GR393679

EST Overview


Name	GR393679
Unique Name	GR393679
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	529

Libraries


Library Name	Type
LIBEST_024778 ICC1882 field drought stressed root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
KEGG analysis for Cicer arietinum unigene v1	2011-01-05
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR393679 vs. SwissProt
Match: DDB1_SOLLC (DNA damage-binding protein 1 OS=Solanum lycopersicum GN=DDB1 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.958e-36
Identity = 71/87 (81.61%), Postives = 81/87 (93.10%), Query Frame = -2

Query:  268 PHEQYVFLEKLQTNMRKVIKGIGGLSHEQWRSFNNEKKTVEARNFLDGDLIESFLDFKRSKMDEISKAMEVSVEELAKRIEELTRLH 528
            PH+QY+FLEKLQTN+RKVIKG+GGLSHEQWRSF NEKKTV+A+NFLDGDLIESFLD  R++M+EISKAM V VEEL KR+EELTRLH
Sbjct: 1004 PHDQYLFLEKLQTNLRKVIKGVGGLSHEQWRSFYNEKKTVDAKNFLDGDLIESFLDLSRNRMEEISKAMSVPVEELMKRVEELTRLH 1090

[Close]

BLAST of GR393679 vs. SwissProt
Match: DDB1_SOLCE (DNA damage-binding protein 1 OS=Solanum cheesmanii GN=DDB1 PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.958e-36
Identity = 71/87 (81.61%), Postives = 81/87 (93.10%), Query Frame = -2

Query:  268 PHEQYVFLEKLQTNMRKVIKGIGGLSHEQWRSFNNEKKTVEARNFLDGDLIESFLDFKRSKMDEISKAMEVSVEELAKRIEELTRLH 528
            PH+QY+FLEKLQTN+RKVIKG+GGLSHEQWRSF NEKKTV+A+NFLDGDLIESFLD  R++M+EISKAM V VEEL KR+EELTRLH
Sbjct: 1009 PHDQYLFLEKLQTNLRKVIKGVGGLSHEQWRSFYNEKKTVDAKNFLDGDLIESFLDLSRNRMEEISKAMSVPVEELMKRVEELTRLH 1095

[Close]

BLAST of GR393679 vs. SwissProt
Match: DDB1A_ARATH (DNA damage-binding protein 1a OS=Arabidopsis thaliana GN=DDB1A PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.165e-35
Identity = 69/87 (79.31%), Postives = 79/87 (90.80%), Query Frame = -2

Query:  268 PHEQYVFLEKLQTNMRKVIKGIGGLSHEQWRSFNNEKKTVEARNFLDGDLIESFLDFKRSKMDEISKAMEVSVEELAKRIEELTRLH 528
            P EQY FLEKLQ+++RKVIKG+GGLSHEQWRSFNNEK+T EARNFLDGDLIESFLD  R+KM++ISK+M V VEEL KR+EELTRLH
Sbjct: 1002 PQEQYTFLEKLQSSLRKVIKGVGGLSHEQWRSFNNEKRTAEARNFLDGDLIESFLDLSRNKMEDISKSMNVQVEELCKRVEELTRLH 1088

[Close]

BLAST of GR393679 vs. SwissProt
Match: DDB1B_ARATH (DNA damage-binding protein 1b OS=Arabidopsis thaliana GN=DDB1B PE=1 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 8.227e-35
Identity = 68/87 (78.16%), Postives = 77/87 (88.51%), Query Frame = -2

Query:  268 PHEQYVFLEKLQTNMRKVIKGIGGLSHEQWRSFNNEKKTVEARNFLDGDLIESFLDFKRSKMDEISKAMEVSVEELAKRIEELTRLH 528
            P EQY FLEKLQT++RKVIKG+GGLSHEQWRSFNNEK+T EA+ +LDGDLIESFLD  R KM+EISK M+V VEEL KR+EELTRLH
Sbjct: 1002 PQEQYAFLEKLQTSLRKVIKGVGGLSHEQWRSFNNEKRTAEAKGYLDGDLIESFLDLSRGKMEEISKGMDVQVEELCKRVEELTRLH 1088

[Close]

BLAST of GR393679 vs. SwissProt
Match: DDB1_CHICK (DNA damage-binding protein 1 OS=Gallus gallus GN=DDB1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.459e-15
Identity = 42/93 (45.16%), Postives = 55/93 (59.14%), Query Frame = -2

