FE671971

EST Overview


Name	FE671971
Unique Name	FE671971
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	152

Libraries


Library Name	Type
LIBEST_022820 Drought-stressed chickpea leave library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of FE671971 vs. SwissProt
Match: TIM17_ARATH (Mitochondrial import inner membrane translocase subunit Tim17 OS=Arabidopsis thaliana GN=TIM17 PE=2 SV=2)

HSP 1 Score: 56.9954 bits (136), Expect = 3.578e-8
Identity = 27/46 (58.70%), Postives = 32/46 (69.57%), Query Frame = 3

Query:   15 GSGAVGGAAFYGDAGLYNSPTGARLSGATQAVRILAQAVGGSFAVW 152
            G GAVGG+AF+   G YNSP G+R  G TQ+V + A   GGSFAVW
Sbjct:   24 GMGAVGGSAFHFIKGTYNSPKGSRFVGGTQSVSMNAPRTGGSFAVW 69

[Close]

BLAST of FE671971 vs. TrEMBL
Match: B9RKH3_RICCO (Mitochondrial import inner membrane translocase subunit tim17, putative OS=Ricinus communis GN=RCOM_1049400 PE=4 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.152e-10
Identity = 33/46 (71.74%), Postives = 37/46 (80.43%), Query Frame = 3

Query:   15 GSGAVGGAAFYGDAGLYNSPTGARLSGATQAVRILAQAVGGSFAVW 152
            G GAVGG+AF+   G+YNSPTGARL G TQAVR+ A  VGGSFAVW
Sbjct:   24 GMGAVGGSAFHFIKGIYNSPTGARLIGGTQAVRMNAPRVGGSFAVW 69

[Close]

BLAST of FE671971 vs. TrEMBL
Match: C5XDW4_SORBI (Putative uncharacterized protein Sb02g038750 OS=Sorghum bicolor GN=Sb02g038750 PE=4 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 3.485e-9
Identity = 31/46 (67.39%), Postives = 35/46 (76.09%), Query Frame = 3

Query:   15 GSGAVGGAAFYGDAGLYNSPTGARLSGATQAVRILAQAVGGSFAVW 152
            G GAVGG+AF+   G+YNSP G RLSG  QAVR+ A  VGGSFAVW
Sbjct:   24 GMGAVGGSAFHFIKGIYNSPNGMRLSGGAQAVRMNAPRVGGSFAVW 69

[Close]

BLAST of FE671971 vs. TrEMBL
Match: B9N332_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_750203 PE=4 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 3.485e-9
Identity = 31/46 (67.39%), Postives = 36/46 (78.26%), Query Frame = 3

Query:   15 GSGAVGGAAFYGDAGLYNSPTGARLSGATQAVRILAQAVGGSFAVW 152
            G GAVGG+AF+   G+YNSP+G RL G TQAVR+ A  VGGSFAVW
Sbjct:   24 GMGAVGGSAFHFIKGVYNSPSGTRLIGGTQAVRMNAPRVGGSFAVW 69

[Close]

BLAST of FE671971 vs. TrEMBL
Match: D7KIZ9_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_472263 PE=4 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 4.551e-9
Identity = 30/46 (65.22%), Postives = 35/46 (76.09%), Query Frame = 3

Query:   15 GSGAVGGAAFYGDAGLYNSPTGARLSGATQAVRILAQAVGGSFAVW 152
            G GAVGG+AF+   G+YNSP GARLSG  QA+R+    VGGSFAVW
Sbjct:   24 GMGAVGGSAFHLIKGIYNSPAGARLSGGVQAIRMNGPLVGGSFAVW 69

[Close]

BLAST of FE671971 vs. TrEMBL
Match: B9HKZ5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_565047 PE=4 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 4.551e-9
Identity = 31/46 (67.39%), Postives = 37/46 (80.43%), Query Frame = 3

Query:   15 GSGAVGGAAFYGDAGLYNSPTGARLSGATQAVRILAQAVGGSFAVW 152
            G GAVGG+AF+   G++NSP+GARL G TQAVR+ A  VGGSFAVW
Sbjct:   24 GMGAVGGSAFHFLKGVHNSPSGARLMGGTQAVRMNAPRVGGSFAVW 69

[Close]

BLAST of FE671971 vs. TrEMBL
Match: B6SUP6_MAIZE (Mitochondrial import inner membrane translocase subunit Tim17 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 5.944e-9
Identity = 30/46 (65.22%), Postives = 35/46 (76.09%), Query Frame = 3

