCAATGGAACCCATAAGTGAGTGGA
CAGCTGACAATAATCAAATGCCCAAGCCTAATAGAAGTGTTTCAGAGCCA
GATATTGGTAGAAGCCCAAGACAGGAAACGACATCGTCTGATGTACCTCG
GCCGCGACCACGCTA
back to top