CK148738

EST Overview
NameCK148738
Unique NameCK148738
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length460
Libraries
Library NameType
LIBEST_014674 Suppressive subtractive hybridization librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Homology
BLAST of CK148738 vs. SwissProt
Match: PUB17_ARATH (U-box domain-containing protein 17 OS=Arabidopsis thaliana GN=PUB17 PE=1 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 1.575e-10
Identity = 29/49 (59.18%), Postives = 34/49 (69.39%), Query Frame = 2
Query:  170 TLEAFLAPVDLSDVSLVQTLMAGGERACVLFFKASFFFQRKNSRTLIRK 316
            +LEAFLAPVDLS V+LVQTL +        F    F FQRKN+R+LIRK
Sbjct:   17 SLEAFLAPVDLSGVALVQTLASISSEVVSCFTSVRFSFQRKNARSLIRK 65          

HSP 2 Score: 25.409 bits (54), Expect = 1.575e-10
Identity = 12/13 (92.31%), Postives = 12/13 (92.31%), Query Frame = 1
Query:  124 MASGAIFSSLRRR 162
            MAS AIFSSLRRR
Sbjct:    1 MASAAIFSSLRRR 13          

HSP 3 Score: 24.2534 bits (51), Expect = 1.575e-10
Identity = 9/20 (45.00%), Postives = 15/20 (75.00%), Query Frame = 1
Query:  382 MLCLKELYFVVVWWQDIIDY 441
            +LCLKELY ++   + ++DY
Sbjct:  104 LLCLKELYLLLYRSKILVDY 123          
BLAST of CK148738 vs. TrEMBL
Match: B7FM68_MEDTR (Putative uncharacterized protein (Fragment) OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 2.600e-9
Identity = 34/49 (69.39%), Postives = 38/49 (77.55%), Query Frame = 2
Query:  170 TLEAFLAPVDLSDVSLVQTLMAGGERACVLFFKASFFFQRKNSRTLIRK 316
            TLEAFLAPVDLSDV+LVQTL+         F K SFFFQRKN+R+LIRK
Sbjct:   17 TLEAFLAPVDLSDVALVQTLVTVVNELVCCFSKRSFFFQRKNTRSLIRK 65          
BLAST of CK148738 vs. TrEMBL
Match: B9S8E7_RICCO (Ubiquitin-protein ligase, putative OS=Ricinus communis GN=RCOM_1251990 PE=4 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 8.363e-8
Identity = 31/49 (63.27%), Postives = 37/49 (75.51%), Query Frame = 2
Query:  170 TLEAFLAPVDLSDVSLVQTLMAGGERACVLFFKASFFFQRKNSRTLIRK 316
            +LEAFLAPVDL+DV+LVQTL++        F   S FFQRKNSR+LIRK
Sbjct:   17 SLEAFLAPVDLTDVALVQTLVSVSTELVACFSGKSMFFQRKNSRSLIRK 65          
BLAST of CK148738 vs. TrEMBL
Match: D7KDS9_ARALY (Plant U-box17 OS=Arabidopsis lyrata subsp. lyrata GN=PUB17 PE=4 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 9.446e-8
Identity = 29/49 (59.18%), Postives = 34/49 (69.39%), Query Frame = 2
Query:  170 TLEAFLAPVDLSDVSLVQTLMAGGERACVLFFKASFFFQRKNSRTLIRK 316
            +LEAFLAPVDLS V+LVQTL +        F    F FQRKN+R+LIRK
Sbjct:   17 SLEAFLAPVDLSGVALVQTLASISTEVVSCFTSVRFSFQRKNARSLIRK 65          