Query:   15 GSGAVGGAAFYGDAGLYNSPTGARLSGATQAVRILAQAVGGSFAVW 152
            G GAVGG+AF+   G+YNSP G R+SG  QAVR+ A  VGGSFAVW
Sbjct:   24 GMGAVGGSAFHFIKGIYNSPNGMRMSGGAQAVRMNAPRVGGSFAVW 69

[Close]

BLAST of FE671971 vs. TrEMBL
Match: Q38M66_SOLTU (Putative uncharacterized protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.014e-8
Identity = 30/46 (65.22%), Postives = 35/46 (76.09%), Query Frame = 3

Query:   15 GSGAVGGAAFYGDAGLYNSPTGARLSGATQAVRILAQAVGGSFAVW 152
            G GAVGG+AF+   G+YNSP G RL G TQAVR+ A  +GGSFAVW
Sbjct:   24 GMGAVGGSAFHFLKGIYNSPKGERLIGGTQAVRMNAPRIGGSFAVW 69

[Close]

BLAST of FE671971 vs. TrEMBL
Match: C0HHS3_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 2.259e-8
Identity = 29/46 (63.04%), Postives = 34/46 (73.91%), Query Frame = 3

Query:   15 GSGAVGGAAFYGDAGLYNSPTGARLSGATQAVRILAQAVGGSFAVW 152
            G GAVGG+A++   G+YNSP G RLSG  Q VR+ A  VGGSFAVW
Sbjct:   24 GMGAVGGSAYHFIKGIYNSPNGMRLSGGAQTVRMNAPRVGGSFAVW 69

[Close]

BLAST of FE671971 vs. TrEMBL
Match: B6TP97_MAIZE (Mitochondrial import inner membrane translocase subunit Tim17 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 2.259e-8
Identity = 29/46 (63.04%), Postives = 34/46 (73.91%), Query Frame = 3

Query:   15 GSGAVGGAAFYGDAGLYNSPTGARLSGATQAVRILAQAVGGSFAVW 152
            G GAVGG+A++   G+YNSP G RLSG  Q VR+ A  VGGSFAVW
Sbjct:   24 GMGAVGGSAYHFIKGIYNSPNGMRLSGGAQTVRMNAPRVGGSFAVW 69

[Close]

BLAST of FE671971 vs. TrEMBL
Match: D7TBG4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00015301001 PE=4 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 5.032e-8
Identity = 29/46 (63.04%), Postives = 35/46 (76.09%), Query Frame = 3

Query:   15 GSGAVGGAAFYGDAGLYNSPTGARLSGATQAVRILAQAVGGSFAVW 152
            G GAVGG+AF+   G+YNSP G R+ G +QAVR+ A  VGGSFAVW
Sbjct:   24 GMGAVGGSAFHFLKGIYNSPKGERVIGGSQAVRMNAPRVGGSFAVW 69

[Close]

BLAST of FE671971 vs. TAIR peptide
Match: AT2G37410.2 (| Symbols: ATTIM17-2, TIM17, TIM17-2 | translocase inner membrane subunit 17-2 | chr2:15698119-15698850 REVERSE LENGTH=243)

HSP 1 Score: 56.9954 bits (136), Expect = 2.742e-9
Identity = 27/46 (58.70%), Postives = 32/46 (69.57%), Query Frame = 3

Query:   15 GSGAVGGAAFYGDAGLYNSPTGARLSGATQAVRILAQAVGGSFAVW 152
            G GAVGG+AF+   G YNSP G+R  G TQ+V + A   GGSFAVW
Sbjct:   24 GMGAVGGSAFHFIKGTYNSPKGSRFVGGTQSVSMNAPRTGGSFAVW 69

[Close]

BLAST of FE671971 vs. TAIR peptide
Match: AT2G37410.1 (| Symbols: ATTIM17-2, TIM17, TIM17-2 | translocase inner membrane subunit 17-2 | chr2:15698119-15698850 REVERSE LENGTH=243)

HSP 1 Score: 56.9954 bits (136), Expect = 2.742e-9
Identity = 27/46 (58.70%), Postives = 32/46 (69.57%), Query Frame = 3

Query:   15 GSGAVGGAAFYGDAGLYNSPTGARLSGATQAVRILAQAVGGSFAVW 152
            G GAVGG+AF+   G YNSP G+R  G TQ+V + A   GGSFAVW
Sbjct:   24 GMGAVGGSAFHFIKGTYNSPKGSRFVGGTQSVSMNAPRTGGSFAVW 69

