GR393921
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR393921 vs. SwissProt
Match: CAID_SALAR (Carnitinyl-CoA dehydratase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=caiD PE=3 SV=1) HSP 1 Score: 53.9138 bits (128), Expect = 7.485e-7 Identity = 39/115 (33.91%), Postives = 57/115 (49.57%), Query Frame = 3 Query: 186 LITTAKGKFFSNGFDLQWARAADSKSAAMDRLQFMVDSLKPVAAAFLSLPMPTIAAVNGHASAAGFMLAIFHDYVLMRSDRGVLYMPEVNLGLPLPDYFAAVMREKIKSPVVLRD 530 +IT A KFFS G+DL+ A ++ A F + F L P IAAVNG+A GF LA+ D+++ +D +PE LG+ +PD + KI P ++ D Sbjct: 51 IITGAGEKFFSAGWDLKAAAEGEAPDA-----DFGPGGFAGLTELF-DLNKPVIAAVNGYAFGGGFELALAADFIIC-ADHASFALPEAKLGI-VPDSGGVLRLPKILPPAIVND 157
BLAST of GR393921 vs. TrEMBL
Match: Q2HUF7_MEDTR (Enoyl-CoA hydratase/isomerase OS=Medicago truncatula GN=MtrDRAFT_AC149135g7v2 PE=4 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.262e-62 Identity = 122/163 (74.85%), Postives = 131/163 (80.37%), Query Frame = 3 Query: 45 MCSLEKRGNLWILTLNGDDENRLNPXXXXXXXXXXXXXXXXXXPGSVLITTAKG-KFFSNGFDLQWARAADSKSAAMDRLQFMVDSLKPVAAAFLSLPMPTIAAVNGHASAAGFMLAIFHDYVLMRSDRGVLYMPEVNLGLPLPDYFAAVMREKIKSPVVLRD 530 MCSLEKRGNLWILT+ GDD+NRLNP PGSVLITTA G +FFSNGFDL WAR+A S SAA +RL MV SLKPVAAA +SLPMPTIAA+NGHASAAGF+LAI HDYVLMRSD+GVLYMPEVNLGLPLPDYFAAV EKIKSPVVLRD Sbjct: 1 MCSLEKRGNLWILTITGDDQNRLNPNLISSLLSTLTTLSSQSTPGSVLITTATGTRFFSNGFDLLWARSATSPSAATERLHSMVQSLKPVAAALMSLPMPTIAAINGHASAAGFLLAICHDYVLMRSDQGVLYMPEVNLGLPLPDYFAAVFGEKIKSPVVLRD 163 HSP 2 Score: 28.4906 bits (62), Expect = 1.262e-62 Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = 1 Query: 550 KLKGNEAVKIGIVDS 594 K+KG EAVK+GIVDS Sbjct: 170 KIKGKEAVKLGIVDS 184
BLAST of GR393921 vs. TrEMBL
Match: D7MH17_ARALY (Enoyl-CoA hydratase/isomerase family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_915422 PE=4 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 2.013e-47 Identity = 95/162 (58.64%), Postives = 116/162 (71.60%), Query Frame = 3 Query: 45 MCSLEKRGNLWILTLNGDDENRLNPXXXXXXXXXXXXXXXXXXPGSVLITTAKGKFFSNGFDLQWARAADSKSAAMDRLQFMVDSLKPVAAAFLSLPMPTIAAVNGHASAAGFMLAIFHDYVLMRSDRGVLYMPEVNLGLPLPDYFAAVMREKIKSPVVLRD 530 MC+LEKRG+L++LTL GD E+R +P GS+LITTA GKFFSNGFDL WA+ A SK+ A +RL MV+S KPV AA L LPMPTIAA+NGHA+AAG MLAI HDYV MR DRGVLYM