GR395224
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR395224 vs. TrEMBL
Match: B9RIJ0_RICCO (Receptor serine/threonine kinase, putative OS=Ricinus communis GN=RCOM_1579660 PE=4 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.776e-10 Identity = 52/168 (30.95%), Postives = 76/168 (45.24%), Query Frame = 2 Query: 14 CLSKQFLKLLQSPISITPFQFESSDHNDSFTFLHCSS-----------LFCPV------YIEYSDNRLLDQSFDLIHCTKILDISSSVF-LREGENDLVLKWSKPNCRKCEIKGKMCKLNNNGAEDEIECFD--RHHKST---KKILYLPQRIINFPNLQESVRSNNK 448 CLSK L +S +PFQF + D FT CS L C I + R ++ L+ CTK+ ++SS + E ++ KWS PNCRKCE +GK+C+LN + E EC + + HK L L + +F L ++ + N K Sbjct: 103 CLSKHLRNL---NLSASPFQF-GDKYLDDFTVFSCSIGEFVSWSEGYILSCVNNSPDRGIIAFYSRRSINYMPSLLSCTKLYNVSSVPHNMLFPERKIIFKWSTPNCRKCEAEGKLCRLNETSLQSETECLNILKQHKGAVLGSFFLGLVIAVYHFYRLDKTEKENQK 266
BLAST of GR395224 vs. TrEMBL
Match: B9RIJ5_RICCO (Ubiquitin-protein ligase, putative OS=Ricinus communis GN=RCOM_1579710 PE=4 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 9.747e-9 Identity = 48/128 (37.50%), Postives = 63/128 (49.22%), Query Frame = 2 Query: 14 CLSKQFLKLLQSPISITPFQFESSDHNDSFTFLHCSS-----------LFCPVYIEYSDNRLLDQSFD-LIHCTKILDISS-SVFLREGENDLVLKWSKPNCRKCEIKGKMCKLNNNGAEDEIECFDR 358 CL + L S +S +PFQF + F F +C+S L P Y Y+ SF L HCTK+ +ISS S + +G N L L WSKP C CE +GK C+L N E EC+D+ Sbjct: 93 CLPRHLLNFSFS-LSTSPFQFMDESRYNVF-FFNCTSMDREMLLQMRCLSSPGYDIYAFTSDYPLSFVYLAHCTKMFNISSISNEMIDGANFLRLNWSKPECGFCESQGKFCRLKKNSTY-ETECYDK 217
BLAST of GR395224 vs. TrEMBL
Match: D7U6Q0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_294.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00005786001 PE=4 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 2.171e-8 Identity = 47/134 (35.07%), Postives = 60/134 (44.78%), Query Frame = 2 Query: 14 CLSKQFLKLLQSPISITPFQFESSDHNDSFTFLHCS--------SLFC------PVYIEYSDNRLLDQSFDLIHCTKILDISSSVF-LREGENDLVLKWSKPNCRKCEIKGKMC-KLNNNGAEDEIECFDRHHK 367 CL +Q L +S +PFQF D F+F +CS S+ C PVY+ S L +L C KI + + + GE D + WSKP C CE KG C + NN E EIEC D K Sbjct: 123 CLQRQILNF---NLSASPFQFTGD--TDDFSFFNCSENKTYELSSIPCNFLSSNPVYVTSSFRSLA--KVNLSSCRKIFNPTLPYYHTYGGEYDTFMNWSKPMCGNCEAKGNKCQRKKNNSTEPEIECIDEPAK 249
BLAST of GR395224 vs. TrEMBL
Match: A5BEV6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024237 PE=4 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 2.171e-8 Identity = 47/134 (35.07%), Postives = 60/134 (44.78%), Query Frame = 2 Query: 14 CLSKQFLKLLQSPISITPFQFESSDHNDSFTFLHCS--------SLFC------PVYIEYSDNRLLDQSFDLIHCTKILDISSSVF-LREGENDLVLKWSKPNCRKCEIKGKMC-KLNNNGAEDEIECFDRHHK 367 CL +Q L +S +PFQF D F+F +CS S+ C PVY+ S L +L C KI + + + GE D + WSKP C CE KG C + NN E EIEC D K Sbjct: 97 CLQRQILNF---NLSASPFQFTGD--TDDFSFFNCSENKTYELSSIPCNFLSSNPVYVTSSFRSLA--KVNLSSCRKIFNPTLPYYHTYGGEYDTFMNWSKPMCGNCEXKGNKCQRKKNNSTEPEIECIDEPAK 223
BLAST of GR395224 vs. TrEMBL
Match: D7TYJ5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_148.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00001021001 PE=4 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 9.123e-7 Identity = 45/137 (32.85%), Postives = 63/137 (45.99%), Query Frame = 2 Query: 14 CLSKQFLKLLQSPISITPFQFE--SSDHNDSFTFLHCS---------------SLFC------PVYIEYSDNRLLDQSFDLIHCTKILDIS-SSVFLREGENDLVLKWSKPNCRKCEIKGKMCKL-NNNGAEDEIEC 349 CL Q L +S +PF F+ S +FTF +CS S C P+Y S L D D+ C +I ++S + ++ EGEN L LKW + C CE +GK C+L +NG + E EC Sbjct: 27 CLQSQLQNLR---LSASPFHFKLNHSFELQAFTFFNCSANRSDSSYFKSIKSFSKSCSFLPGNPLYAVDSSTSLTD--LDVSSCRRIYNLSLPTYYIYEGENRLYLKWEESICGNCEAEGKKCRLKKSNGKKPETEC 158
BLAST of GR395224 vs. TrEMBL
Match: B9SUU6_RICCO (Receptor serine/threonine kinase, putative OS=Ricinus communis GN=RCOM_0574930 PE=4 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 9.123e-7 Identity = 46/133 (34.59%), Postives = 64/133 (48.12%), Query Frame = 2 Query: 8 EYCLSKQFLKLLQSPISITPFQFESSDHN-DSFTFLHCS----------SLFCP---VYIEYSDNRLLDQSFDLIHCTKILDIS---SSVFLREGENDLVLK--WSKPNCRKCEIKGKMCKLNNNGAEDEIEC 349 E CL +Q L +S +PFQ+ D N S +C+ L P VYI S R+ S DL++CTK+ D+S + +F ND VL+ W P+C C I+GK C+L N + E EC Sbjct: 110 ENCLPRQLSNL---NLSASPFQYLELDQNTQSHVLFNCTWRKNPFFQVPCLSAPNYQVYIFSSTIRI--DSPDLMYCTKMYDVSLPENMIF----SNDYVLQLTWFNPSCGSCAIQGKYCRLKANNTQPETEC 233 The following BLAST results are available for this feature:
BLAST of GR395224 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 6
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR395224 ID=GR395224; Name=GR395224; organism=Cicer arietinum; type=EST; length=671bpback to top |