EH058925

EST Overview
NameEH058925
Unique NameEH058925
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length1072
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of EH058925 vs. TrEMBL
Match: C6ZJY6_SOYBN (Serine hydroxymethyltransferase OS=Glycine max PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.789e-17
Identity = 52/69 (75.36%), Postives = 58/69 (84.06%), Query Frame = -1
Query:    2 KDFWTRSAEFPFNRAVVLNLR*SKKEYGKLLKDFNKGLVNNKAIEDLKADVEKFSASFDMPGFLVSELK 208
            KDF  +  EF  +RAV L L   +KE+GKLLKDFNKGLVNNKAIEDLKADVEKFSA+FDMPGFLVSE+K
Sbjct:  411 KDF-EQIGEF-LHRAVTLTLE-IQKEHGKLLKDFNKGLVNNKAIEDLKADVEKFSATFDMPGFLVSEMK 476          
BLAST of EH058925 vs. TrEMBL
Match: C6ZJY7_SOYBN (Serine hydroxymethyltransferase OS=Glycine max PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.329e-16
Identity = 56/82 (68.29%), Postives = 61/82 (74.39%), Query Frame = -1
Query:    2 GPQVMNFRGFD*GKDFWTRSAEFPFNRAVVLNLR*SKKEYGKLLKDFNKGLVNNKAIEDLKADVEKFSASFDMPGFLVSELK 247
            G   M  RG    KDF  +  EF  +RAV L L   +KE+GKLLKDFNKGLVNNKAIEDLKADVEKFSA FDMPGFLVSE+K
Sbjct:  416 GAPAMTSRGLV-EKDF-EQIGEF-LHRAVTLTLE-IQKEHGKLLKDFNKGLVNNKAIEDLKADVEKFSALFDMPGFLVSEMK 493          
BLAST of EH058925 vs. TrEMBL
Match: Q58A18_CUCME (Putative uncharacterized protein 6F11 (Fragment) OS=Cucumis melo GN=6F11 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.960e-16
Identity = 54/82 (65.85%), Postives = 61/82 (74.39%), Query Frame = -1
Query:    2 GPQVMNFRGFD*GKDFWTRSAEFPFNRAVVLNLR*SKKEYGKLLKDFNKGLVNNKAIEDLKADVEKFSASFDMPGFLVSELK 247
            G   M  RG    KDF  + AEF  +RAV + L   +KEYGKLLKDFNKGLVNNK IE+LKADVEKFS SFDMPGFL+SE+K
Sbjct:  243 GAPAMTSRGLV-EKDF-EQIAEF-LHRAVTITLN-IQKEYGKLLKDFNKGLVNNKEIEELKADVEKFSGSFDMPGFLMSEMK 320          
BLAST of EH058925 vs. TrEMBL
Match: A9PL04_POPTM (Serine hydroxymethyltransferase OS=Populus tremuloides GN=SHMT1 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.274e-15
Identity = 53/82 (64.63%), Postives = 59/82 (71.95%), Query Frame = -1
Query:    2 GPQVMNFRGFD*GKDFWTRSAEFPFNRAVVLNLR*SKKEYGKLLKDFNKGLVNNKAIEDLKADVEKFSASFDMPGFLVSELK 247
            G   M  RG    KDF  +  EF  +RAV + L   +KEYGKLLKDFNKGLVNNK IE LKADVEKFS SFDMPGFL+SE+K
Sbjct:  391 GTPAMTSRGLV-EKDF-EQIGEF-LHRAVTITLS-IQKEYGKLLKDFNKGLVNNKDIEALKADVEKFSGSFDMPGFLMSEMK 468          
BLAST of EH058925 vs. TrEMBL
Match: D7SNS3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_29.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00021046001 PE=4 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.582e-15
Identity = 52/82 (63.41%), Postives = 61/82 (74.39%), Query Frame = -1
Query:    2 GPQVMNFRGFD*GKDFWTRSAEFPFNRAVVLNLR*SKKEYGKLLKDFNKGLVNNKAIEDLKADVEKFSASFDMPGFLVSELK 247
            G   M  RG    KDF  + AEF  +RAV + L+  +KE+GKLLKDFNKGLVNNK IE+LK DVEKFSASF+MPGF VSE+K
Sbjct:  176 GAPAMTSRGLV-EKDF-EQIAEF-LHRAVTITLK-IQKEHGKLLKDFNKGLVNNKDIEELKVDVEKFSASFEMPGFSVSEMK 253          
BLAST of EH058925 vs. TrEMBL
Match: B9S9Y7_RICCO (Serine hydroxymethyltransferase OS=Ricinus communis GN=RCOM_0523510 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.522e-15
Identity = 53/82 (64.63%), Postives = 60/82 (73.17%), Query Frame = -1