EV++GL +PDYF+A++R KI + R+ Sbjct: 1 MCTLEKRGDLFLLTLTGDGEHRFHPDTIATILSLLEQAKSQSTRGSILITTANGKFFSNGFDLAWAQTAGSKTGAANRLHQMVESFKPVVAALLDLPMPTIAALNGHAAAAGLMLAISHDYVFMRKDRGVLYMSEVDIGLSMPDYFSALVRAKIGTSAARRE 162 HSP 2 Score: 24.6386 bits (52), Expect = 2.013e-47 Identity = 10/15 (66.67%), Postives = 13/15 (86.67%), Query Frame = 1 Query: 550 KLKGNEAVKIGIVDS 594 K++G EAV +GIVDS Sbjct: 169 KIRGEEAVGLGIVDS 183
BLAST of GR393921 vs. TrEMBL
Match: B9HUB0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_566113 PE=4 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 3.420e-47 Identity = 98/163 (60.12%), Postives = 117/163 (71.78%), Query Frame = 3 Query: 45 MCSLEKRG-NLWILTLNGDDENRLNPXXXXXXXXXXXXXXXXXXPGSVLITTAKGKFFSNGFDLQWARAADSKSAAMDRLQFMVDSLKPVAAAFLSLPMPTIAAVNGHASAAGFMLAIFHDYVLMRSDRGVLYMPEVNLGLPLPDYFAAVMREKIKSPVVLRD 530 MC+LEK G N++ILTL G DE+RLNP GSVLITT++GKFFSNGFDL WA+AA SK A +RL MV+ LKPV A +SLPMPTIAAVNGHA+AAG +LA+ HDY+ M+ DRGVLYM EV++GL PDYF A+ R K+ SP VLRD Sbjct: 1 MCTLEKTGTNIFILTLTGADEHRLNPTLIDSILSALRQAKSQATKGSVLITTSRGKFFSNGFDLAWAQAASSKPKATERLHHMVELLKPVVAELISLPMPTIAAVNGHAAAAGLILALSHDYIHMKRDRGVLYMSEVDIGLTFPDYFTALFRAKVGSPSVLRD 163 HSP 2 Score: 22.7126 bits (47), Expect = 3.420e-47 Identity = 9/15 (60.00%), Postives = 14/15 (93.33%), Query Frame = 1 Query: 550 KLKGNEAVKIGIVDS 594 K+KG+EAV+ GIV++ Sbjct: 170 KVKGDEAVRRGIVEA 184
BLAST of GR393921 vs. TrEMBL
Match: Q8LC07_ARATH (Carnitine racemase like protein OS=Arabidopsis thaliana PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 9.868e-47 Identity = 93/162 (57.41%), Postives = 116/162 (71.60%), Query Frame = 3 Query: 45 MCSLEKRGNLWILTLNGDDENRLNPXXXXXXXXXXXXXXXXXXPGSVLITTAKGKFFSNGFDLQWARAADSKSAAMDRLQFMVDSLKPVAAAFLSLPMPTIAAVNGHASAAGFMLAIFHDYVLMRSDRGVLYMPEVNLGLPLPDYFAAVMREKIKSPVVLRD 530 MC+LEKRG+L++LTL GD E+R +P GS+LITTA GKFFSNGFDL WA+ A SK+ A +RL MV+S KPV AA L LPMPTIAA+NGHA+AAG +LA+ HDYV MR DRGVLYM EV++GL +PDYF+A++R KI + R+ Sbjct: 1 MCTLEKRGDLFLLTLTGDGEHRFHPDTIATILSLLEQAKSQSTRGSILITTANGKFFSNGFDLAWAQTAGSKTGAANRLHQMVESFKPVVAALLDLPMPTIAALNGHAAAAGLILALSHDYVFMRKDRGVLYMSEVDIGLSMPDYFSALVRAKIGTSAARRE 162 HSP 2 Score: 24.6386 bits (52), Expect = 9.868e-47 Identity = 10/15 (66.67%), Postives = 13/15 (86.67%), Query Frame = 1 Query: 550 KLKGNEAVKIGIVDS 594 K++G EAV +GIVDS Sbjct: 169 KIRGEEAVGLGIVDS 183
