HO067160

EST Overview


Name	HO067160
Unique Name	HO067160
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	735

Libraries


Library Name	Type
LIBEST_026413 Chickpea drought stressed cDNA SSH library AS2	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of HO067160 vs. SwissProt
Match: RBS_GLYTA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Glycine tabacina GN=RBCS PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.126e-16
Identity = 41/58 (70.69%), Postives = 44/58 (75.86%), Query Frame = -3

Query:  176 YWXMXKLPLXGCTEAVQVLKELQEVVKAXPNAFVRIXGFXNVRQVQCISFIAXXPKEF 349
            YW M KLP+ GCT+A QVLKELQE   A PNAF+RI GF NVRQVQCISFIA  P  F
Sbjct:  121 YWTMWKLPMFGCTDASQVLKELQEAKTAYPNAFIRIIGFDNVRQVQCISFIAYKPPSF 178

[Close]

BLAST of HO067160 vs. SwissProt
Match: RBS4_SOYBN (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Glycine max GN=RBCS-4 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.275e-16
Identity = 40/58 (68.97%), Postives = 43/58 (74.14%), Query Frame = -3

Query:  176 YWXMXKLPLXGCTEAVQVLKELQEVVKAXPNAFVRIXGFXNVRQVQCISFIAXXPKEF 349
            YW M KLP+ GCT+A QVLKELQE   A PN F+RI GF NVRQVQCISFIA  P  F
Sbjct:  121 YWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPPSF 178

[Close]

BLAST of HO067160 vs. SwissProt
Match: RBS_GLYTO (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Glycine tomentella GN=RBCS PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.278e-16
Identity = 40/58 (68.97%), Postives = 43/58 (74.14%), Query Frame = -3

Query:  176 YWXMXKLPLXGCTEAVQVLKELQEVVKAXPNAFVRIXGFXNVRQVQCISFIAXXPKEF 349
            YW M KLP+ GCT+A QVLKELQE   A PN F+RI GF NVRQVQCISFIA  P  F
Sbjct:  121 YWTMWKLPVFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPPSF 178

[Close]

BLAST of HO067160 vs. SwissProt
Match: RBS1_SOYBN (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Glycine max GN=RBCS-1 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.587e-16
Identity = 40/58 (68.97%), Postives = 43/58 (74.14%), Query Frame = -3

Query:  176 YWXMXKLPLXGCTEAVQVLKELQEVVKAXPNAFVRIXGFXNVRQVQCISFIAXXPKEF 349
            YW M KLP+ GCT+A QVLKELQE   A PN F+RI GF NVRQVQCISFIA  P  F
Sbjct:  121 YWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPPGF 178

[Close]

BLAST of HO067160 vs. SwissProt
Match: RBS1_PETHY (Ribulose bisphosphate carboxylase small chain SSU8, chloroplastic OS=Petunia hybrida GN=RBCS PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.587e-16
Identity = 40/58 (68.97%), Postives = 44/58 (75.86%), Query Frame = -3

Query:  176 YWXMXKLPLXGCTEAVQVLKELQEVVKAXPNAFVRIXGFXNVRQVQCISFIAXXPKEF 349
            YW M KLP+ GCT+A QVL ELQE  KA PNA++RI GF NVRQVQCISFIA  P  F
Sbjct:  123 YWTMWKLPMFGCTDATQVLGELQEAKKAYPNAWIRIIGFDNVRQVQCISFIAYKPPGF 180

[Close]

BLAST of HO067160 vs. SwissProt
Match: RBS_SINAL (Ribulose bisphosphate carboxylase small chain (Fragment) OS=Sinapis alba GN=RBCS PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.245e-15
Identity = 39/58 (67.24%), Postives = 43/58 (74.14%), Query Frame = -3

Query:  176 YWXMXKLPLXGCTEAVQVLKELQEVVKAXPNAFVRIXGFXNVRQVQCISFIAXXPKEF 349
            YW M KLPL GCT++ QVLKE+QE  K  PNAF+RI GF N RQVQCISFIA  P  F
Sbjct:   22 YWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSF 79

