FE669974

EST Overview
NameFE669974
Unique NameFE669974
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length306
Libraries
Library NameType
LIBEST_022821 Chickpea leave librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Homology
BLAST of FE669974 vs. SwissProt
Match: NMCP_ARATH (Putative nuclear matrix constituent protein 1-like protein OS=Arabidopsis thaliana GN=At5g65770 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.605e-15
Identity = 40/83 (48.19%), Postives = 55/83 (66.27%), Query Frame = -1
Query:   58 RQIIFFKSDCDEKDKEMNFERQSLSERQKVLQQEQERLLQSKSLLNQREDHLFSRSQELNRLQXXXXXXXXXXXXDNEALHDK 306
            R++  FKS+C+ K+ EM  ERQ+L+ER+K LQQE ERLL ++  LNQREDH+F+RSQEL  L+            + +A  DK
Sbjct:  219 RRLASFKSECETKENEMVIERQTLNERRKSLQQEHERLLDAQVSLNQREDHIFARSQELAELEKGLDTAKTTFEEERKAFEDK 301          
BLAST of FE669974 vs. TrEMBL
Match: D7TG95_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_558.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00007428001 PE=4 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.036e-17
Identity = 44/63 (69.84%), Postives = 56/63 (88.89%), Query Frame = -1
Query:  118 RQIIFFKSDCDEKDKEMNFERQSLSERQKVLQQEQERLLQSKSLLNQREDHLFSRSQELNRLQ 306
            R++I FKSDCDEK+KE+  ERQSLSERQK +QQ QERL+  ++LLNQRE+++FSRSQELNRL+
Sbjct:  208 RRLISFKSDCDEKEKEIILERQSLSERQKNVQQGQERLIDGQALLNQREEYIFSRSQELNRLE 270          
BLAST of FE669974 vs. TrEMBL
Match: B9SX77_RICCO (Filamin-A-interacting protein, putative OS=Ricinus communis GN=RCOM_0858960 PE=4 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 8.006e-14
Identity = 37/63 (58.73%), Postives = 54/63 (85.71%), Query Frame = -1
Query:  118 RQIIFFKSDCDEKDKEMNFERQSLSERQKVLQQEQERLLQSKSLLNQREDHLFSRSQELNRLQ 306
            R+I  F++DCD K+KE++ ERQ+LSER+K+LQQE ER+L  ++LLNQRED++ S+SQEL+ L+
Sbjct:  210 RRISTFRADCDAKEKEIDLERQTLSERRKLLQQEHERVLDGQALLNQREDYIASKSQELDCLE 272          
BLAST of FE669974 vs. TrEMBL
Match: D2YZU6_APIGR (Nuclear matrix constituent protein 2 OS=Apium graveolens GN=NMCP2 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 8.851e-13
Identity = 36/61 (59.02%), Postives = 46/61 (75.41%), Query Frame = -1
Query:  124 RQIIFFKSDCDEKDKEMNFERQSLSERQKVLQQEQERLLQSKSLLNQREDHLFSRSQELNR 306
            R+   FK++CD KD+E   ERQSL ERQK LQQ Q+RL+  + LLN+RE H+F R+QELNR
Sbjct:  209 RRAASFKTECDTKDEEFLHERQSLCERQKSLQQSQQRLVDGQELLNKRESHIFDRTQELNR 269          
BLAST of FE669974 vs. TrEMBL
Match: D2YZU8_DAUCA (Nuclear matrix constituent protein 2 OS=Daucus carota GN=NMCP2 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 9.786e-12
Identity = 33/61 (54.10%), Postives = 47/61 (77.05%), Query Frame = -1
Query:  124 RQIIFFKSDCDEKDKEMNFERQSLSERQKVLQQEQERLLQSKSLLNQREDHLFSRSQELNR 306
            R+   FK++CD K++E+  ER+ L+ERQK LQQ Q+RL+  + LLN+RE H+F R+QELNR
Sbjct:  210 RRATSFKTECDTKEEEILHERRLLNERQKALQQSQQRLVDGQDLLNKRESHIFERTQELNR 270          
BLAST of FE669974 vs. TAIR peptide
Match: AT5G65780.2 (| Symbols: ATBCAT-5 | branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) | chr5:26311587-26315610 FORWARD LENGTH=1018)

HSP 1 Score: 79.337 bits (194), Expect = 5.211e-16
Identity = 40/83 (48.19%), Postives = 55/83 (66.27%), Query Frame = -1
Query:   58 RQIIFFKSDCDEKDKEMNFERQSLSERQKVLQQEQERLLQSKSLLNQREDHLFSRSQELNRLQXXXXXXXXXXXXDNEALHDK 306
            R++  FKS+C+ K+ EM  ERQ+L+ER+K LQQE ERLL ++  LNQREDH+F+RSQEL  L+            + +A  DK
Sbjct:  227 RRLASFKSECETKENEMVIERQTLNERRKSLQQEHERLLDAQVSLNQREDHIFARSQELAELEKGLDTAKTTFEEERKAFEDK 309          
BLAST of FE669974 vs. TAIR peptide
Match: AT5G65770.3 (| Symbols: LINC4 | little nuclei4 | chr5:26311587-26315610 FORWARD LENGTH=1010)