Query:    2 GPQVMNFRGFD*GKDFWTRSAEFPFNRAVVLNLR*SKKEYGKLLKDFNKGLVNNKAIEDLKADVEKFSASFDMPGFLVSELK 247
            G   M  RG    KDF  +  EF  +RAV L L   +KE+GKLLKDFNKGLVNNK IE LKADVEKFS+SFDMPGFL+SE+K
Sbjct:  391 GTPAMTSRGLV-EKDF-EKIGEF-LHRAVSLTLS-IQKEHGKLLKDFNKGLVNNKDIEALKADVEKFSSSFDMPGFLMSEMK 468          
BLAST of EH058925 vs. TrEMBL
Match: A9P855_POPTR (Serine hydroxymethyltransferase OS=Populus trichocarpa GN=SHMT1 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.121e-14
Identity = 52/82 (63.41%), Postives = 58/82 (70.73%), Query Frame = -1
Query:    2 GPQVMNFRGFD*GKDFWTRSAEFPFNRAVVLNLR*SKKEYGKLLKDFNKGLVNNKAIEDLKADVEKFSASFDMPGFLVSELK 247
            G   M  RG    KDF  +  EF  +RAV + L   +KEYGKLLKDFNKGLVNNK IE LKADVEKFS SFDMPGF +SE+K
Sbjct:  391 GTPAMTSRGLV-EKDF-EQIGEF-LHRAVTITLS-IQKEYGKLLKDFNKGLVNNKDIEALKADVEKFSGSFDMPGFQMSEMK 468          
BLAST of EH058925 vs. TrEMBL
Match: Q9FPJ3_ARATH (Serine hydroxymethyltransferase OS=Arabidopsis thaliana GN=AT4g13930/dl3005c PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 8.061e-14
Identity = 50/82 (60.98%), Postives = 59/82 (71.95%), Query Frame = -1
Query:    2 GPQVMNFRGFD*GKDFWTRSAEFPFNRAVVLNLR*SKKEYGKLLKDFNKGLVNNKAIEDLKADVEKFSASFDMPGFLVSELK 247
            G   M  RG    KDF  +  EF  +RAV L L   +K YGKLLKDFNKGLVNNK ++ LKADVEKFSAS++MPGFL+SE+K
Sbjct:  391 GAPAMTSRGLV-EKDF-EQIGEF-LSRAVTLTLD-IQKTYGKLLKDFNKGLVNNKDLDQLKADVEKFSASYEMPGFLMSEMK 468          
BLAST of EH058925 vs. TrEMBL
Match: Q8LBY1_ARATH (Serine hydroxymethyltransferase OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 8.061e-14
Identity = 50/82 (60.98%), Postives = 59/82 (71.95%), Query Frame = -1
Query:    2 GPQVMNFRGFD*GKDFWTRSAEFPFNRAVVLNLR*SKKEYGKLLKDFNKGLVNNKAIEDLKADVEKFSASFDMPGFLVSELK 247
            G   M  RG    KDF  +  EF  +RAV L L   +K YGKLLKDFNKGLVNNK ++ LKADVEKFSAS++MPGFL+SE+K
Sbjct:  391 GAPAMTSRGLV-EKDF-EQIGEF-LSRAVTLTLD-IQKTYGKLLKDFNKGLVNNKDLDQLKADVEKFSASYEMPGFLMSEMK 468          
BLAST of EH058925 vs. TrEMBL
Match: O23254_ARATH (Serine hydroxymethyltransferase OS=Arabidopsis thaliana GN=dl3005c PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 8.061e-14
Identity = 50/82 (60.98%), Postives = 59/82 (71.95%), Query Frame = -1
Query:    2 GPQVMNFRGFD*GKDFWTRSAEFPFNRAVVLNLR*SKKEYGKLLKDFNKGLVNNKAIEDLKADVEKFSASFDMPGFLVSELK 247
            G   M  RG    KDF  +  EF  +RAV L L   +K YGKLLKDFNKGLVNNK ++ LKADVEKFSAS++MPGFL+SE+K
Sbjct:  391 GAPAMTSRGLV-EKDF-EQIGEF-LSRAVTLTLD-IQKTYGKLLKDFNKGLVNNKDLDQLKADVEKFSASYEMPGFLMSEMK 468          
BLAST of EH058925 vs. TAIR peptide
Match: AT4G13930.1 (| Symbols: SHM4 | serine hydroxymethyltransferase 4 | chr4:8048013-8050021 REVERSE LENGTH=471)

HSP 1 Score: 82.4185 bits (202), Expect = 4.801e-16
Identity = 50/82 (60.98%), Postives = 59/82 (71.95%), Query Frame = -1
Query:    2 GPQVMNFRGFD*GKDFWTRSAEFPFNRAVVLNLR*SKKEYGKLLKDFNKGLVNNKAIEDLKADVEKFSASFDMPGFLVSELK 247
            G   M  RG    KDF  +  EF  +RAV L L   +K YGKLLKDFNKGLVNNK ++ LKADVEKFSAS++MPGFL+SE+K
Sbjct:  391 GAPAMTSRGLV-EKDF-EQIGEF-LSRAVTLTLD-IQKTYGKLLKDFNKGLVNNKDLDQLKADVEKFSASYEMPGFLMSEMK 468          
BLAST of EH058925 vs. TAIR peptide
Match: AT4G13890.1 (| Symbols: SHM5, EDA36, EDA37 | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr4:8032146-8033718 REVERSE LENGTH=470)