Query:  268 YVFLEKLQTNMRKVIKGIGGLSHEQWRSFNNEKKTVEARNFLDGDLIESFLDFKRSKMDEI----------SKAMEVSVEELAKRIEELTRLH 516
            Y  L  +Q  + KVIK +G + H  WRSF+ E+KT  A  F+DGDLIESFLD  R KM E+              E +V++L K +EELTR+H
Sbjct: 1048 YNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQIDDGSGMKREATVDDLIKIVEELTRIH 1140

[Close]

BLAST of GR393679 vs. SwissProt
Match: DDB1_XENLA (DNA damage-binding protein 1 OS=Xenopus laevis GN=ddb1 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.905e-15
Identity = 42/93 (45.16%), Postives = 55/93 (59.14%), Query Frame = -2

Query:  268 YVFLEKLQTNMRKVIKGIGGLSHEQWRSFNNEKKTVEARNFLDGDLIESFLDFKRSKMDEI----------SKAMEVSVEELAKRIEELTRLH 516
            Y  L  +Q  + KVIK +G + H  WRSF+ E+KT  A  F+DGDLIESFLD  R KM E+              E +V++L K +EELTR+H
Sbjct: 1048 YNLLLDVQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVIANLQIDDGSGMKRETTVDDLIKVVEELTRIH 1140

[Close]

BLAST of GR393679 vs. SwissProt
Match: DDB1_DICDI (DNA damage-binding protein 1 OS=Dictyostelium discoideum GN=repE PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.905e-15
Identity = 33/81 (40.74%), Postives = 56/81 (69.14%), Query Frame = -2

Query:  280 EQYVFLEKLQTNMRKVIKGIGGLSHEQWRSFNNEKKTVEARNFLDGDLIESFLDFKRSKMDEISKAMEVSVEELAKRIEEL 522
            E ++F  KLQ  + +V++G+GG SHE WR+F+N+  T++++NF+DGDLIE+FLD K     +    + ++ ++  +RIE L
Sbjct: 1096 EDFIFFSKLQKGLNQVVRGVGGFSHETWRAFSNDHHTIDSKNFIDGDLIETFLDLKYESQLKAVADLGITPDDAFRRIESL 1176

[Close]

BLAST of GR393679 vs. SwissProt
Match: DDB1_RAT (DNA damage-binding protein 1 OS=Rattus norvegicus GN=Ddb1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.245e-15
Identity = 41/93 (44.09%), Postives = 54/93 (58.06%), Query Frame = -2

Query:  268 YVFLEKLQTNMRKVIKGIGGLSHEQWRSFNNEKKTVEARNFLDGDLIESFLDFKRSKMDEI----------SKAMEVSVEELAKRIEELTRLH 516
            Y  L  +Q  + KVIK +G + H  WRSF+ E+KT  A  F+DGDLIESFLD  R KM E+              E + ++L K +EELTR+H
Sbjct: 1048 YNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1140

[Close]

BLAST of GR393679 vs. SwissProt
Match: DDB1_PONAB (DNA damage-binding protein 1 OS=Pongo abelii GN=DDB1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.245e-15
Identity = 41/93 (44.09%), Postives = 54/93 (58.06%), Query Frame = -2

Query:  268 YVFLEKLQTNMRKVIKGIGGLSHEQWRSFNNEKKTVEARNFLDGDLIESFLDFKRSKMDEI----------SKAMEVSVEELAKRIEELTRLH 516
            Y  L  +Q  + KVIK +G + H  WRSF+ E+KT  A  F+DGDLIESFLD  R KM E+              E + ++L K +EELTR+H
Sbjct: 1048 YNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1140

[Close]

BLAST of GR393679 vs. SwissProt
Match: DDB1_MOUSE (DNA damage-binding protein 1 OS=Mus musculus GN=Ddb1 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 4.245e-15
Identity = 41/93 (44.09%), Postives = 54/93 (58.06%), Query Frame = -2

Query:  268 YVFLEKLQTNMRKVIKGIGGLSHEQWRSFNNEKKTVEARNFLDGDLIESFLDFKRSKMDEI----------SKAMEVSVEELAKRIEELTRLH 516
            Y  L  +Q  + KVIK +G + H  WRSF+ E+KT  A  F+DGDLIESFLD  R KM E+              E + ++L K +EELTR+H
Sbjct: 1048 YNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1140

[Close]

BLAST of GR393679 vs. TrEMBL
Match: B9GJF7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_753194 PE=4 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.121e-38
Identity = 75/87 (86.21%), Postives = 84/87 (96.55%), Query Frame = -2

