FE673371

EST Overview
NameFE673371
Unique NameFE673371
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length442
Libraries
Library NameType
LIBEST_022820 Drought-stressed chickpea leave librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Homology
[Close]
BLAST of FE673371 vs. TrEMBL
Match: Q9T0P0_ARATH (Sigma factorB (Fragment) OS=Arabidopsis thaliana GN=SigB PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.521e-12
Identity = 37/41 (90.24%), Postives = 40/41 (97.56%), Query Frame = -2 
Query:  319 EDISKRIGLSRERVRQVGLVALEKLKHEARKREMEAMLLKH 441
            EDISKRIGLSRERVRQVGLVALEKLKH ARKR+MEAM+LK+
Sbjct:  460 EDISKRIGLSRERVRQVGLVALEKLKHAARKRKMEAMILKN 500
[Close]
BLAST of FE673371 vs. TrEMBL
Match: Q9FPH1_ARATH (At1g64860 OS=Arabidopsis thaliana GN=At1g64860/F13O11_16 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.521e-12
Identity = 37/41 (90.24%), Postives = 40/41 (97.56%), Query Frame = -2 
Query:  319 EDISKRIGLSRERVRQVGLVALEKLKHEARKREMEAMLLKH 441
            EDISKRIGLSRERVRQVGLVALEKLKH ARKR+MEAM+LK+
Sbjct:  462 EDISKRIGLSRERVRQVGLVALEKLKHAARKRKMEAMILKN 502
[Close]
BLAST of FE673371 vs. TrEMBL
Match: O24629_ARATH (AT1G64860 protein OS=Arabidopsis thaliana GN=SIG1 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.521e-12
Identity = 37/41 (90.24%), Postives = 40/41 (97.56%), Query Frame = -2 
Query:  319 EDISKRIGLSRERVRQVGLVALEKLKHEARKREMEAMLLKH 441
            EDISKRIGLSRERVRQVGLVALEKLKH ARKR+MEAM+LK+
Sbjct:  462 EDISKRIGLSRERVRQVGLVALEKLKHAARKRKMEAMILKN 502
[Close]
BLAST of FE673371 vs. TrEMBL
Match: O22576_ARATH (RNA polymerase sigma subunit 1 OS=Arabidopsis thaliana GN=RPOD1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.521e-12
Identity = 37/41 (90.24%), Postives = 40/41 (97.56%), Query Frame = -2 
Query:  319 EDISKRIGLSRERVRQVGLVALEKLKHEARKREMEAMLLKH 441
            EDISKRIGLSRERVRQVGLVALEKLKH ARKR+MEAM+LK+
Sbjct:  462 EDISKRIGLSRERVRQVGLVALEKLKHAARKRKMEAMILKN 502
[Close]
BLAST of FE673371 vs. TrEMBL
Match: O22057_ARATH (Plastid RNA polymerase sigma-subunit OS=Arabidopsis thaliana GN=SIG2 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.521e-12
Identity = 37/41 (90.24%), Postives = 40/41 (97.56%), Query Frame = -2 
Query:  319 EDISKRIGLSRERVRQVGLVALEKLKHEARKREMEAMLLKH 441
            EDISKRIGLSRERVRQVGLVALEKLKH ARKR+MEAM+LK+
Sbjct:  462 EDISKRIGLSRERVRQVGLVALEKLKHAARKRKMEAMILKN 502
[Close]
BLAST of FE673371 vs. TrEMBL
Match: D7KZ14_ARALY (RNA polymerase sigma subunit 1 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_893809 PE=4 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.521e-12
Identity = 37/41 (90.24%), Postives = 40/41 (97.56%), Query Frame = -2 
Query:  319 EDISKRIGLSRERVRQVGLVALEKLKHEARKREMEAMLLKH 441
            EDISKRIGLSRERVRQVGLVALEKLKH ARKR+MEAM+LK+
Sbjct:  463 EDISKRIGLSRERVRQVGLVALEKLKHAARKRKMEAMILKN 503
[Close]
BLAST of FE673371 vs. TrEMBL
Match: B9SDF8_RICCO (RNA polymerase sigma factor rpoD, putative OS=Ricinus communis GN=RCOM_1517450 PE=4 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.521e-12
Identity = 36/41 (87.80%), Postives = 40/41 (97.56%), Query Frame = -2 
Query:  319 EDISKRIGLSRERVRQVGLVALEKLKHEARKREMEAMLLKH 441
            EDISKRIGLSRERVRQVGLVALEKLKH ARK+++EAML+KH
Sbjct:  468 EDISKRIGLSRERVRQVGLVALEKLKHAARKKKLEAMLVKH 508
[Close]
BLAST of FE673371 vs. TrEMBL
Match: Q9SLX3_TOBAC (Sigma factor OS=Nicotiana tabacum GN=sigA2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.188e-11
