FE671258

EST Overview


Name	FE671258
Unique Name	FE671258
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	548

Libraries


Library Name	Type
LIBEST_022820 Drought-stressed chickpea leave library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of FE671258 vs. SwissProt
Match: RSP41_ARATH (Arginine/serine-rich-splicing factor RSP41 OS=Arabidopsis thaliana GN=RSP41 PE=1 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 6.788e-11
Identity = 26/36 (72.22%), Postives = 35/36 (97.22%), Query Frame = 1

Query:   97 MKPIFCGNLDFDARQSDVERLFRKYGKIDRVDLKSG 204
            MKP+FCGN ++DAR+SD+ERLFRKYGK++RVD+K+G
Sbjct:    1 MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAG 36

HSP 2 Score: 56.9954 bits (136), Expect = 7.025e-8
Identity = 26/34 (76.47%), Postives = 30/34 (88.24%), Query Frame = 3

Query:  447 AGFAFIYMEDERDAEYAIRRLDQTEFGRKGRRIR 548
            AGFAF+YMEDERDAE AIR LD+ E+GR GRR+R
Sbjct:   35 AGFAFVYMEDERDAEDAIRALDRFEYGRTGRRLR 68

[Close]

BLAST of FE671258 vs. SwissProt
Match: RSP40_ARATH (Arginine/serine-rich-splicing factor RSP40 OS=Arabidopsis thaliana GN=RSP40 PE=1 SV=2)

HSP 1 Score: 65.4698 bits (158), Expect = 1.975e-10
Identity = 25/36 (69.44%), Postives = 34/36 (94.44%), Query Frame = 1

Query:   97 MKPIFCGNLDFDARQSDVERLFRKYGKIDRVDLKSG 204
            MKP+FCGN ++DAR+ D+ERLFRKYGK++RVD+K+G
Sbjct:    1 MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAG 36

HSP 2 Score: 60.4622 bits (145), Expect = 6.354e-9
Identity = 28/34 (82.35%), Postives = 31/34 (91.18%), Query Frame = 3

Query:  447 AGFAFIYMEDERDAEYAIRRLDQTEFGRKGRRIR 548
            AGFAF+YMEDERDAE AIR LD+ EFGRKGRR+R
Sbjct:   35 AGFAFVYMEDERDAEDAIRALDRFEFGRKGRRLR 68

[Close]

BLAST of FE671258 vs. SwissProt
Match: RSP31_ARATH (Arginine/serine-rich-splicing factor RSP31 OS=Arabidopsis thaliana GN=RSP31 PE=1 SV=2)

HSP 1 Score: 58.9214 bits (141), Expect = 1.849e-8
Identity = 23/36 (63.89%), Postives = 32/36 (88.89%), Query Frame = 1

Query:   97 MKPIFCGNLDFDARQSDVERLFRKYGKIDRVDLKSG 204
            M+P+F GN +++ RQSD+ERLF KYG++DRVD+KSG
Sbjct:    1 MRPVFVGNFEYETRQSDLERLFDKYGRVDRVDMKSG 36

[Close]

BLAST of FE671258 vs. TrEMBL
Match: D7U7J8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_48.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00027521001 PE=4 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.852e-29
Identity = 35/41 (85.37%), Postives = 40/41 (97.56%), Query Frame = 1

Query:   91 KKMKPIFCGNLDFDARQSDVERLFRKYGKIDRVDLKSGLLG 213
            + MKPIFCGNL++DARQSDVERLFR+YGK+DRVDLKSGLLG
Sbjct:   77 RNMKPIFCGNLEYDARQSDVERLFRRYGKVDRVDLKSGLLG 117

HSP 2 Score: 73.1738 bits (178), Expect = 2.852e-29
Identity = 35/60 (58.33%), Postives = 38/60 (63.33%), Query Frame = 2

Query:  239 GWMCFSAFLYRMCPRFSFLYFSRRNILICLSPAILHSLNIHCFFIPHEFCSVFNFRHVST 418
            GW     F   +CP F+FL FS R  LIC    ILHSL  HC FIPH+ CSV NFRHVST
Sbjct:  125 GWALLH-FFSSICPDFAFLCFSGRTNLICNGTTILHSLRHHCLFIPHDLCSVLNFRHVST 183

[Close]

BLAST of FE671258 vs. TrEMBL
Match: B7FHI0_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.162e-13
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 1