Query:  268 PHEQYVFLEKLQTNMRKVIKGIGGLSHEQWRSFNNEKKTVEARNFLDGDLIESFLDFKRSKMDEISKAMEVSVEELAKRIEELTRLH 528
            PHEQY+FLEKLQ+N+RKVIKG+GGLSHEQWRSFNNEKKTV+A+NFLDGDLIESFLD  RS+MDEISKAME+SVEEL KR+EELTRLH
Sbjct: 1002 PHEQYLFLEKLQSNLRKVIKGVGGLSHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRSRMDEISKAMEISVEELCKRVEELTRLH 1088

[Close]

BLAST of GR393679 vs. TrEMBL
Match: B9SKT9_RICCO (DNA repair protein xp-E, putative OS=Ricinus communis GN=RCOM_1091910 PE=4 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 7.772e-37
Identity = 73/87 (83.91%), Postives = 83/87 (95.40%), Query Frame = -2

Query:  268 PHEQYVFLEKLQTNMRKVIKGIGGLSHEQWRSFNNEKKTVEARNFLDGDLIESFLDFKRSKMDEISKAMEVSVEELAKRIEELTRLH 528
            PHEQY+FLEKLQ+N+R+VIKG+GGLSHEQWRSFNNEKKTVEA+NFLDGDLIESFLD  R++MDEISKA+ VSVEEL KR+EELTRLH
Sbjct:  947 PHEQYIFLEKLQSNLRRVIKGVGGLSHEQWRSFNNEKKTVEAKNFLDGDLIESFLDLSRNRMDEISKAIGVSVEELCKRVEELTRLH 1033

[Close]

BLAST of GR393679 vs. TrEMBL
Match: D7M2J3_ARALY (UV-damaged DNA-binding protein 1A OS=Arabidopsis lyrata subsp. lyrata GN=DDB1A PE=4 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.764e-34
Identity = 69/87 (79.31%), Postives = 79/87 (90.80%), Query Frame = -2

Query:  268 PHEQYVFLEKLQTNMRKVIKGIGGLSHEQWRSFNNEKKTVEARNFLDGDLIESFLDFKRSKMDEISKAMEVSVEELAKRIEELTRLH 528
            P EQY FLEKLQ+++RKVIKG+GGLSHEQWRSFNNEK+T EARNFLDGDLIESFLD  R+KM++ISK+M V VEEL KR+EELTRLH
Sbjct: 1002 PQEQYTFLEKLQSSLRKVIKGVGGLSHEQWRSFNNEKRTAEARNFLDGDLIESFLDLSRNKMEDISKSMNVQVEELCKRVEELTRLH 1088

[Close]

BLAST of GR393679 vs. TrEMBL
Match: B3H6I9_ARATH (Uncharacterized protein At4g05420.2 OS=Arabidopsis thaliana GN=At4g05420 PE=4 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.764e-34
Identity = 69/87 (79.31%), Postives = 79/87 (90.80%), Query Frame = -2

Query:  268 PHEQYVFLEKLQTNMRKVIKGIGGLSHEQWRSFNNEKKTVEARNFLDGDLIESFLDFKRSKMDEISKAMEVSVEELAKRIEELTRLH 528
            P EQY FLEKLQ+++RKVIKG+GGLSHEQWRSFNNEK+T EARNFLDGDLIESFLD  R+KM++ISK+M V VEEL KR+EELTRLH
Sbjct:  981 PQEQYTFLEKLQSSLRKVIKGVGGLSHEQWRSFNNEKRTAEARNFLDGDLIESFLDLSRNKMEDISKSMNVQVEELCKRVEELTRLH 1067

[Close]

BLAST of GR393679 vs. TrEMBL
Match: D7MFF3_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_492777 PE=4 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 8.043e-34
Identity = 68/87 (78.16%), Postives = 78/87 (89.66%), Query Frame = -2

Query:  268 PHEQYVFLEKLQTNMRKVIKGIGGLSHEQWRSFNNEKKTVEARNFLDGDLIESFLDFKRSKMDEISKAMEVSVEELAKRIEELTRLH 528
            P EQY FLEKLQT++RKVIKG+GGLSHEQWRSFNNEK+T EA+++LDGDLIESFLD  R KM+EISK M+V VEEL KR+EELTRLH
Sbjct: 1002 PQEQYAFLEKLQTSLRKVIKGVGGLSHEQWRSFNNEKRTAEAKSYLDGDLIESFLDLSRGKMEEISKGMDVQVEELCKRVEELTRLH 1088