[Close]

BLAST of FE671971 vs. TAIR peptide
Match: AT1G20350.1 (| Symbols: ATTIM17-1, TIM17-1 | translocase inner membrane subunit 17-1 | chr1:7043737-7044393 FORWARD LENGTH=218)

HSP 1 Score: 56.6102 bits (135), Expect = 3.581e-9
Identity = 26/44 (59.09%), Postives = 33/44 (75.00%), Query Frame = 3

Query:   21 GAVGGAAFYGDAGLYNSPTGARLSGATQAVRILAQAVGGSFAVW 152
            GAVGG+A++   G+YNSP GARLSG  QA+R+     GGSF+VW
Sbjct:   26 GAVGGSAYHLIRGIYNSPGGARLSGGVQALRMSGPRSGGSFSVW 69

[Close]

BLAST of FE671971 vs. TAIR peptide
Match: AT5G11690.1 (| Symbols: ATTIM17-3, TIM17-3 | translocase inner membrane subunit 17-3 | chr5:3761759-3762160 FORWARD LENGTH=133)

HSP 1 Score: 50.8322 bits (120), Expect = 1.965e-7
Identity = 24/46 (52.17%), Postives = 32/46 (69.57%), Query Frame = 3

Query:   15 GSGAVGGAAFYGDAGLYNSPTGARLSGATQAVRILAQAVGGSFAVW 152
            G+GAVGG+ ++   G YNSP GAR  G TQA  + A  +GG+FAV+
Sbjct:   24 GAGAVGGSVYHFVRGAYNSPIGARYVGGTQAASMNAPRLGGTFAVF 69

The following BLAST results are available for this feature:

BLAST of FE671971 vs. SwissProt
BLAST of FE671971 vs. TrEMBL
BLAST of FE671971 vs. TAIR peptide

BLAST of FE671971 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 1


Match Name	E-value	Identity	Description
TIM17_ARATH	3.578e-8	58.70	Mitochondrial import inner membrane translocase su...	[more]

BLAST of FE671971 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9RKH3_RICCO	3.152e-10	71.74	Mitochondrial import inner membrane translocase su...	[more]
C5XDW4_SORBI	3.485e-9	67.39	Putative uncharacterized protein Sb02g038750 OS=So...	[more]
B9N332_POPTR	3.485e-9	67.39	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7KIZ9_ARALY	4.551e-9	65.22	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
B9HKZ5_POPTR	4.551e-9	67.39	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B6SUP6_MAIZE	5.944e-9	65.22	Mitochondrial import inner membrane translocase su...	[more]
Q38M66_SOLTU	1.014e-8	65.22	Putative uncharacterized protein OS=Solanum tubero...	[more]
C0HHS3_MAIZE	2.259e-8	63.04	Putative uncharacterized protein OS=Zea mays PE=2 ...	[more]
B6TP97_MAIZE	2.259e-8	63.04	Mitochondrial import inner membrane translocase su...	[more]
D7TBG4_VITVI	5.032e-8	63.04	Whole genome shotgun sequence of line PN40024, sca...	[more]

BLAST of FE671971 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 4


Match Name	E-value	Identity	Description
AT2G37410.2	2.742e-9	58.70	\| Symbols: ATTIM17-2, TIM17, TIM17-2 \| translocase...	[more]
AT2G37410.1	2.742e-9	58.70	\| Symbols: ATTIM17-2, TIM17, TIM17-2 \| translocase...	[more]
AT1G20350.1	3.581e-9	59.09	\| Symbols: ATTIM17-1, TIM17-1 \| translocase inner ...	[more]
AT5G11690.1	1.965e-7	52.17	\| Symbols: ATTIM17-3, TIM17-3 \| translocase inner ...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 5..23 score
None	No IPR available	PANTHER	PTHR10485	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM17	coord: 7..50 score: 1.1

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FE671971 ID=FE671971; Name=FE671971; organism=Cicer arietinum; type=EST; length=152bp
AGGCGGTGCTTATCGGCTCGGGTGCCGTTGGTGGCGCCGCTTTCTACGGC
GACGCAGGTCTCTACAACTCCCCCACGGGTGCTCGCCTCTCCGGCGCGAC
GCAAGCCGTTCGTATCCTCGCCCAGGCTGTCGGCGGCAGTTTTGCCGTCT
GG

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