Query:   97 MKPIFCGNLDFDARQSDVERLFRKYGKIDRVDLKSG 204
            MKPIFCGNLDFDARQSDVERLFRKYGKIDRVDLKSG
Sbjct:    1 MKPIFCGNLDFDARQSDVERLFRKYGKIDRVDLKSG 36

HSP 2 Score: 68.1662 bits (165), Expect = 4.090e-10
Identity = 32/34 (94.12%), Postives = 33/34 (97.06%), Query Frame = 3

Query:  447 AGFAFIYMEDERDAEYAIRRLDQTEFGRKGRRIR 548
            +GFAFIYME ERDAEYAIRRLDQTEFGRKGRRIR
Sbjct:   35 SGFAFIYMEGERDAEYAIRRLDQTEFGRKGRRIR 68

[Close]

BLAST of FE671258 vs. TrEMBL
Match: C6TL81_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.346e-12
Identity = 32/36 (88.89%), Postives = 36/36 (100.00%), Query Frame = 1

Query:   97 MKPIFCGNLDFDARQSDVERLFRKYGKIDRVDLKSG 204
            MKP+FCGNLDFDARQSDVERLFR+YGK+DRVD+KSG
Sbjct:    1 MKPVFCGNLDFDARQSDVERLFRRYGKVDRVDMKSG 36

HSP 2 Score: 68.9366 bits (167), Expect = 2.398e-10
Identity = 31/34 (91.18%), Postives = 34/34 (100.00%), Query Frame = 3

Query:  447 AGFAFIYMEDERDAEYAIRRLDQTEFGRKGRRIR 548
            +GFAF+YMEDERDAEYAIRRLD+TEFGRKGRRIR
Sbjct:   35 SGFAFVYMEDERDAEYAIRRLDRTEFGRKGRRIR 68

[Close]

BLAST of FE671258 vs. TrEMBL
Match: D7TMW7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_100.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00010624001 PE=4 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.660e-11
Identity = 30/38 (78.95%), Postives = 37/38 (97.37%), Query Frame = 1

Query:   94 KMKPIFCGNLDFDARQSDVERLFRKYGKIDRVDLKSGL 207
            KM+PIFCGN D+DARQSD+ERLFR+YGK+DRVD+K+GL
Sbjct:   12 KMRPIFCGNFDYDARQSDLERLFRRYGKVDRVDMKTGL 49

[Close]

BLAST of FE671258 vs. TrEMBL
Match: B9GPU9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_849165 PE=4 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.241e-11
Identity = 31/36 (86.11%), Postives = 35/36 (97.22%), Query Frame = 1

Query:   97 MKPIFCGNLDFDARQSDVERLFRKYGKIDRVDLKSG 204
            MK IFCGNLD+DARQSDVERLFR+YG+IDRVD+KSG
Sbjct:    1 MKAIFCGNLDYDARQSDVERLFRRYGRIDRVDMKSG 36

HSP 2 Score: 66.2402 bits (160), Expect = 1.554e-9
Identity = 33/54 (61.11%), Postives = 40/54 (74.07%), Query Frame = 3

Query:  390 QCSISDMFQHMNHDDFATV-AGFAFIYMEDERDAEYAIRRLDQTEFGRKGRRIR 548
            Q  +  +F+     D   + +GFAF+YMEDERDAE AIRRLDQTEFGRKGRR+R
Sbjct:   15 QSDVERLFRRYGRIDRVDMKSGFAFVYMEDERDAEDAIRRLDQTEFGRKGRRLR 68

[Close]

BLAST of FE671258 vs. TrEMBL
Match: B9GPU7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_644386 PE=4 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.241e-11
Identity = 31/36 (86.11%), Postives = 35/36 (97.22%), Query Frame = 1

Query:   97 MKPIFCGNLDFDARQSDVERLFRKYGKIDRVDLKSG 204
            MK IFCGNLD+DARQSDVERLFR+YG+IDRVD+KSG
Sbjct:    1 MKAIFCGNLDYDARQSDVERLFRRYGRIDRVDMKSG 36

HSP 2 Score: 66.2402 bits (160), Expect = 1.554e-9
Identity = 33/54 (61.11%), Postives = 40/54 (74.07%), Query Frame = 3

Query:  390 QCSISDMFQHMNHDDFATV-AGFAFIYMEDERDAEYAIRRLDQTEFGRKGRRIR 548
            Q  +  +F+     D   + +GFAF+YMEDERDAE AIRRLDQTEFGRKGRR+R
Sbjct:   15 QSDVERLFRRYGRIDRVDMKSGFAFVYMEDERDAEDAIRRLDQTEFGRKGRRLR 68