HSP 2 Score: 25.409 bits (54), Expect = 9.446e-8
Identity = 12/13 (92.31%), Postives = 12/13 (92.31%), Query Frame = 1
Query:  124 MASGAIFSSLRRR 162
            MAS AIFSSLRRR
Sbjct:    1 MASAAIFSSLRRR 13          
BLAST of CK148738 vs. TrEMBL
Match: B9I1H0_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_235193 PE=4 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.426e-7
Identity = 31/49 (63.27%), Postives = 37/49 (75.51%), Query Frame = 2
Query:  170 TLEAFLAPVDLSDVSLVQTLMAGGERACVLFFKASFFFQRKNSRTLIRK 316
            +LEAFLAPVDL+DV+LVQTL++        F   S FFQRKNSR+LIRK
Sbjct:   17 SLEAFLAPVDLTDVALVQTLVSVSTELVSCFSGKSLFFQRKNSRSLIRK 65          
BLAST of CK148738 vs. TAIR peptide
Match: AT1G29340.1 (| Symbols: PUB17, ATPUB17 | plant U-box 17 | chr1:10264412-10266601 FORWARD LENGTH=729)

HSP 1 Score: 54.6842 bits (130), Expect = 1.811e-11
Identity = 29/49 (59.18%), Postives = 34/49 (69.39%), Query Frame = 2
Query:  170 TLEAFLAPVDLSDVSLVQTLMAGGERACVLFFKASFFFQRKNSRTLIRK 316
            +LEAFLAPVDLS V+LVQTL +        F    F FQRKN+R+LIRK
Sbjct:   17 SLEAFLAPVDLSGVALVQTLASISSEVVSCFTSVRFSFQRKNARSLIRK 65          

HSP 2 Score: 25.409 bits (54), Expect = 1.811e-11
Identity = 12/13 (92.31%), Postives = 12/13 (92.31%), Query Frame = 1
Query:  124 MASGAIFSSLRRR 162
            MAS AIFSSLRRR
Sbjct:    1 MASAAIFSSLRRR 13          

HSP 3 Score: 24.2534 bits (51), Expect = 1.811e-11
Identity = 9/20 (45.00%), Postives = 15/20 (75.00%), Query Frame = 1
Query:  382 MLCLKELYFVVVWWQDIIDY 441
            +LCLKELY ++   + ++DY
Sbjct:  104 LLCLKELYLLLYRSKILVDY 123          
The following BLAST results are available for this feature:
BLAST of CK148738 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
PUB17_ARATH1.575e-1059.18U-box domain-containing protein 17 OS=Arabidopsis ... [more]
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BLAST of CK148738 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 4
Match NameE-valueIdentityDescription
B7FM68_MEDTR2.600e-969.39Putative uncharacterized protein (Fragment) OS=Med... [more]
B9S8E7_RICCO8.363e-863.27Ubiquitin-protein ligase, putative OS=Ricinus comm... [more]
D7KDS9_ARALY9.446e-859.18Plant U-box17 OS=Arabidopsis lyrata subsp. lyrata ... [more]
B9I1H0_POPTR1.426e-763.27Predicted protein (Fragment) OS=Populus trichocarp... [more]
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BLAST of CK148738 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G29340.11.811e-1159.18| Symbols: PUB17, ATPUB17 | plant U-box 17 | chr1:... [more]
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Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CK148738 ID=CK148738; Name=CK148738; organism=Cicer arietinum; type=EST; length=460bp
AACTGAGGGTCAATCTGCTGAGCTTCGGCGGATCATAGGCTCATCACCTG
TTGTACTTGTGTCTATAGTTTTCATAATGGTCGGGTTTATAAACCCTAGA
AAATTCATTCTCATAATATTAAAATGGCTTCAGGGGCAATTTTCTCTTCG
CTGCGGCGGCGAAATCGCCACGTTGGAAGCTTTTCTTGCTCCCGTTGATT
TAAGCGATGTCTCTTTGGTTCAGACCCTTATGGCAGGAGGCGAACGAGCT
TGTGTGTTGTTTTTCAAAGCGTCCTTTTTCTTTCAGAGGAAAAATTCACG
GACTTTGATCAGAAAAGTTGAAGTTTTCAGTATCTTTTGAGTATTTGAAT
GATTCAGGTTTTCCCTATCCACCTACAGCTTATGCTTTGTCTTAAGGAGC
TTTATTTTGTTGTTGTATGGTGGCAAGATATAATTGATTATCGCCCGCAT
GCGAGGTAAG
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