BLAST of GR393921 vs. TrEMBL
Match: O23299_ARATH (AT4g14430/dl3255c OS=Arabidopsis thaliana GN=dl3255c PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 9.868e-47 Identity = 93/162 (57.41%), Postives = 116/162 (71.60%), Query Frame = 3 Query: 45 MCSLEKRGNLWILTLNGDDENRLNPXXXXXXXXXXXXXXXXXXPGSVLITTAKGKFFSNGFDLQWARAADSKSAAMDRLQFMVDSLKPVAAAFLSLPMPTIAAVNGHASAAGFMLAIFHDYVLMRSDRGVLYMPEVNLGLPLPDYFAAVMREKIKSPVVLRD 530 MC+LEKRG+L++LTL GD E+R +P GS+LITTA GKFFSNGFDL WA+ A SK+ A +RL MV+S KPV AA L LPMPTIAA+NGHA+AAG +LA+ HDYV MR DRGVLYM EV++GL +PDYF+A++R KI + R+ Sbjct: 1 MCTLEKRGDLFLLTLTGDGEHRFHPDTIATILSLLEQAKSQSTRGSILITTANGKFFSNGFDLAWAQTAGSKTGAANRLHQMVESFKPVVAALLDLPMPTIAALNGHAAAAGLILALSHDYVFMRKDRGVLYMSEVDIGLSMPDYFSALVRAKIGTSAARRE 162 HSP 2 Score: 24.6386 bits (52), Expect = 9.868e-47 Identity = 10/15 (66.67%), Postives = 13/15 (86.67%), Query Frame = 1 Query: 550 KLKGNEAVKIGIVDS 594 K++G EAV +GIVDS Sbjct: 169 KIRGEEAVGLGIVDS 183
BLAST of GR393921 vs. TrEMBL
Match: B9STJ1_RICCO (Catalytic, putative OS=Ricinus communis GN=RCOM_0492080 PE=4 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 2.844e-46 Identity = 96/164 (58.54%), Postives = 116/164 (70.73%), Query Frame = 3 Query: 45 MCSLEKRGNLWILTLNGDDENRLNPXXXXXXXXXXXXXXXXXXPGSVLITTAKGKFFSNGFDLQWAR--AADSKSAAMDRLQFMVDSLKPVAAAFLSLPMPTIAAVNGHASAAGFMLAIFHDYVLMRSDRGVLYMPEVNLGLPLPDYFAAVMREKIKSPVVLRD 530 MC+L K+GN + LTL+GDD++RLNP GSVLITT++GKFFSNGFDL WA+ AA +AM+RL MV S KPV A +SLPMPTIAA+ GHA+AAGF+ A+ HDYVLMRSD+GVLYM EV+LGLPLPDYF+A R KI + RD Sbjct: 20 MCTLSKQGNFFTLTLSGDDDHRLNPNLIATILSALQKIKSQATHGSVLITTSQGKFFSNGFDLAWAKKSAAADGGSAMERLHEMVVSFKPVIAEMISLPMPTIAALQGHAAAAGFLFALSHDYVLMRSDKGVLYMSEVDLGLPLPDYFSAAFRAKIYNVCTRRD 183 HSP 2 Score: 25.409 bits (54), Expect = 2.844e-46 Identity = 11/15 (73.33%), Postives = 14/15 (93.33%), Query Frame = 1 Query: 550 KLKGNEAVKIGIVDS 594 K+KG EAVK+GIVD+ Sbjct: 190 KVKGVEAVKMGIVDA 204
BLAST of GR393921 vs. TrEMBL
