EH058925
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EH058925 vs. TrEMBL
Match: C6ZJY6_SOYBN (Serine hydroxymethyltransferase OS=Glycine max PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.789e-17 Identity = 52/69 (75.36%), Postives = 58/69 (84.06%), Query Frame = -1 Query: 2 KDFWTRSAEFPFNRAVVLNLR*SKKEYGKLLKDFNKGLVNNKAIEDLKADVEKFSASFDMPGFLVSELK 208 KDF + EF +RAV L L +KE+GKLLKDFNKGLVNNKAIEDLKADVEKFSA+FDMPGFLVSE+K Sbjct: 411 KDF-EQIGEF-LHRAVTLTLE-IQKEHGKLLKDFNKGLVNNKAIEDLKADVEKFSATFDMPGFLVSEMK 476
BLAST of EH058925 vs. TrEMBL
Match: C6ZJY7_SOYBN (Serine hydroxymethyltransferase OS=Glycine max PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.329e-16 Identity = 56/82 (68.29%), Postives = 61/82 (74.39%), Query Frame = -1 Query: 2 GPQVMNFRGFD*GKDFWTRSAEFPFNRAVVLNLR*SKKEYGKLLKDFNKGLVNNKAIEDLKADVEKFSASFDMPGFLVSELK 247 G M RG KDF + EF +RAV L L +KE+GKLLKDFNKGLVNNKAIEDLKADVEKFSA FDMPGFLVSE+K Sbjct: 416 GAPAMTSRGLV-EKDF-EQIGEF-LHRAVTLTLE-IQKEHGKLLKDFNKGLVNNKAIEDLKADVEKFSALFDMPGFLVSEMK 493
BLAST of EH058925 vs. TrEMBL
Match: Q58A18_CUCME (Putative uncharacterized protein 6F11 (Fragment) OS=Cucumis melo GN=6F11 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.960e-16 Identity = 54/82 (65.85%), Postives = 61/82 (74.39%), Query Frame = -1 Query: 2 GPQVMNFRGFD*GKDFWTRSAEFPFNRAVVLNLR*SKKEYGKLLKDFNKGLVNNKAIEDLKADVEKFSASFDMPGFLVSELK 247 G M RG KDF + AEF +RAV + L +KEYGKLLKDFNKGLVNNK IE+LKADVEKFS SFDMPGFL+SE+K Sbjct: 243 GAPAMTSRGLV-EKDF-EQIAEF-LHRAVTITLN-IQKEYGKLLKDFNKGLVNNKEIEELKADVEKFSGSFDMPGFLMSEMK 320
BLAST of EH058925 vs. TrEMBL
Match: A9PL04_POPTM (Serine hydroxymethyltransferase OS=Populus tremuloides GN=SHMT1 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.274e-15 Identity = 53/82 (64.63%), Postives = 59/82 (71.95%), Query Frame = -1 Query: 2 GPQVMNFRGFD*GKDFWTRSAEFPFNRAVVLNLR*SKKEYGKLLKDFNKGLVNNKAIEDLKADVEKFSASFDMPGFLVSELK 247 G M RG KDF + EF +RAV + L +KEYGKLLKDFNKGLVNNK IE LKADVEKFS SFDMPGFL+SE+K Sbjct: 391 GTPAMTSRGLV-EKDF-EQIGEF-LHRAVTITLS-IQKEYGKLLKDFNKGLVNNKDIEALKADVEKFSGSFDMPGFLMSEMK 468
BLAST of EH058925 vs. TrEMBL
Match: D7SNS3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_29.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00021046001 PE=4 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.582e-15 Identity = 52/82 (63.41%), Postives = 61/82 (74.39%), Query Frame = -1 Query: 2 GPQVMNFRGFD*GKDFWTRSAEFPFNRAVVLNLR*SKKEYGKLLKDFNKGLVNNKAIEDLKADVEKFSASFDMPGFLVSELK 247 G M RG KDF + AEF +RAV + L+ +KE+GKLLKDFNKGLVNNK IE+LK DVEKFSASF+MPGF VSE+K Sbjct: 176 GAPAMTSRGLV-EKDF-EQIAEF-LHRAVTITLK-IQKEHGKLLKDFNKGLVNNKDIEELKVDVEKFSASFEMPGFSVSEMK 253
BLAST of EH058925 vs. TrEMBL
Match: B9S9Y7_RICCO (Serine hydroxymethyltransferase OS=Ricinus communis GN=RCOM_0523510 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.522e-15 Identity = 53/82 (64.63%), Postives = 60/82 (73.17%), Query Frame = -1 Query: 2 GPQVMNFRGFD*GKDFWTRSAEFPFNRAVVLNLR*SKKEYGKLLKDFNKGLVNNKAIEDLKADVEKFSASFDMPGFLVSELK 247 G M RG KDF + EF +RAV L L +KE+GKLLKDFNKGLVNNK IE LKADVEKFS+SFDMPGFL+SE+K Sbjct: 391 GTPAMTSRGLV-EKDF-EKIGEF-LHRAVSLTLS-IQKEHGKLLKDFNKGLVNNKDIEALKADVEKFSSSFDMPGFLMSEMK 468
BLAST of EH058925 vs. TrEMBL