[Close]

BLAST of HO067160 vs. SwissProt
Match: RBS2_PETHY (Ribulose bisphosphate carboxylase small chain SSU11A, chloroplastic OS=Petunia hybrida GN=RBCS PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.245e-15
Identity = 39/55 (70.91%), Postives = 43/55 (78.18%), Query Frame = -3

Query:  185 YWXMXKLPLXGCTEAVQVLKELQEVVKAXPNAFVRIXGFXNVRQVQCISFIAXXP 349
            YW M KLP+ GCT+A QVL ELQE  KA PNA++RI GF NVRQVQCISFIA  P
Sbjct:  123 YWTMWKLPMFGCTDATQVLGELQEAKKAYPNAWIRIIGFDNVRQVQCISFIAYKP 177

[Close]

BLAST of HO067160 vs. SwissProt
Match: RBS1A_ARATH (Ribulose bisphosphate carboxylase small chain 1A, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1A PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.245e-15
Identity = 38/58 (65.52%), Postives = 43/58 (74.14%), Query Frame = -3

Query:  176 YWXMXKLPLXGCTEAVQVLKELQEVVKAXPNAFVRIXGFXNVRQVQCISFIAXXPKEF 349
            YW M KLPL GCT++ QVLKE++E  K  PNAF+RI GF N RQVQCISFIA  P  F
Sbjct:  121 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPNAFIRIIGFDNTRQVQCISFIAYKPPSF 178

[Close]

BLAST of HO067160 vs. SwissProt
Match: RBS_PYRPY (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.123e-15
Identity = 38/58 (65.52%), Postives = 44/58 (75.86%), Query Frame = -3

Query:  176 YWXMXKLPLXGCTEAVQVLKELQEVVKAXPNAFVRIXGFXNVRQVQCISFIAXXPKEF 349
            YW M KLP+ GCT++ QVLKEL+E  KA P +F+RI GF NVRQVQCISFIA  P  F
Sbjct:  126 YWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKPAGF 183

[Close]

BLAST of HO067160 vs. SwissProt
Match: RBS_MALSP (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Malus sp. GN=RBCS PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.123e-15
Identity = 38/58 (65.52%), Postives = 44/58 (75.86%), Query Frame = -3

Query:  176 YWXMXKLPLXGCTEAVQVLKELQEVVKAXPNAFVRIXGFXNVRQVQCISFIAXXPKEF 349
            YW M KLP+ GCT++ QVLKEL+E  KA P +F+RI GF NVRQVQCISFIA  P  F
Sbjct:  126 YWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKPAGF 183

[Close]

BLAST of HO067160 vs. TrEMBL
Match: Q9ZP07_CICAR (Ribulose bisphosphate carboxylase small chain OS=Cicer arietinum PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 5.118e-20
Identity = 50/58 (86.21%), Postives = 50/58 (86.21%), Query Frame = -3

Query:  176 YWXMXKLPLXGCTEAVQVLKELQEVVKAXPNAFVRIXGFXNVRQVQCISFIAXXPKEF 349
            YW M KLPL GCTEAVQVLKELQEVVKA PNAFVRI GF NVRQVQCISFIA  PKEF
Sbjct:  124 YWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQCISFIAHTPKEF 181

[Close]

BLAST of HO067160 vs. TrEMBL
Match: B9T1N0_RICCO (Ribulose bisphosphate carboxylase small chain OS=Ricinus communis GN=RCOM_1158790 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.433e-16
Identity = 41/58 (70.69%), Postives = 46/58 (79.31%), Query Frame = -3

Query:  176 YWXMXKLPLXGCTEAVQVLKELQEVVKAXPNAFVRIXGFXNVRQVQCISFIAXXPKEF 349
            YW M KLP+ GC++AVQVLKEL E +KA PN+FVRI GF NVRQVQCISFIA  P  F
Sbjct:  125 YWTMWKLPMFGCSDAVQVLKELDEAIKAYPNSFVRIIGFDNVRQVQCISFIAYKPPSF 182

[Close]