Match: O23300_ARATH (At4g14440 OS=Arabidopsis thaliana GN=dl3260c PE=1 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 4.367e-44 Identity = 89/162 (54.94%), Postives = 113/162 (69.75%), Query Frame = 3 Query: 45 MCSLEKRGNLWILTLNGDDENRLNPXXXXXXXXXXXXXXXXXXPGSVLITTAKGKFFSNGFDLQWARAADSKSAAMDRLQFMVDSLKPVAAAFLSLPMPTIAAVNGHASAAGFMLAIFHDYVLMRSDRGVLYMPEVNLGLPLPDYFAAVMREKIKSPVVLRD 530 MC+LEKRG+L++LTL G+DE+R +P GSVLITT GKFFSNGFDL WA++A A+ R+ MV S KPV AA L LPMPTIAA+NGHA+A+G M A+ HDYV MR DRGVLYM EV++GLP+PDYF+A++ K+ S + R+ Sbjct: 1 MCTLEKRGDLFLLTLTGEDEHRFHPDTIASVLSLLEQAKSQSTKGSVLITTGHGKFFSNGFDLAWAQSAGH--GAIKRMHQMVKSFKPVLAALLDLPMPTIAALNGHAAASGLMFALSHDYVFMRKDRGVLYMSEVDIGLPVPDYFSALVVAKVGSGIARRE 160 HSP 2 Score: 26.9498 bits (58), Expect = 4.367e-44 Identity = 12/15 (80.00%), Postives = 13/15 (86.67%), Query Frame = 1 Query: 550 KLKGNEAVKIGIVDS 594 KLKG EAV +GIVDS Sbjct: 167 KLKGEEAVALGIVDS 181
BLAST of GR393921 vs. TrEMBL
Match: D7MH16_ARALY (Enoyl-CoA hydratase/isomerase family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_915421 PE=4 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 9.665e-44 Identity = 89/162 (54.94%), Postives = 113/162 (69.75%), Query Frame = 3 Query: 45 MCSLEKRGNLWILTLNGDDENRLNPXXXXXXXXXXXXXXXXXXPGSVLITTAKGKFFSNGFDLQWARAADSKSAAMDRLQFMVDSLKPVAAAFLSLPMPTIAAVNGHASAAGFMLAIFHDYVLMRSDRGVLYMPEVNLGLPLPDYFAAVMREKIKSPVVLRD 530 MC+LEKRG+L+ LTL GDDE+R +P GSVLITT G FFSNGFDL WA++A + A++R+ MV S KPV AA L LPMPTIAA+NGHA+A+G M A+ HDYV MR DRGVLYM EV++GLP+PDYF+A++ K+ S + R+ Sbjct: 1 MCTLEKRGDLFHLTLTGDDEHRFHPDTIASVLSLLEQAKSQSTKGSVLITTGHGNFFSNGFDLAWAQSA--RHGAIERMHQMVKSFKPVLAALLDLPMPTIAALNGHAAASGLMFALSHDYVFMRKDRGVLYMSEVDIGLPVPDYFSALVVAKVGSGIARRE 160 HSP 2 Score: 25.7942 bits (55), Expect = 9.665e-44 Identity = 11/15 (73.33%), Postives = 13/15 (86.67%), Query Frame = 1 Query: 550 KLKGNEAVKIGIVDS 594 KLKG +AV +GIVDS Sbjct: 167 KLKGEDAVALGIVDS 181
BLAST of GR393921 vs. TrEMBL
Match: A5B6A9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036844 PE=4 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.633e-43 Identity = 90/162 (55.56%), Postives = 111/162 (68.52%), Query Frame = 3 Query: 45 MCSLEKRGNLWILTLNGDDENRLNPXXXXXXXXXXXXXXXXXXPGSVLITTAKGKFFSNGFDLQWARAADSKSAAMDRLQFMVDSLKPVAAAFLSLPMPTIAAVNGHASAAGFMLAIFHDYVLMRSDRGVLYMPEVNLGLPLPDYFAAVMREKIKSPVVLRD 530 MC+LE+RGNL++L L GD+E+RL P PGS LITTA KFFSNG DL WA+AA S S DRL +V++ KP+ A LSLPMPTIAAV+GHA+AAGF LAI HDYVLM++DR VLYM