[Close]

BLAST of FE671258 vs. TrEMBL
Match: B9F269_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_05182 PE=4 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.406e-10
Identity = 28/41 (68.29%), Postives = 37/41 (90.24%), Query Frame = 1

Query:   82 VTLKKMKPIFCGNLDFDARQSDVERLFRKYGKIDRVDLKSG 204
            V   KM+P+FCGNLD+DARQS++ERLF KYG+++RVD+KSG
Sbjct:    7 VACPKMRPVFCGNLDYDARQSEIERLFSKYGRVERVDMKSG 47

HSP 2 Score: 59.3066 bits (142), Expect = 1.900e-7
Identity = 26/34 (76.47%), Postives = 31/34 (91.18%), Query Frame = 3

Query:  447 AGFAFIYMEDERDAEYAIRRLDQTEFGRKGRRIR 548
            +GFAF+YMEDERDA+ AI RLD+ EFGRKGRR+R
Sbjct:   46 SGFAFVYMEDERDADEAIHRLDRIEFGRKGRRLR 79

[Close]

BLAST of FE671258 vs. TrEMBL
Match: B8AGX7_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_05650 PE=4 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.406e-10
Identity = 28/41 (68.29%), Postives = 37/41 (90.24%), Query Frame = 1

Query:   82 VTLKKMKPIFCGNLDFDARQSDVERLFRKYGKIDRVDLKSG 204
            V   KM+P+FCGNLD+DARQS++ERLF KYG+++RVD+KSG
Sbjct:  320 VACPKMRPVFCGNLDYDARQSEIERLFSKYGRVERVDMKSG 360

HSP 2 Score: 59.3066 bits (142), Expect = 1.900e-7
Identity = 26/34 (76.47%), Postives = 31/34 (91.18%), Query Frame = 3

Query:  447 AGFAFIYMEDERDAEYAIRRLDQTEFGRKGRRIR 548
            +GFAF+YMEDERDA+ AI RLD+ EFGRKGRR+R
Sbjct:  359 SGFAFVYMEDERDADEAIHRLDRIEFGRKGRRLR 392

[Close]

BLAST of FE671258 vs. TrEMBL
Match: Q6R4Q7_VITRI (Splicing factor-like protein OS=Vitis riparia PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.836e-10
Identity = 28/36 (77.78%), Postives = 35/36 (97.22%), Query Frame = 1

Query:   97 MKPIFCGNLDFDARQSDVERLFRKYGKIDRVDLKSG 204
            M+PIFCGN D+DARQSD+ERLFR+YGK+DRVD+K+G
Sbjct:    1 MRPIFCGNFDYDARQSDLERLFRRYGKVDRVDMKTG 36

HSP 2 Score: 58.9214 bits (141), Expect = 2.481e-7
Identity = 28/33 (84.85%), Postives = 30/33 (90.91%), Query Frame = 3

Query:  450 GFAFIYMEDERDAEYAIRRLDQTEFGRKGRRIR 548
            GFAFIYMEDERDAE AIR LD+T FGRKGRR+R
Sbjct:   36 GFAFIYMEDERDAEDAIRGLDRTGFGRKGRRLR 68

[Close]

BLAST of FE671258 vs. TrEMBL
Match: C6TAB8_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.836e-10
Identity = 28/37 (75.68%), Postives = 36/37 (97.30%), Query Frame = 1

Query:   94 KMKPIFCGNLDFDARQSDVERLFRKYGKIDRVDLKSG 204
            KM+PIFCGN ++DARQS++ERLFR+YGK+DRVD+KSG
Sbjct:    5 KMRPIFCGNFEYDARQSELERLFRRYGKVDRVDMKSG 41

HSP 2 Score: 60.8474 bits (146), Expect = 6.529e-8
Identity = 28/34 (82.35%), Postives = 31/34 (91.18%), Query Frame = 3

Query:  447 AGFAFIYMEDERDAEYAIRRLDQTEFGRKGRRIR 548
            +GFAFIYMEDERDAE AIR LD+ EFGRKGRR+R
Sbjct:   40 SGFAFIYMEDERDAEAAIRALDRVEFGRKGRRLR 73

[Close]

BLAST of FE671258 vs. TAIR peptide
Match: AT5G52040.2 (| Symbols: ATRSP41, RS41, At-RS41 | RNA-binding (RRM/RBD/RNP motifs) family protein | chr5:21131081-21133318 FORWARD LENGTH=357)

