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EST Overview
Name | HO067021 |
Unique Name | HO067021 |
Type | EST |
Organism | Cicer arietinum (chickpea) |
Sequence length | 850 |
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | SEG | seg | seg | coord: 13..19 score: NAcoord: 23..63 score |
None | No IPR available | SEG | seg | seg | coord: 3..15 score: NAcoord: 16..45 score: NAcoord: 50..56 score: NAcoord: 78..94 score: NAcoord: 118..127 score: NAcoord: 128..145 score |
None | No IPR available | SEG | seg | seg | coord: 14..23 score: NAcoord: 42..47 score: NAcoord: 48..67 score: NAcoord: 68..75 score: NAcoord: 79..88 score: NAcoord: 96..103 score: NAcoord: 108..128 score: NAcoord: 139..153 score: NAcoord: 177..186 score: NAcoord: 225..241 score: NAcoord: 252..263 score: NAcoord: 265..275 score |
None | No IPR available | SEG | seg | seg | coord: 26..40 score: NAcoord: 49..59 score |
None | No IPR available | SEG | seg | seg | coord: 1..15 score: NAcoord: 55..74 score: NAcoord: 79..97 score: NAcoord: 98..109 score: NAcoord: 114..120 score: NAcoord: 123..133 score: NAcoord: 147..156 score |
None | No IPR available | SEG | seg | seg | coord: 1..10 score: NAcoord: 12..21 score: NAcoord: 23..34 score: NAcoord: 36..54 score: NAcoord: 55..64 score: NAcoord: 68..72 score: NAcoord: 91..111 score: NAcoord: 126..141 score: NAcoord: 147..156 score: NAcoord: 164..174 score: NAcoord: 175..183 score: NAcoord: 194..233 score: NAcoord: 263..269 score |
None | No IPR available | SEG | seg | seg | coord: 1..8 score: NAcoord: 13..24 score: NAcoord: 30..53 score: NAcoord: 57..75 score: NAcoord: 89..121 score: NAcoord: 128..149 score: NAcoord: 151..157 score: NAcoord: 160..172 score: NAcoord: 205..217 score: NAcoord: 224..243 score: NAcoord: 264..270 score |
None | No IPR available | SEG | seg | seg | coord: 5..16 score: NAcoord: 34..53 score: NAcoord: 54..65 score: NAcoord: 67..73 score: NAcoord: 87..107 score |
None | No IPR available | SEG | seg | seg | coord: 14..21 score: NAcoord: 25..55 score: NAcoord: 56..67 score: NAcoord: 76..81 score: NAcoord: 89..98 score |
IPR001190 | Speract/scavenger receptor | PROFILE | PS50287 | SRCR_2 | coord: 70..192 score: 7 |
Properties
Property Name | Value |
Singlet in analysis | Cicer arietinum unigene v1 |
Sequences
The
following sequences are available for this feature:
EST sequence >HO067021 ID=HO067021; Name=HO067021; organism=Cicer arietinum; type=EST; length=850bp AAANANANGGAGGGGNGCTCCCAAGGGCGACCAGCAGGNGGNCGCNAAAN AANTAGNGATTACCCNTNNGGGGGNCNGNAAGGAACAAANNAGAATGTCN CCNAANCCCNTTTGGGGGGAGNAACAAGGAAGCGNNNCGANAANAGAGGA AAAGAACAAGAAANGAGNAAAGGAGGNGGCCCCAAGAAAANGCAAAANAN CTAAGGGAAAGAGNAGNNCANNNNANCGAANAGANGAAACAAGGGNAAAA AACCAAAAANGCAACNANAAGCANGGGNCNATAAGNCNCGAAAAANATAG AACACANCNAAGGNCGNGGCAAAANAANAACNANAANNANNAAGNAAAAA ANGNGATAANCAAAAGNAANACAAAACAACCNGACAANAAGNAACAAAGC CNNGAAGGAGAACGACANCCAAACANNNGAAAACGNCGNACGGCAACANG GNCAANANANAAAGCANGAATGCCCGNAAGNGGNNAGCANAAAAACGACC AGANAGCTACCGAGAAANANAANNNACACCGANGAAAANACGANAACNAA NAANAAAANCAANAANNCCGAAAAACNCAAAAAGCAANCGAGCAACCANN AANNANAGACAGNAAAACCCCCNAGAACAANNANAGAGNNANAGCNAAAG GAANCCAANNAANAANAACNAAANNANACCATNANANAAAAAGNAAANGG AGANAGANNGAGAANGNAGNAGAAAAATNGAAAAACAAAACCNNAGNNAG ANCCCAANACATCNNGAAACATAACAANGCNNNGAAAANGGGGAAAAAAC CNNANAANANAGCANANNNGNCCGNGNGNNACNCAAAAANAAANCACANC back to top
Annotated Terms
The
following terms have been associated with
this EST:
Vocabulary: Molecular Function
Term | Definition |
GO:0005044 | scavenger receptor activity |
Vocabulary: Cellular Component
Term | Definition |
GO:0016020 | membrane |
Vocabulary: INTERPRO
Term | Definition |
IPR001190 | SRCR |
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