E+++GL DYF A+++ KI P RD Sbjct: 1 MCTLEERGNLFLLILTGDNEHRLGPTLVDSIRSALAQVKSQATPGSALITTAHDKFFSNGLDLPWAQAAGS-SGFRDRLNHLVNNFKPIIADLLSLPMPTIAAVSGHAAAAGFRLAISHDYVLMKNDRSVLYMSELDIGLTFADYFMAMLKSKISDPAARRD 161 HSP 2 Score: 24.6386 bits (52), Expect = 3.633e-43 Identity = 12/19 (63.16%), Postives = 15/19 (78.95%), Query Frame = 1 Query: 538 LVA*KLKGNEAVKIGIVDS 594 L A K+K EAV++GIVDS Sbjct: 164 LRAKKVKAEEAVRMGIVDS 182
BLAST of GR393921 vs. TrEMBL
Match: A5AMX1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029254 PE=4 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.610e-38 Identity = 83/157 (52.87%), Postives = 107/157 (68.15%), Query Frame = 3 Query: 45 MCSLEKRGNLWILTLNGDDENRLNPXXXXXXXXXXXXXXXXXXPGSVLITTAKGKFFSNGFDLQWARAADSKSAAMDRLQFMVDSLKPVAAAFLSLPMPTIAAVNGHASAAGFMLAIFHDYVLMRSDRGVLYMPEVNLGLPLPDYFAAVMREKIKSP 515 MCSLEKRGN++ILTL G E+RLNP S LITTA+GKFFSNG+DL WA A S +DR++ M L+ + A LSLPMPTIAA++GH SAA +LA+ HDYVLMR+DRG +YM E+++GL +PD+F A++R KI +P Sbjct: 1 MCSLEKRGNIFILTLTGPGEHRLNPTLLDAISAALSRVRAESSMSSALITTAEGKFFSNGYDLAWASA--SGGVFLDRVKLMSSKLRSLVADLLSLPMPTIAAISGHCSAAAAILALSHDYVLMRNDRGFIYMSELDIGLKIPDWFVALIRSKIGAP 155
BLAST of GR393921 vs. TAIR peptide
Match: AT4G14430.1 (| Symbols: IBR10, ATECI2, ECI2, ECHIB, PEC12 | indole-3-butyric acid response 10 | chr4:8304910-8305632 REVERSE LENGTH=240) HSP 1 Score: 187.193 bits (474), Expect = 7.262e-49 Identity = 93/162 (57.41%), Postives = 116/162 (71.60%), Query Frame = 3 Query: 45 MCSLEKRGNLWILTLNGDDENRLNPXXXXXXXXXXXXXXXXXXPGSVLITTAKGKFFSNGFDLQWARAADSKSAAMDRLQFMVDSLKPVAAAFLSLPMPTIAAVNGHASAAGFMLAIFHDYVLMRSDRGVLYMPEVNLGLPLPDYFAAVMREKIKSPVVLRD 530 MC+LEKRG+L++LTL GD E+R +P GS+LITTA GKFFSNGFDL WA+ A SK+ A +RL MV+S KPV AA L LPMPTIAA+NGHA+AAG +LA+ HDYV MR DRGVLYM EV++GL +PDYF+A++R KI + R+ Sbjct: 1 MCTLEKRGDLFLLTLTGDGEHRFHPDTIATILSLLEQAKSQSTRGSILITTANGKFFSNGFDLAWAQTAGSKTGAANRLHQMVESFKPVVAALLDLPMPTIAALNGHAAAAGLILALSHDYVFMRKDRGVLYMSEVDIGLSMPDYFSALVRAKIGTSAARRE 162 HSP 2 Score: 24.6386 bits (52), Expect = 7.262e-49 Identity = 10/15 (66.67%), Postives = 13/15 (86.67%), Query Frame = 1 Query: 550 KLKGNEAVKIGIVDS 594 K++G EAV +GIVDS Sbjct: 169 KIRGEEAVGLGIVDS 183
BLAST of GR393921 vs. TAIR peptide