HSP 1 Score: 67.0106 bits (162), Expect = 7.338e-12
Identity = 26/36 (72.22%), Postives = 35/36 (97.22%), Query Frame = 1

Query:   97 MKPIFCGNLDFDARQSDVERLFRKYGKIDRVDLKSG 204
            MKP+FCGN ++DAR+SD+ERLFRKYGK++RVD+K+G
Sbjct:    1 MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAG 36

HSP 2 Score: 56.9954 bits (136), Expect = 7.594e-9
Identity = 26/34 (76.47%), Postives = 30/34 (88.24%), Query Frame = 3

Query:  447 AGFAFIYMEDERDAEYAIRRLDQTEFGRKGRRIR 548
            AGFAF+YMEDERDAE AIR LD+ E+GR GRR+R
Sbjct:   35 AGFAFVYMEDERDAEDAIRALDRFEYGRTGRRLR 68

[Close]

BLAST of FE671258 vs. TAIR peptide
Match: AT5G52040.1 (| Symbols: ATRSP41, RS41, At-RS41 | RNA-binding (RRM/RBD/RNP motifs) family protein | chr5:21131081-21133318 FORWARD LENGTH=356)

HSP 1 Score: 67.0106 bits (162), Expect = 7.338e-12
Identity = 26/36 (72.22%), Postives = 35/36 (97.22%), Query Frame = 1

Query:   97 MKPIFCGNLDFDARQSDVERLFRKYGKIDRVDLKSG 204
            MKP+FCGN ++DAR+SD+ERLFRKYGK++RVD+K+G
Sbjct:    1 MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAG 36

HSP 2 Score: 56.9954 bits (136), Expect = 7.594e-9
Identity = 26/34 (76.47%), Postives = 30/34 (88.24%), Query Frame = 3

Query:  447 AGFAFIYMEDERDAEYAIRRLDQTEFGRKGRRIR 548
            AGFAF+YMEDERDAE AIR LD+ E+GR GRR+R
Sbjct:   35 AGFAFVYMEDERDAEDAIRALDRFEYGRTGRRLR 68

[Close]

BLAST of FE671258 vs. TAIR peptide
Match: AT4G25500.4 (| Symbols: RSP35, RS40, At-RS40 | arginine/serine-rich splicing factor 35 | chr4:13025168-13027243 FORWARD LENGTH=350)

HSP 1 Score: 65.4698 bits (158), Expect = 2.135e-11
Identity = 25/36 (69.44%), Postives = 34/36 (94.44%), Query Frame = 1

Query:   97 MKPIFCGNLDFDARQSDVERLFRKYGKIDRVDLKSG 204
            MKP+FCGN ++DAR+ D+ERLFRKYGK++RVD+K+G
Sbjct:    1 MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAG 36

HSP 2 Score: 60.4622 bits (145), Expect = 6.868e-10
Identity = 28/34 (82.35%), Postives = 31/34 (91.18%), Query Frame = 3

Query:  447 AGFAFIYMEDERDAEYAIRRLDQTEFGRKGRRIR 548
            AGFAF+YMEDERDAE AIR LD+ EFGRKGRR+R
Sbjct:   35 AGFAFVYMEDERDAEDAIRALDRFEFGRKGRRLR 68

[Close]

BLAST of FE671258 vs. TAIR peptide
Match: AT4G25500.1 (| Symbols: ATRSP35, ATRSP40, AT-SRP40, RSP35, RS40, At-RS40 | arginine/serine-rich splicing factor 35 | chr4:13025168-13027243 FORWARD LENGTH=350)

HSP 1 Score: 65.4698 bits (158), Expect = 2.135e-11
Identity = 25/36 (69.44%), Postives = 34/36 (94.44%), Query Frame = 1

Query:   97 MKPIFCGNLDFDARQSDVERLFRKYGKIDRVDLKSG 204
            MKP+FCGN ++DAR+ D+ERLFRKYGK++RVD+K+G
Sbjct:    1 MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAG 36

HSP 2 Score: 60.4622 bits (145), Expect = 6.868e-10
Identity = 28/34 (82.35%), Postives = 31/34 (91.18%), Query Frame = 3

Query:  447 AGFAFIYMEDERDAEYAIRRLDQTEFGRKGRRIR 548
            AGFAF+YMEDERDAE AIR LD+ EFGRKGRR+R
Sbjct:   35 AGFAFVYMEDERDAEDAIRALDRFEFGRKGRRLR 68

[Close]