BLAST of HO067160 vs. TrEMBL
Match: B7FMC2_MEDTR (Ribulose bisphosphate carboxylase small chain OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.474e-15
Identity = 42/58 (72.41%), Postives = 45/58 (77.59%), Query Frame = -3

Query:  176 YWXMXKLPLXGCTEAVQVLKELQEVVKAXPNAFVRIXGFXNVRQVQCISFIAXXPKEF 349
            YW M KLPL G T+A QVLKEL EVV A PNAFVRI GF NVRQVQCISFIA  P+ +
Sbjct:  124 YWTMWKLPLFGATDASQVLKELDEVVVAYPNAFVRIIGFDNVRQVQCISFIAHTPEVY 181

[Close]

BLAST of HO067160 vs. TrEMBL
Match: A9PG69_POPTR (Ribulose bisphosphate carboxylase small chain OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.474e-15
Identity = 40/56 (71.43%), Postives = 43/56 (76.79%), Query Frame = -3

Query:  182 YWXMXKLPLXGCTEAVQVLKELQEVVKAXPNAFVRIXGFXNVRQVQCISFIAXXPK 349
            YW M KLP+ GCTEA QVL EL+E  KA PNAF+RI GF N RQVQCISFIA  PK
Sbjct:  125 YWTMWKLPMFGCTEASQVLLELEEAKKAYPNAFIRIIGFDNTRQVQCISFIAAKPK 180

[Close]

BLAST of HO067160 vs. TrEMBL
Match: A9PFS6_POPTR (Ribulose bisphosphate carboxylase small chain OS=Populus trichocarpa GN=POPTRDRAFT_813777 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.474e-15
Identity = 40/56 (71.43%), Postives = 43/56 (76.79%), Query Frame = -3

Query:  182 YWXMXKLPLXGCTEAVQVLKELQEVVKAXPNAFVRIXGFXNVRQVQCISFIAXXPK 349
            YW M KLP+ GCTEA QVL EL+E  KA PNAF+RI GF N RQVQCISFIA  PK
Sbjct:  125 YWTMWKLPMFGCTEASQVLLELEEAKKAYPNAFIRIIGFDNTRQVQCISFIAAKPK 180

[Close]

BLAST of HO067160 vs. TrEMBL
Match: Q9FUJ5_SOYBN (Ribulose bisphosphate carboxylase small chain OS=Glycine max PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.456e-15
Identity = 40/58 (68.97%), Postives = 43/58 (74.14%), Query Frame = -3

Query:  176 YWXMXKLPLXGCTEAVQVLKELQEVVKAXPNAFVRIXGFXNVRQVQCISFIAXXPKEF 349
            YW M KLP+ GCT+A QVLKELQE   A PN F+RI GF NVRQVQCISFIA  P  F
Sbjct:  121 YWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPPGF 178

[Close]

BLAST of HO067160 vs. TrEMBL
Match: Q39832_SOYBN (Ribulose bisphosphate carboxylase small chain OS=Glycine max PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.456e-15
Identity = 40/58 (68.97%), Postives = 43/58 (74.14%), Query Frame = -3

Query:  176 YWXMXKLPLXGCTEAVQVLKELQEVVKAXPNAFVRIXGFXNVRQVQCISFIAXXPKEF 349
            YW M KLP+ GCT+A QVLKELQE   A PN F+RI GF NVRQVQCISFIA  P  F
Sbjct:  121 YWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPPGF 178

[Close]

BLAST of HO067160 vs. TrEMBL
Match: D6BR54_9ROSI (Ribulose bisphosphate carboxylase small chain OS=Jatropha curcas PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.456e-15
Identity = 39/56 (69.64%), Postives = 43/56 (76.79%), Query Frame = -3

Query:  182 YWXMXKLPLXGCTEAVQVLKELQEVVKAXPNAFVRIXGFXNVRQVQCISFIAXXPK 349
            YW M KLP+ GCT+AVQVL EL E +KA PN FVRI GF + RQVQCISFIA  PK
Sbjct:  124 YWTMWKLPMFGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPK 179

[Close]