HSP 1 Score: 73.559 bits (179), Expect = 2.230e-13
Identity = 42/80 (52.50%), Postives = 56/80 (70.00%), Query Frame = -1
Query:    8 GPQVMNFRGFD*GKDFWTRSAEFPFNRAVVLNLR*SKKEYGKLLKDFNKGLVNNKAIEDLKADVEKFSASFDMPGFLVSE 247
            G   M  RG    KDF  +  EF  +RAV + L   +++YGK++KDFNKGLVNNK I+++KADVE+F+  FDMPGF +SE
Sbjct:  391 GTPAMTSRGLV-EKDF-EKIGEF-LHRAVTITLD-IQEQYGKVMKDFNKGLVNNKEIDEIKADVEEFTYDFDMPGFFISE 466          
The following BLAST results are available for this feature:
BLAST of EH058925 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6ZJY6_SOYBN7.789e-1775.36Serine hydroxymethyltransferase OS=Glycine max PE=... [more]
C6ZJY7_SOYBN1.329e-1668.29Serine hydroxymethyltransferase OS=Glycine max PE=... [more]
Q58A18_CUCME2.960e-1665.85Putative uncharacterized protein 6F11 (Fragment) O... [more]
A9PL04_POPTM4.274e-1564.63Serine hydroxymethyltransferase OS=Populus tremulo... [more]
D7SNS3_VITVI5.582e-1563.41Whole genome shotgun sequence of line PN40024, sca... [more]
B9S9Y7_RICCO9.522e-1564.63Serine hydroxymethyltransferase OS=Ricinus communi... [more]
A9P855_POPTR2.121e-1463.41Serine hydroxymethyltransferase OS=Populus trichoc... [more]
Q9FPJ3_ARATH8.061e-1460.98Serine hydroxymethyltransferase OS=Arabidopsis tha... [more]
Q8LBY1_ARATH8.061e-1460.98Serine hydroxymethyltransferase OS=Arabidopsis tha... [more]
O23254_ARATH8.061e-1460.98Serine hydroxymethyltransferase OS=Arabidopsis tha... [more]
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BLAST of EH058925 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT4G13930.14.801e-1660.98| Symbols: SHM4 | serine hydroxymethyltransferase ... [more]
AT4G13890.12.230e-1352.50| Symbols: SHM5, EDA36, EDA37 | Pyridoxal phosphat... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 24..36
score
NoneNo IPR availableSEGsegsegcoord: 33..44
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>EH058925 ID=EH058925; Name=EH058925; organism=Cicer arietinum; type=EST; length=1072bp
ACTTCAGCTCAGATACTAGGAATCCAGGCATGTCGAATGAGGCCGAAAAC
TTCTCAACATCAGCCTTGAGGTCTTCTATAGCTTTGTTGTTCACCAATCC
CTTGTTGAAATCCTTCAAAAGTTTTCCATATTCCTTTTTGGATTATCTTA
AATTGAGAACCACTGCGCGGTTGAAAGGAAACTCTGCGGATCTGGTCCAA
AAGTCCTTTCCTCAATCAAACCCCCTAAAATTCATAACTTGGGGCCCACA
ATCCTTACTCCTTCCCAGGAGCCCAGGCACTGGTATCACCCAAAAACCAG
CATTCTTGTTCCCCCGTTGATGTTTCCCTAGATTTCCCCAGAGTTTTTTC
CACCCTTTATTTGGGCCGGGTTCAACACCCAAGGAAAGGGGGCGAAGAAT
CTCCCACCAACAACCCCGCATGGAATTTTTTCAAGTTTCCTCTCCCAGCT
TGACCCCAGCGGTTGTGATACCCCTTTGTCTTGGAATCACAACGTTAATT
TTTCCCCTGTTGGCAACCTTTGCCTTTTGTGGGCCTTTAAACTTTTGTCG
TTGGGAGATAATTGGCCCTTTGGAAAATACCCCGCCGGCCGTACGTTGGG
GCCTCTGGTGTTTCCACAAGGGCCCACCCAAGTCGCAAATGTGGGCCCTC
CCACCCTCTCTCTTTGGCTGTGGGTTTTGTTGGAATGGACTCCCTCCCGC
TTGGAAAACGCGGGGACGGGCGCACACACACCCGCGCGCCCCAGTTTGTG
ATTTTGGTGTCTTCCCACAATTTCTTAAAACACGGGCTATTACTCCCGGC
GCTAGACACACCACTCTTTGGGGCGGGGGGCTCAAGGTCCCCCTTTCCGG
GGTGAAAAATTATTTACCCGGCCCTCTTGTGGCCCCCTTAAAACCACCTC
GTAGGCGTTGTTGTTTGTGACCACTTCCAGTGACCAACGCCCCAGGCGGA
GGGTCCAAACCAATAATAAGTACCCGGCGCATGGCGCGAAATACAATGTG
CCCCATCCCAACATGGATAAGAGTATAATTGTAGTAAACCACACGTGTTA
CGTGATGGAACTGTCCATAAGC
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