BLAST of FE671258 vs. TAIR peptide
Match: AT4G25500.3 (| Symbols: ATRSP35, ATRSP40, AT-SRP40, RSP35, RS40, At-RS40 | arginine/serine-rich splicing factor 35 | chr4:13025850-13027243 FORWARD LENGTH=317)

HSP 1 Score: 58.9214 bits (141), Expect = 1.998e-9
Identity = 27/33 (81.82%), Postives = 30/33 (90.91%), Query Frame = 3

Query:  450 GFAFIYMEDERDAEYAIRRLDQTEFGRKGRRIR 548
            GFAF+YMEDERDAE AIR LD+ EFGRKGRR+R
Sbjct:    3 GFAFVYMEDERDAEDAIRALDRFEFGRKGRRLR 35

[Close]

BLAST of FE671258 vs. TAIR peptide
Match: AT3G61860.1 (| Symbols: ATRSP31, RSP31, At-RS31, RS31 | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:22900311-22902159 REVERSE LENGTH=264)

HSP 1 Score: 58.9214 bits (141), Expect = 1.998e-9
Identity = 23/36 (63.89%), Postives = 32/36 (88.89%), Query Frame = 1

Query:   97 MKPIFCGNLDFDARQSDVERLFRKYGKIDRVDLKSG 204
            M+P+F GN +++ RQSD+ERLF KYG++DRVD+KSG
Sbjct:    1 MRPVFVGNFEYETRQSDLERLFDKYGRVDRVDMKSG 36

[Close]

BLAST of FE671258 vs. TAIR peptide
Match: AT5G52040.4 (| Symbols: RS41, At-RS41 | RNA-binding (RRM/RBD/RNP motifs) family protein | chr5:21131881-21133318 FORWARD LENGTH=324)

HSP 1 Score: 55.4546 bits (132), Expect = 2.209e-8
Identity = 25/33 (75.76%), Postives = 29/33 (87.88%), Query Frame = 3

Query:  450 GFAFIYMEDERDAEYAIRRLDQTEFGRKGRRIR 548
            GFAF+YMEDERDAE AIR LD+ E+GR GRR+R
Sbjct:    3 GFAFVYMEDERDAEDAIRALDRFEYGRTGRRLR 35

[Close]

BLAST of FE671258 vs. TAIR peptide
Match: AT5G52040.3 (| Symbols: RS41, At-RS41 | RNA-binding (RRM/RBD/RNP motifs) family protein | chr5:21131791-21133318 FORWARD LENGTH=329)

HSP 1 Score: 53.1434 bits (126), Expect = 1.097e-7
Identity = 24/32 (75.00%), Postives = 28/32 (87.50%), Query Frame = 3

Query:  453 FAFIYMEDERDAEYAIRRLDQTEFGRKGRRIR 548
            FAF+YMEDERDAE AIR LD+ E+GR GRR+R
Sbjct:   10 FAFVYMEDERDAEDAIRALDRFEYGRTGRRLR 41

[Close]

BLAST of FE671258 vs. TAIR peptide
Match: AT2G46610.1 (| Symbols: RS31a, At-RS31a | RNA-binding (RRM/RBD/RNP motifs) family protein | chr2:19136769-19138492 REVERSE LENGTH=250)

HSP 1 Score: 51.6026 bits (122), Expect = 3.190e-7
Identity = 20/36 (55.56%), Postives = 29/36 (80.56%), Query Frame = 1

Query:   97 MKPIFCGNLDFDARQSDVERLFRKYGKIDRVDLKSG 204
            M+ ++ GN D+D R SD+ERLF K+G++ RVD+KSG
Sbjct:    1 MRHVYVGNFDYDTRHSDLERLFSKFGRVKRVDMKSG 36

The following BLAST results are available for this feature:

BLAST of FE671258 vs. SwissProt
BLAST of FE671258 vs. TrEMBL
BLAST of FE671258 vs. TAIR peptide

BLAST of FE671258 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 3


Match Name	E-value	Identity	Description
RSP41_ARATH	6.788e-11	72.22	Arginine/serine-rich-splicing factor RSP41 OS=Arab...	[more]
RSP40_ARATH	1.975e-10	69.44	Arginine/serine-rich-splicing factor RSP40 OS=Arab...	[more]
RSP31_ARATH	1.849e-8	63.89	Arginine/serine-rich-splicing factor RSP31 OS=Arab...	[more]