[Close]

BLAST of GR393679 vs. TrEMBL
Match: B7ZY61_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 5.213e-33
Identity = 67/87 (77.01%), Postives = 78/87 (89.66%), Query Frame = -2

Query:  268 PHEQYVFLEKLQTNMRKVIKGIGGLSHEQWRSFNNEKKTVEARNFLDGDLIESFLDFKRSKMDEISKAMEVSVEELAKRIEELTRLH 528
            PH+QY+FLEKLQ+ + K IKG+G LSHEQWRSF+N+KKT EARNFLDGDLIESFLD  RSKM+E+SKAM V VEEL+KR+EELTRLH
Sbjct:  330 PHDQYIFLEKLQSTLVKYIKGVGNLSHEQWRSFHNDKKTAEARNFLDGDLIESFLDLSRSKMEEVSKAMGVPVEELSKRVEELTRLH 416

[Close]

BLAST of GR393679 vs. TrEMBL
Match: C6ZDB9_BRADI (Putative DNA damage binding protein (Fragment) OS=Brachypodium distachyon GN=cdo393 PE=4 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.981e-32
Identity = 67/87 (77.01%), Postives = 77/87 (88.51%), Query Frame = -2

Query:  268 PHEQYVFLEKLQTNMRKVIKGIGGLSHEQWRSFNNEKKTVEARNFLDGDLIESFLDFKRSKMDEISKAMEVSVEELAKRIEELTRLH 528
            PH+QYVFLEKLQ+ + K IKG+G LSH+QWRSF+NEKKT EARNFLDGDLIESFLD  RSKM+E+SK M VSVE L+KR+EELTRLH
Sbjct:  298 PHDQYVFLEKLQSILGKFIKGVGSLSHDQWRSFHNEKKTAEARNFLDGDLIESFLDLNRSKMEEVSKGMGVSVENLSKRVEELTRLH 384

[Close]

BLAST of GR393679 vs. TrEMBL
Match: Q9FS08_ORYSJ (UV-damaged DNA binding protein OS=Oryza sativa subsp. japonica GN=OsUV-DDB PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 4.413e-32
Identity = 66/87 (75.86%), Postives = 77/87 (88.51%), Query Frame = -2

Query:  268 PHEQYVFLEKLQTNMRKVIKGIGGLSHEQWRSFNNEKKTVEARNFLDGDLIESFLDFKRSKMDEISKAMEVSVEELAKRIEELTRLH 528
            PHEQYVFLEKLQ+ + K IKG+G LSHEQWRSF+N+KKT EARNFLDGDLIESFLD  R+KM+E++K M V VEEL+KR+EELTRLH
Sbjct: 1004 PHEQYVFLEKLQSTLVKFIKGVGNLSHEQWRSFHNDKKTSEARNFLDGDLIESFLDLSRNKMEEVAKGMGVPVEELSKRVEELTRLH 1090

[Close]

BLAST of GR393679 vs. TrEMBL
Match: Q6L4S0_ORYSJ (Os05g0592400 protein OS=Oryza sativa subsp. japonica GN=P0663C08.8 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 4.413e-32
Identity = 66/87 (75.86%), Postives = 77/87 (88.51%), Query Frame = -2

Query:  268 PHEQYVFLEKLQTNMRKVIKGIGGLSHEQWRSFNNEKKTVEARNFLDGDLIESFLDFKRSKMDEISKAMEVSVEELAKRIEELTRLH 528
            PHEQYVFLEKLQ+ + K IKG+G LSHEQWRSF+N+KKT EARNFLDGDLIESFLD  R+KM+E++K M V VEEL+KR+EELTRLH
Sbjct: 1004 PHEQYVFLEKLQSTLVKFIKGVGNLSHEQWRSFHNDKKTSEARNFLDGDLIESFLDLSRNKMEEVAKGMGVPVEELSKRVEELTRLH 1090

[Close]

BLAST of GR393679 vs. TrEMBL
Match: B8AXJ2_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_21216 PE=4 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 4.413e-32
Identity = 66/87 (75.86%), Postives = 77/87 (88.51%), Query Frame = -2