Match: AT4G14440.1 (| Symbols: ATECI3, ECI3, HCD1 | 3-hydroxyacyl-CoA dehydratase 1 | chr4:8306946-8307662 REVERSE LENGTH=238) HSP 1 Score: 176.022 bits (445), Expect = 3.213e-46 Identity = 89/162 (54.94%), Postives = 113/162 (69.75%), Query Frame = 3 Query: 45 MCSLEKRGNLWILTLNGDDENRLNPXXXXXXXXXXXXXXXXXXPGSVLITTAKGKFFSNGFDLQWARAADSKSAAMDRLQFMVDSLKPVAAAFLSLPMPTIAAVNGHASAAGFMLAIFHDYVLMRSDRGVLYMPEVNLGLPLPDYFAAVMREKIKSPVVLRD 530 MC+LEKRG+L++LTL G+DE+R +P GSVLITT GKFFSNGFDL WA++A A+ R+ MV S KPV AA L LPMPTIAA+NGHA+A+G M A+ HDYV MR DRGVLYM EV++GLP+PDYF+A++ K+ S + R+ Sbjct: 1 MCTLEKRGDLFLLTLTGEDEHRFHPDTIASVLSLLEQAKSQSTKGSVLITTGHGKFFSNGFDLAWAQSAGH--GAIKRMHQMVKSFKPVLAALLDLPMPTIAALNGHAAASGLMFALSHDYVFMRKDRGVLYMSEVDIGLPVPDYFSALVVAKVGSGIARRE 160 HSP 2 Score: 26.9498 bits (58), Expect = 3.213e-46 Identity = 12/15 (80.00%), Postives = 13/15 (86.67%), Query Frame = 1 Query: 550 KLKGNEAVKIGIVDS 594 KLKG EAV +GIVDS Sbjct: 167 KLKGEEAVALGIVDS 181
BLAST of GR393921 vs. TAIR peptide
Match: AT1G65520.1 (| Symbols: ATECI1, ECI1, ECHIC, PEC11 | delta(3), delta(2)-enoyl CoA isomerase 1 | chr1:24361171-24361893 REVERSE LENGTH=240) HSP 1 Score: 144.436 bits (363), Expect = 4.384e-35 Identity = 85/163 (52.15%), Postives = 101/163 (61.96%), Query Frame = 3 Query: 45 MCSLEKRGNLWILTLNGDDENRLNPXXXXXXXXXXXXXXXXXX-PGSVLITTAKGKFFSNGFDLQWARAADSKSAAMDRLQFMVDSLKPVAAAFLSLPMPTIAAVNGHASAAGFMLAIFHDYVLMRSDRGVLYMPEVNLGLPLPDYFAAVMREKIKSPVVLRD 530 MCSLEKR L+IL L GD E+RLNP SVLITT+ GKFFSNG+DL A + S S MD L+ + A +SLPMPTIAAV GHASAAG +LA+ HDYVLMR DRG LYM E+++ L +P +F AV+R KI SP RD Sbjct: 1 MCSLEKRDRLFILKLTGDGEHRLNPTLLDSLRSTINQIRSDPSFSQSVLITTSDGKFFSNGYDLALAESNPSLSVVMDA------KLRSLVADLISLPMPTIAAVTGHASAAGCILAMSHDYVLMRRDRGFLYMSELDIELIVPAWFMAVIRGKIGSPAARRD 157 The following BLAST results are available for this feature:
BLAST of GR393921 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 1
BLAST of GR393921 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR393921 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 3
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR393921 ID=GR393921; Name=GR393921; organism=Cicer arietinum; type=EST; length=609bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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