BLAST of FE671258 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
D7U7J8_VITVI	2.852e-29	85.37	Whole genome shotgun sequence of line PN40024, sca...	[more]
B7FHI0_MEDTR	5.162e-13	100.00	Putative uncharacterized protein OS=Medicago trunc...	[more]
C6TL81_SOYBN	3.346e-12	88.89	Putative uncharacterized protein OS=Glycine max PE...	[more]
D7TMW7_VITVI	1.660e-11	78.95	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9GPU9_POPTR	8.241e-11	86.11	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9GPU7_POPTR	8.241e-11	86.11	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9F269_ORYSJ	1.406e-10	68.29	Putative uncharacterized protein OS=Oryza sativa s...	[more]
B8AGX7_ORYSI	1.406e-10	68.29	Putative uncharacterized protein OS=Oryza sativa s...	[more]
Q6R4Q7_VITRI	1.836e-10	77.78	Splicing factor-like protein OS=Vitis riparia PE=2...	[more]
C6TAB8_SOYBN	1.836e-10	75.68	Putative uncharacterized protein OS=Glycine max PE...	[more]

BLAST of FE671258 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 9


Match Name	E-value	Identity	Description
AT5G52040.2	7.338e-12	72.22	\| Symbols: ATRSP41, RS41, At-RS41 \| RNA-binding (R...	[more]
AT5G52040.1	7.338e-12	72.22	\| Symbols: ATRSP41, RS41, At-RS41 \| RNA-binding (R...	[more]
AT4G25500.4	2.135e-11	69.44	\| Symbols: RSP35, RS40, At-RS40 \| arginine/serine-...	[more]
AT4G25500.1	2.135e-11	69.44	\| Symbols: ATRSP35, ATRSP40, AT-SRP40, RSP35, RS40...	[more]
AT4G25500.3	1.998e-9	81.82	\| Symbols: ATRSP35, ATRSP40, AT-SRP40, RSP35, RS40...	[more]
AT3G61860.1	1.998e-9	63.89	\| Symbols: ATRSP31, RSP31, At-RS31, RS31 \| RNA-bin...	[more]
AT5G52040.4	2.209e-8	75.76	\| Symbols: RS41, At-RS41 \| RNA-binding (RRM/RBD/RN...	[more]
AT5G52040.3	1.097e-7	75.00	\| Symbols: RS41, At-RS41 \| RNA-binding (RRM/RBD/RN...	[more]
AT2G46610.1	3.190e-7	55.56	\| Symbols: RS31a, At-RS31a \| RNA-binding (RRM/RBD/...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 14..45 score: 1.4
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 38..70 score: 1.5
IPR012677	Nucleotide-binding, alpha-beta plait	GENE3D	3.30.70.330	no description	coord: 13..43 score: 1.5
IPR012677	Nucleotide-binding, alpha-beta plait	GENE3D	3.30.70.330	no description	coord: 41..75 score: 0.0
None	No IPR available	PANTHER	PTHR10548	ARGININE/SERINE-RICH SPLICING FACTOR	coord: 11..45 score: 1.2
None	No IPR available	PANTHER	PTHR10548	ARGININE/SERINE-RICH SPLICING FACTOR	coord: 44..76 score: 4.7

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FE671258 ID=FE671258; Name=FE671258; organism=Cicer arietinum; type=EST; length=548bp
ATTCATTTGCCCCAAATCTCAGACCTAGGGTTTCACTTGCAAACCTTCTT
CTTCCGAAAAGGTTGATTGCAAAAGAATATCGTAACTTTGAAGAAAATGA
AGCCCATTTTTTGCGGAAACCTGGATTTCGACGCAAGACAATCTGATGTT
GAGAGGCTTTTCAGAAAATACGGGAAGATTGATAGAGTTGACTTGAAGTC
TGGATTACTTGGAAAGTTGGAATGTCCATGGTCTTCTTGGATGGATGTGC
TTCTCTGCATTTCTTTATAGAATGTGCCCCCGCTTCTCCTTCTTGTATTT
TTCCAGAAGAAATATTCTGATCTGCCTTAGCCCTGCCATTCTGCATTCCC
TCAACATTCATTGCTTTTTCATTCCTCATGAGTTTTGCTCAGTGTTCAAT
TTCCGACATGTTTCAACATATGAACCATGATGATTTCGCAACTGTGGCAG
GGTTTGCTTTTATCTACATGGAGGATGAACGTGATGCCGAGTATGCAATC
AGACGACTTGATCAAACAGAATTTGGTAGAAAAGGGCGCCGGATTCGT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0000166	nucleotide binding

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf

Search form