Match: A9P855_POPTR (Serine hydroxymethyltransferase OS=Populus trichocarpa GN=SHMT1 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.121e-14 Identity = 52/82 (63.41%), Postives = 58/82 (70.73%), Query Frame = -1 Query: 2 GPQVMNFRGFD*GKDFWTRSAEFPFNRAVVLNLR*SKKEYGKLLKDFNKGLVNNKAIEDLKADVEKFSASFDMPGFLVSELK 247 G M RG KDF + EF +RAV + L +KEYGKLLKDFNKGLVNNK IE LKADVEKFS SFDMPGF +SE+K Sbjct: 391 GTPAMTSRGLV-EKDF-EQIGEF-LHRAVTITLS-IQKEYGKLLKDFNKGLVNNKDIEALKADVEKFSGSFDMPGFQMSEMK 468
BLAST of EH058925 vs. TrEMBL
Match: Q9FPJ3_ARATH (Serine hydroxymethyltransferase OS=Arabidopsis thaliana GN=AT4g13930/dl3005c PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 8.061e-14 Identity = 50/82 (60.98%), Postives = 59/82 (71.95%), Query Frame = -1 Query: 2 GPQVMNFRGFD*GKDFWTRSAEFPFNRAVVLNLR*SKKEYGKLLKDFNKGLVNNKAIEDLKADVEKFSASFDMPGFLVSELK 247 G M RG KDF + EF +RAV L L +K YGKLLKDFNKGLVNNK ++ LKADVEKFSAS++MPGFL+SE+K Sbjct: 391 GAPAMTSRGLV-EKDF-EQIGEF-LSRAVTLTLD-IQKTYGKLLKDFNKGLVNNKDLDQLKADVEKFSASYEMPGFLMSEMK 468
BLAST of EH058925 vs. TrEMBL
Match: Q8LBY1_ARATH (Serine hydroxymethyltransferase OS=Arabidopsis thaliana PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 8.061e-14 Identity = 50/82 (60.98%), Postives = 59/82 (71.95%), Query Frame = -1 Query: 2 GPQVMNFRGFD*GKDFWTRSAEFPFNRAVVLNLR*SKKEYGKLLKDFNKGLVNNKAIEDLKADVEKFSASFDMPGFLVSELK 247 G M RG KDF + EF +RAV L L +K YGKLLKDFNKGLVNNK ++ LKADVEKFSAS++MPGFL+SE+K Sbjct: 391 GAPAMTSRGLV-EKDF-EQIGEF-LSRAVTLTLD-IQKTYGKLLKDFNKGLVNNKDLDQLKADVEKFSASYEMPGFLMSEMK 468
BLAST of EH058925 vs. TrEMBL
Match: O23254_ARATH (Serine hydroxymethyltransferase OS=Arabidopsis thaliana GN=dl3005c PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 8.061e-14 Identity = 50/82 (60.98%), Postives = 59/82 (71.95%), Query Frame = -1 Query: 2 GPQVMNFRGFD*GKDFWTRSAEFPFNRAVVLNLR*SKKEYGKLLKDFNKGLVNNKAIEDLKADVEKFSASFDMPGFLVSELK 247 G M RG KDF + EF +RAV L L +K YGKLLKDFNKGLVNNK ++ LKADVEKFSAS++MPGFL+SE+K Sbjct: 391 GAPAMTSRGLV-EKDF-EQIGEF-LSRAVTLTLD-IQKTYGKLLKDFNKGLVNNKDLDQLKADVEKFSASYEMPGFLMSEMK 468
BLAST of EH058925 vs. TAIR peptide
Match: AT4G13930.1 (| Symbols: SHM4 | serine hydroxymethyltransferase 4 | chr4:8048013-8050021 REVERSE LENGTH=471) HSP 1 Score: 82.4185 bits (202), Expect = 4.801e-16 Identity = 50/82 (60.98%), Postives = 59/82 (71.95%), Query Frame = -1 Query: 2 GPQVMNFRGFD*GKDFWTRSAEFPFNRAVVLNLR*SKKEYGKLLKDFNKGLVNNKAIEDLKADVEKFSASFDMPGFLVSELK 247 G M RG KDF + EF +RAV L L +K YGKLLKDFNKGLVNNK ++ LKADVEKFSAS++MPGFL+SE+K Sbjct: 391 GAPAMTSRGLV-EKDF-EQIGEF-LSRAVTLTLD-IQKTYGKLLKDFNKGLVNNKDLDQLKADVEKFSASYEMPGFLMSEMK 468
BLAST of EH058925 vs. TAIR peptide
Match: AT4G13890.1 (| Symbols: SHM5, EDA36, EDA37 | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr4:8032146-8033718 REVERSE LENGTH=470) HSP 1 Score: 73.559 bits (179), Expect = 2.230e-13 Identity = 42/80 (52.50%), Postives = 56/80 (70.00%), Query Frame = -1 Query: 8 GPQVMNFRGFD*GKDFWTRSAEFPFNRAVVLNLR*SKKEYGKLLKDFNKGLVNNKAIEDLKADVEKFSASFDMPGFLVSE 247 G M RG KDF + EF +RAV + L +++YGK++KDFNKGLVNNK I+++KADVE+F+ FDMPGF +SE Sbjct: 391 GTPAMTSRGLV-EKDF-EKIGEF-LHRAVTITLD-IQEQYGKVMKDFNKGLVNNKEIDEIKADVEEFTYDFDMPGFFISE 466 The following BLAST results are available for this feature:
BLAST of EH058925 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of EH058925 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EH058925 ID=EH058925; Name=EH058925; organism=Cicer arietinum; type=EST; length=1072bpback to top |