BLAST of HO067160 vs. TrEMBL
Match: C6T1Y2_SOYBN (Ribulose bisphosphate carboxylase small chain OS=Glycine max PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.456e-15
Identity = 40/58 (68.97%), Postives = 43/58 (74.14%), Query Frame = -3

Query:  176 YWXMXKLPLXGCTEAVQVLKELQEVVKAXPNAFVRIXGFXNVRQVQCISFIAXXPKEF 349
            YW M KLP+ GCT+A QVLKELQE   A PN F+RI GF NVRQVQCISFIA  P  F
Sbjct:  121 YWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPPGF 178

[Close]

BLAST of HO067160 vs. TrEMBL
Match: C6SVL2_SOYBN (Ribulose bisphosphate carboxylase small chain OS=Glycine max PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.456e-15
Identity = 40/58 (68.97%), Postives = 43/58 (74.14%), Query Frame = -3

Query:  176 YWXMXKLPLXGCTEAVQVLKELQEVVKAXPNAFVRIXGFXNVRQVQCISFIAXXPKEF 349
            YW M KLP+ GCT+A QVLKELQE   A PN F+RI GF NVRQVQCISFIA  P  F
Sbjct:  121 YWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPPGF 178

[Close]

BLAST of HO067160 vs. TAIR peptide
Match: AT1G67090.1 (| Symbols: RBCS1A | ribulose bisphosphate carboxylase small chain 1A | chr1:25048465-25049249 REVERSE LENGTH=180)

HSP 1 Score: 83.5741 bits (205), Expect = 1.241e-16
Identity = 38/58 (65.52%), Postives = 43/58 (74.14%), Query Frame = -3

Query:  176 YWXMXKLPLXGCTEAVQVLKELQEVVKAXPNAFVRIXGFXNVRQVQCISFIAXXPKEF 349
            YW M KLPL GCT++ QVLKE++E  K  PNAF+RI GF N RQVQCISFIA  P  F
Sbjct:  121 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPNAFIRIIGFDNTRQVQCISFIAYKPPSF 178

[Close]

BLAST of HO067160 vs. TAIR peptide
Match: AT5G38410.3 (| Symbols: | Ribulose bisphosphate carboxylase (small chain) family protein | chr5:15377501-15378306 REVERSE LENGTH=186)

HSP 1 Score: 81.2629 bits (199), Expect = 6.159e-16
Identity = 37/58 (63.79%), Postives = 42/58 (72.41%), Query Frame = -3

Query:  176 YWXMXKLPLXGCTEAVQVLKELQEVVKAXPNAFVRIXGFXNVRQVQCISFIAXXPKEF 349
            YW M KLPL GCT++ QVLKE++E  K  P AF+RI GF N RQVQCISFIA  P  F
Sbjct:  126 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSF 183

[Close]

BLAST of HO067160 vs. TAIR peptide
Match: AT5G38410.2 (| Symbols: | Ribulose bisphosphate carboxylase (small chain) family protein | chr5:15377501-15378306 REVERSE LENGTH=174)

HSP 1 Score: 81.2629 bits (199), Expect = 6.159e-16
Identity = 37/58 (63.79%), Postives = 42/58 (72.41%), Query Frame = -3

Query:  176 YWXMXKLPLXGCTEAVQVLKELQEVVKAXPNAFVRIXGFXNVRQVQCISFIAXXPKEF 349
            YW M KLPL GCT++ QVLKE++E  K  P AF+RI GF N RQVQCISFIA  P  F
Sbjct:  114 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSF 171

[Close]

BLAST of HO067160 vs. TAIR peptide
Match: AT5G38410.1 (| Symbols: | Ribulose bisphosphate carboxylase (small chain) family protein | chr5:15377501-15378306 REVERSE LENGTH=181)

HSP 1 Score: 81.2629 bits (199), Expect = 6.159e-16
Identity = 37/58 (63.79%), Postives = 42/58 (72.41%), Query Frame = -3

Query:  176 YWXMXKLPLXGCTEAVQVLKELQEVVKAXPNAFVRIXGFXNVRQVQCISFIAXXPKEF 349
            YW M KLPL GCT++ QVLKE++E  K  P AF+RI GF N RQVQCISFIA  P  F
Sbjct:  121 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSF 178