Query:  268 PHEQYVFLEKLQTNMRKVIKGIGGLSHEQWRSFNNEKKTVEARNFLDGDLIESFLDFKRSKMDEISKAMEVSVEELAKRIEELTRLH 528
            PHEQYVFLEKLQ+ + K IKG+G LSHEQWRSF+N+KKT EARNFLDGDLIESFLD  R+KM+E++K M V VEEL+KR+EELTRLH
Sbjct: 1003 PHEQYVFLEKLQSTLVKFIKGVGNLSHEQWRSFHNDKKTSEARNFLDGDLIESFLDLSRNKMEEVAKGMGVPVEELSKRVEELTRLH 1089

[Close]

BLAST of GR393679 vs. TAIR peptide
Match: AT4G05420.2 (| Symbols: DDB1A | damaged DNA binding protein 1A | chr4:2746288-2752663 FORWARD LENGTH=1067)

HSP 1 Score: 148.288 bits (373), Expect = 2.334e-36
Identity = 69/87 (79.31%), Postives = 79/87 (90.80%), Query Frame = -2

Query:  268 PHEQYVFLEKLQTNMRKVIKGIGGLSHEQWRSFNNEKKTVEARNFLDGDLIESFLDFKRSKMDEISKAMEVSVEELAKRIEELTRLH 528
            P EQY FLEKLQ+++RKVIKG+GGLSHEQWRSFNNEK+T EARNFLDGDLIESFLD  R+KM++ISK+M V VEEL KR+EELTRLH
Sbjct:  981 PQEQYTFLEKLQSSLRKVIKGVGGLSHEQWRSFNNEKRTAEARNFLDGDLIESFLDLSRNKMEDISKSMNVQVEELCKRVEELTRLH 1067

[Close]

BLAST of GR393679 vs. TAIR peptide
Match: AT4G05420.1 (| Symbols: DDB1A | damaged DNA binding protein 1A | chr4:2746288-2752663 FORWARD LENGTH=1088)

HSP 1 Score: 148.288 bits (373), Expect = 2.334e-36
Identity = 69/87 (79.31%), Postives = 79/87 (90.80%), Query Frame = -2

Query:  268 PHEQYVFLEKLQTNMRKVIKGIGGLSHEQWRSFNNEKKTVEARNFLDGDLIESFLDFKRSKMDEISKAMEVSVEELAKRIEELTRLH 528
            P EQY FLEKLQ+++RKVIKG+GGLSHEQWRSFNNEK+T EARNFLDGDLIESFLD  R+KM++ISK+M V VEEL KR+EELTRLH
Sbjct: 1002 PQEQYTFLEKLQSSLRKVIKGVGGLSHEQWRSFNNEKRTAEARNFLDGDLIESFLDLSRNKMEDISKSMNVQVEELCKRVEELTRLH 1088

[Close]

BLAST of GR393679 vs. TAIR peptide
Match: AT4G21100.1 (| Symbols: DDB1B | damaged DNA binding protein 1B | chr4:11258916-11265309 REVERSE LENGTH=1088)

HSP 1 Score: 146.362 bits (368), Expect = 8.868e-36
Identity = 68/87 (78.16%), Postives = 77/87 (88.51%), Query Frame = -2

Query:  268 PHEQYVFLEKLQTNMRKVIKGIGGLSHEQWRSFNNEKKTVEARNFLDGDLIESFLDFKRSKMDEISKAMEVSVEELAKRIEELTRLH 528
            P EQY FLEKLQT++RKVIKG+GGLSHEQWRSFNNEK+T EA+ +LDGDLIESFLD  R KM+EISK M+V VEEL KR+EELTRLH
Sbjct: 1002 PQEQYAFLEKLQTSLRKVIKGVGGLSHEQWRSFNNEKRTAEAKGYLDGDLIESFLDLSRGKMEEISKGMDVQVEELCKRVEELTRLH 1088

The following BLAST results are available for this feature:

BLAST of GR393679 vs. SwissProt
BLAST of GR393679 vs. TrEMBL
BLAST of GR393679 vs. TAIR peptide