HSP 1 Score: 79.337 bits (194), Expect = 5.211e-16
Identity = 40/83 (48.19%), Postives = 55/83 (66.27%), Query Frame = -1
Query:   58 RQIIFFKSDCDEKDKEMNFERQSLSERQKVLQQEQERLLQSKSLLNQREDHLFSRSQELNRLQXXXXXXXXXXXXDNEALHDK 306
            R++  FKS+C+ K+ EM  ERQ+L+ER+K LQQE ERLL ++  LNQREDH+F+RSQEL  L+            + +A  DK
Sbjct:  219 RRLASFKSECETKENEMVIERQTLNERRKSLQQEHERLLDAQVSLNQREDHIFARSQELAELEKGLDTAKTTFEEERKAFEDK 301          
BLAST of FE669974 vs. TAIR peptide
Match: AT5G65770.2 (| Symbols: LINC4 | little nuclei4 | chr5:26311587-26315544 FORWARD LENGTH=1042)

HSP 1 Score: 79.337 bits (194), Expect = 5.211e-16
Identity = 40/83 (48.19%), Postives = 55/83 (66.27%), Query Frame = -1
Query:   58 RQIIFFKSDCDEKDKEMNFERQSLSERQKVLQQEQERLLQSKSLLNQREDHLFSRSQELNRLQXXXXXXXXXXXXDNEALHDK 306
            R++  FKS+C+ K+ EM  ERQ+L+ER+K LQQE ERLL ++  LNQREDH+F+RSQEL  L+            + +A  DK
Sbjct:  219 RRLASFKSECETKENEMVIERQTLNERRKSLQQEHERLLDAQVSLNQREDHIFARSQELAELEKGLDTAKTTFEEERKAFEDK 301          
BLAST of FE669974 vs. TAIR peptide
Match: AT5G65770.1 (| Symbols: LINC4 | little nuclei4 | chr5:26311587-26315610 FORWARD LENGTH=1010)

HSP 1 Score: 79.337 bits (194), Expect = 5.211e-16
Identity = 40/83 (48.19%), Postives = 55/83 (66.27%), Query Frame = -1
Query:   58 RQIIFFKSDCDEKDKEMNFERQSLSERQKVLQQEQERLLQSKSLLNQREDHLFSRSQELNRLQXXXXXXXXXXXXDNEALHDK 306
            R++  FKS+C+ K+ EM  ERQ+L+ER+K LQQE ERLL ++  LNQREDH+F+RSQEL  L+            + +A  DK
Sbjct:  219 RRLASFKSECETKENEMVIERQTLNERRKSLQQEHERLLDAQVSLNQREDHIFARSQELAELEKGLDTAKTTFEEERKAFEDK 301          
The following BLAST results are available for this feature:
BLAST of FE669974 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
NMCP_ARATH6.605e-1548.19Putative nuclear matrix constituent protein 1-like... [more]
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BLAST of FE669974 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 4
Match NameE-valueIdentityDescription
D7TG95_VITVI2.036e-1769.84Whole genome shotgun sequence of line PN40024, sca... [more]
B9SX77_RICCO8.006e-1458.73Filamin-A-interacting protein, putative OS=Ricinus... [more]
D2YZU6_APIGR8.851e-1359.02Nuclear matrix constituent protein 2 OS=Apium grav... [more]
D2YZU8_DAUCA9.786e-1254.10Nuclear matrix constituent protein 2 OS=Daucus car... [more]
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BLAST of FE669974 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
AT5G65780.25.211e-1648.19| Symbols: ATBCAT-5 | branched-chain amino acid am... [more]
AT5G65770.35.211e-1648.19| Symbols: LINC4 | little nuclei4 | chr5:26311587-... [more]
AT5G65770.25.211e-1648.19| Symbols: LINC4 | little nuclei4 | chr5:26311587-... [more]
AT5G65770.15.211e-1648.19| Symbols: LINC4 | little nuclei4 | chr5:26311587-... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 64..76
score: NAcoord: 84..102
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FE669974 ID=FE669974; Name=FE669974; organism=Cicer arietinum; type=EST; length=306bp
AGTGAGTGCCTCCTCTTGTTGTAGTAGGGTGGCCTCCAGTAGTTTTAGGC
TGGTTTGCTTGTCATGGAGGGCTTCATTGTCCTTTTCAGTTTTCAACTTT
GTGTCCTCCAACTCTTTTTGAAGACGATTTAGTTCCTGAGATCTACTAAA
AAGATGATCCTCTCTCTGGTTAAGCAAAGATTTTGATTGAAGTAACCTTT
CTTGTTCTTGTTGCAAAACCTTTTGCCTTTCAGAGAGGGATTGCCTCTCA
AAATTCATCTCCTTATCTTTTTCATCACAATCCGACTTGAAAAATATGAT
TTGCCG
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