Identity = 35/41 (85.37%), Postives = 39/41 (95.12%), Query Frame = -2 
Query:  319 EDISKRIGLSRERVRQVGLVALEKLKHEARKREMEAMLLKH 441
            EDIS+RIGLSRERVRQVGLVALEKLKH ARKR ++AML+KH
Sbjct:  462 EDISRRIGLSRERVRQVGLVALEKLKHAARKRRLDAMLVKH 502
[Close]
BLAST of FE673371 vs. TrEMBL
Match: O49935_SINAL (Sig1 protein OS=Sinapis alba GN=Sig1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.188e-11
Identity = 36/41 (87.80%), Postives = 40/41 (97.56%), Query Frame = -2 
Query:  319 EDISKRIGLSRERVRQVGLVALEKLKHEARKREMEAMLLKH 441
            EDIS+RIGLSRERVRQVGLVALEKLKH ARKR+MEAM+LK+
Sbjct:  441 EDISQRIGLSRERVRQVGLVALEKLKHAARKRKMEAMILKN 481
[Close]
BLAST of FE673371 vs. TrEMBL
Match: B9IPY1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_665539 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.188e-11
Identity = 36/41 (87.80%), Postives = 38/41 (92.68%), Query Frame = -2 
Query:  319 EDISKRIGLSRERVRQVGLVALEKLKHEARKREMEAMLLKH 441
            EDISKR+GLSRERVRQVGLVALEKLKH ARKR  EAML+KH
Sbjct:  469 EDISKRMGLSRERVRQVGLVALEKLKHAARKRNTEAMLVKH 509
[Close]
BLAST of FE673371 vs. TAIR peptide
Match: AT1G64860.1 (| Symbols: SIGA, SIG1, SIG2, SIGB, RPOD1 | sigma factor A | chr1:24098497-24100746 FORWARD LENGTH=502)

HSP 1 Score: 73.559 bits (179), Expect = 5.037e-14
Identity = 37/41 (90.24%), Postives = 40/41 (97.56%), Query Frame = -2 
Query:  319 EDISKRIGLSRERVRQVGLVALEKLKHEARKREMEAMLLKH 441
            EDISKRIGLSRERVRQVGLVALEKLKH ARKR+MEAM+LK+
Sbjct:  462 EDISKRIGLSRERVRQVGLVALEKLKHAARKRKMEAMILKN 502
The following BLAST results are available for this feature:
BLAST of FE673371 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
Q9T0P0_ARATH7.521e-1290.24Sigma factorB (Fragment) OS=Arabidopsis thaliana G... [more]
Q9FPH1_ARATH7.521e-1290.24At1g64860 OS=Arabidopsis thaliana GN=At1g64860/F13... [more]
O24629_ARATH7.521e-1290.24AT1G64860 protein OS=Arabidopsis thaliana GN=SIG1 ... [more]
O22576_ARATH7.521e-1290.24RNA polymerase sigma subunit 1 OS=Arabidopsis thal... [more]
O22057_ARATH7.521e-1290.24Plastid RNA polymerase sigma-subunit OS=Arabidopsi... [more]
D7KZ14_ARALY7.521e-1290.24RNA polymerase sigma subunit 1 OS=Arabidopsis lyra... [more]
B9SDF8_RICCO7.521e-1287.80RNA polymerase sigma factor rpoD, putative OS=Rici... [more]
Q9SLX3_TOBAC2.188e-1185.37Sigma factor OS=Nicotiana tabacum GN=sigA2 PE=2 SV... [more]
O49935_SINAL2.188e-1187.80Sig1 protein OS=Sinapis alba GN=Sig1 PE=2 SV=1[more]
B9IPY1_POPTR2.188e-1187.80Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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BLAST of FE673371 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G64860.15.037e-1490.24| Symbols: SIGA, SIG1, SIG2, SIGB, RPOD1 | sigma f... [more]
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Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FE673371 ID=FE673371; Name=FE673371; organism=Cicer arietinum; type=EST; length=442bp
TGCAGGTTTTTTTACTACATATAAACTATGTTTCTTCTGTTCTTCTTAAG
TAAAACTCATAATGAGTATAAATAAAAGTAGTCTACTGAGAATATCATAG
ATTTTTAACACCTCAAAGCGATACTTCAGTCTTGCAACTTATCCCATGAT
AAAAACATAATTTTTCCAAAAGGCAATAGTTTTAGGGGGTTTATGTACTT
TAATTTCTCTTGTATCGTCCTCTTTTGTCTATTTTGAATCAGGAAGTCAA
AGTTTTAGGTACATACTTCCTTTTTGTTCTGTATATATACATGCCTCTAT
GATGAGTCCATCATATCAATGTTTCAAAAGCATGGCTTCCATCTCTCTCT
TCCTTGCTTCATGTTTTAGTTTCTCCAATGCAACAAGTCCAACTTGCCTT
ACTCTTTCTCTTGACAAACCTATCCGTTTACTAATGTCTTCC
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