BLAST of GR393679 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
DDB1_SOLLC	1.958e-36	81.61	DNA damage-binding protein 1 OS=Solanum lycopersic...	[more]
DDB1_SOLCE	1.958e-36	81.61	DNA damage-binding protein 1 OS=Solanum cheesmanii...	[more]
DDB1A_ARATH	2.165e-35	79.31	DNA damage-binding protein 1a OS=Arabidopsis thali...	[more]
DDB1B_ARATH	8.227e-35	78.16	DNA damage-binding protein 1b OS=Arabidopsis thali...	[more]
DDB1_CHICK	1.459e-15	45.16	DNA damage-binding protein 1 OS=Gallus gallus GN=D...	[more]
DDB1_XENLA	1.905e-15	45.16	DNA damage-binding protein 1 OS=Xenopus laevis GN=...	[more]
DDB1_DICDI	1.905e-15	40.74	DNA damage-binding protein 1 OS=Dictyostelium disc...	[more]
DDB1_RAT	4.245e-15	44.09	DNA damage-binding protein 1 OS=Rattus norvegicus ...	[more]
DDB1_PONAB	4.245e-15	44.09	DNA damage-binding protein 1 OS=Pongo abelii GN=DD...	[more]
DDB1_MOUSE	4.245e-15	44.09	DNA damage-binding protein 1 OS=Mus musculus GN=Dd...	[more]

BLAST of GR393679 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9GJF7_POPTR	4.121e-38	86.21	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9SKT9_RICCO	7.772e-37	83.91	DNA repair protein xp-E, putative OS=Ricinus commu...	[more]
D7M2J3_ARALY	2.764e-34	79.31	UV-damaged DNA-binding protein 1A OS=Arabidopsis l...	[more]
B3H6I9_ARATH	2.764e-34	79.31	Uncharacterized protein At4g05420.2 OS=Arabidopsis...	[more]
D7MFF3_ARALY	8.043e-34	78.16	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
B7ZY61_MAIZE	5.213e-33	77.01	Putative uncharacterized protein OS=Zea mays PE=2 ...	[more]
C6ZDB9_BRADI	1.981e-32	77.01	Putative DNA damage binding protein (Fragment) OS=...	[more]
Q9FS08_ORYSJ	4.413e-32	75.86	UV-damaged DNA binding protein OS=Oryza sativa sub...	[more]
Q6L4S0_ORYSJ	4.413e-32	75.86	Os05g0592400 protein OS=Oryza sativa subsp. japoni...	[more]
B8AXJ2_ORYSI	4.413e-32	75.86	Putative uncharacterized protein OS=Oryza sativa s...	[more]

BLAST of GR393679 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT4G05420.2	2.334e-36	79.31	\| Symbols: DDB1A \| damaged DNA binding protein 1A ...	[more]
AT4G05420.1	2.334e-36	79.31	\| Symbols: DDB1A \| damaged DNA binding protein 1A ...	[more]
AT4G21100.1	8.868e-36	78.16	\| Symbols: DDB1B \| damaged DNA binding protein 1B ...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004871	Cleavage/polyadenylation specificity factor, A subunit, C-terminal	PFAM	PF03178	CPSF_A	coord: 2..56 score: 4.9
None	No IPR available	PANTHER	PTHR10644	DNA REPAIR/RNA PROCESSING CPSF FAMILY	coord: 3..87 score: 1
None	No IPR available	PANTHER	PTHR10644:SF3	DNA REPAIR PROTEIN XP-E	coord: 3..87 score: 1
None	No IPR available	SEG	seg	seg	coord: 3..27 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR393679 ID=GR393679; Name=GR393679; organism=Cicer arietinum; type=EST; length=529bp
CTTGAATGAAAATATTAAAAAAAAATGAAGGGTCTATAATGGAACGCCCA
GTTATGCCTTTACATATTAACAAACACCATTTGTTATCCACTGTCAAATG
CAAACCATTCCCTAGTCACATCATAACATCACTGAAGGCAAGCCAGGGGA
CAAGTATAAAACATGATACGTTTTTTAACCCCAACACAGCACCAAAAAAG
AAGGAAAAAAGTTTAAGGAGAATAAAGAATGAAGAAACACAAGATACTTC
AAATGAGGATAAACTCAGTGCAACCTAGTCAACTCTTCTATTCTTTTGGC
CAACTCCTCTACAGAAACTTCCATTGCCTTGGAAATCTCATCCATCTTAC
TGCGCTTGAAATCAAGAAATGATTCAATTAAATCCCCATCCAAAAAATTT
CTGGCCTCTACAGTTTTCTTCTCATTGTTAAATGATCTCCATTGCTCATG
GCTTAGTCCTCCAATGCCTTTAATCACCTTTCTCATGTTTGTTTGAAGCT
TCTCTAAGAAAACATACTGCTCATGAGGA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **INTERPRO**
Term	Definition
IPR004871	Cleavage/polyA-sp_fac_asu_C

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