[Close]

BLAST of HO067160 vs. TAIR peptide
Match: AT5G38420.1 (| Symbols: | Ribulose bisphosphate carboxylase (small chain) family protein | chr5:15381203-15381978 REVERSE LENGTH=181)

HSP 1 Score: 81.2629 bits (199), Expect = 6.159e-16
Identity = 37/58 (63.79%), Postives = 42/58 (72.41%), Query Frame = -3

Query:  176 YWXMXKLPLXGCTEAVQVLKELQEVVKAXPNAFVRIXGFXNVRQVQCISFIAXXPKEF 349
            YW M KLPL GCT++ QVLKE++E  K  P AF+RI GF N RQVQCISFIA  P  F
Sbjct:  121 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSF 178

[Close]

BLAST of HO067160 vs. TAIR peptide
Match: AT5G38430.1 (| Symbols: | Ribulose bisphosphate carboxylase (small chain) family protein | chr5:15384350-15385155 REVERSE LENGTH=181)

HSP 1 Score: 81.2629 bits (199), Expect = 6.159e-16
Identity = 37/58 (63.79%), Postives = 42/58 (72.41%), Query Frame = -3

Query:  176 YWXMXKLPLXGCTEAVQVLKELQEVVKAXPNAFVRIXGFXNVRQVQCISFIAXXPKEF 349
            YW M KLPL GCT++ QVLKE++E  K  P AF+RI GF N RQVQCISFIA  P  F
Sbjct:  121 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSF 178

The following BLAST results are available for this feature:

BLAST of HO067160 vs. SwissProt
BLAST of HO067160 vs. TrEMBL
BLAST of HO067160 vs. TAIR peptide

BLAST of HO067160 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RBS_GLYTA	1.126e-16	70.69	Ribulose bisphosphate carboxylase small chain, chl...	[more]
RBS4_SOYBN	3.275e-16	68.97	Ribulose bisphosphate carboxylase small chain 4, c...	[more]
RBS_GLYTO	4.278e-16	68.97	Ribulose bisphosphate carboxylase small chain, chl...	[more]
RBS1_SOYBN	5.587e-16	68.97	Ribulose bisphosphate carboxylase small chain 1, c...	[more]
RBS1_PETHY	5.587e-16	68.97	Ribulose bisphosphate carboxylase small chain SSU8...	[more]
RBS_SINAL	1.245e-15	67.24	Ribulose bisphosphate carboxylase small chain (Fra...	[more]
RBS2_PETHY	1.245e-15	70.91	Ribulose bisphosphate carboxylase small chain SSU1...	[more]
RBS1A_ARATH	1.245e-15	65.52	Ribulose bisphosphate carboxylase small chain 1A, ...	[more]
RBS_PYRPY	2.123e-15	65.52	Ribulose bisphosphate carboxylase small chain, chl...	[more]
RBS_MALSP	2.123e-15	65.52	Ribulose bisphosphate carboxylase small chain, chl...	[more]

BLAST of HO067160 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q9ZP07_CICAR	5.118e-20	86.21	Ribulose bisphosphate carboxylase small chain OS=C...	[more]
B9T1N0_RICCO	3.433e-16	70.69	Ribulose bisphosphate carboxylase small chain OS=R...	[more]
B7FMC2_MEDTR	6.474e-15	72.41	Ribulose bisphosphate carboxylase small chain OS=M...	[more]
A9PG69_POPTR	6.474e-15	71.43	Ribulose bisphosphate carboxylase small chain OS=P...	[more]
A9PFS6_POPTR	6.474e-15	71.43	Ribulose bisphosphate carboxylase small chain OS=P...	[more]
Q9FUJ5_SOYBN	8.456e-15	68.97	Ribulose bisphosphate carboxylase small chain OS=G...	[more]
Q39832_SOYBN	8.456e-15	68.97	Ribulose bisphosphate carboxylase small chain OS=G...	[more]
D6BR54_9ROSI	8.456e-15	69.64	Ribulose bisphosphate carboxylase small chain OS=J...	[more]
C6T1Y2_SOYBN	8.456e-15	68.97	Ribulose bisphosphate carboxylase small chain OS=G...	[more]
C6SVL2_SOYBN	8.456e-15	68.97	Ribulose bisphosphate carboxylase small chain OS=G...	[more]

BLAST of HO067160 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 6


Match Name	E-value	Identity	Description
AT1G67090.1	1.241e-16	65.52	\| Symbols: RBCS1A \| ribulose bisphosphate carboxyl...	[more]
AT5G38410.3	6.159e-16	63.79	\| Symbols: \| Ribulose bisphosphate carboxylase (s...	[more]
AT5G38410.2	6.159e-16	63.79	\| Symbols: \| Ribulose bisphosphate carboxylase (s...	[more]
AT5G38410.1	6.159e-16	63.79	\| Symbols: \| Ribulose bisphosphate carboxylase (s...	[more]
AT5G38420.1	6.159e-16	63.79	\| Symbols: \| Ribulose bisphosphate carboxylase (s...	[more]
AT5G38430.1	6.159e-16	63.79	\| Symbols: \| Ribulose bisphosphate carboxylase (s...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 10..28 score
IPR000894	Ribulose bisphosphate carboxylase, small chain	PRINTS	PR00152	RUBISCOSMALL	coord: 25..54 score: 2.5e-19coord: 59..85 score: 2.5
IPR000894	Ribulose bisphosphate carboxylase, small chain	GENE3D	3.30.190.10	no description	coord: 29..87 score: 7.9
IPR000894	Ribulose bisphosphate carboxylase, small chain	PFAM	PF00101	RuBisCO_small	coord: 29..85 score: 5
IPR000894	Ribulose bisphosphate carboxylase, small chain	SMART	SM00961	no description	coord: 5..85 score: 0.
IPR000894	Ribulose bisphosphate carboxylase, small chain	SUPERFAMILY	55239	RuBisCO, small subunit	coord: 27..88 score: 5.3

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>HO067160 ID=HO067160; Name=HO067160; organism=Cicer arietinum; type=EST; length=735bp
GGANAAAAGGACCNTTTCATTTATTAACTCTTATCCNTCCNTTTGCATTT
GAAGTCCGAAAGTAAAAACCGAAAAAACAAAGGAAGACNTTCCTTTGAAG
AAGAAAAGGAGATTACNAGCATAACAAATGGGAGAAAATAAATGATTCTT
CCNAGAGAGTTAATACTCNAACTTAGAACTCTTTAGGNGNGNGNGCAATG
AAACTGATGCACTGCACTTGGCGAACATTGNCGAATCCNATGATGCGGAC
GAAAGCATTAGGGNAAGCCTTGACAACTTCCTGAAGTTCCTTCAACACTT
GAACAGCCTCNGTGCAACCNAACAATGGAAGCTTCCNCATTGNCCAGTAC
GCGGGGTTGATGGAATTGACTAGGGCCCNAAGCTTGNGGGCTGNAATATT
CTTAAATTTAAGAAAACAACTTTGTCCNCCCNCNTATTTCTAACAAATCT
TCNGAAGTGNAATTTCGAACGGGTTAAGAATTGTATTTTTTCTTCAAAGT
ACACTTTCGAACAGATAAAAGTGTTTTGCATAATATGTAAATCAAAAGTG
ATTTTGAGGTGTGAGAAAAGTTCTTCCTAATGTTCTAACATATGATGATC
ATTTGTATACCCCCNCATTTAATCTCTAACCCCCNAGATCTAGTCAAAAG
TTAATTTTACNTTTGNCCCNATTAANTANTTTATTTGGTTAAATTTGAAA
ATTCNCTATCCCTCTTAAGTATTATCGAATAACAA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Biological Process**
Term	Definition
GO:0015977	carbon fixation

Vocabulary: **Molecular Function**
Term	Definition
GO:0016984	ribulose-bisphosphate carboxylase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR024681	RuBisCO_ssu

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