GR395224

EST Overview
NameGR395224
Unique NameGR395224
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length671
Libraries
Library NameType
LIBEST_024780 ICC1882 PEG induced drought cDNA librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR395224 vs. TrEMBL
Match: B9RIJ0_RICCO (Receptor serine/threonine kinase, putative OS=Ricinus communis GN=RCOM_1579660 PE=4 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.776e-10
Identity = 52/168 (30.95%), Postives = 76/168 (45.24%), Query Frame = 2
Query:   14 CLSKQFLKLLQSPISITPFQFESSDHNDSFTFLHCSS-----------LFCPV------YIEYSDNRLLDQSFDLIHCTKILDISSSVF-LREGENDLVLKWSKPNCRKCEIKGKMCKLNNNGAEDEIECFD--RHHKST---KKILYLPQRIINFPNLQESVRSNNK 448
            CLSK    L    +S +PFQF    + D FT   CS            L C         I +   R ++    L+ CTK+ ++SS    +   E  ++ KWS PNCRKCE +GK+C+LN    + E EC +  + HK        L L   + +F  L ++ + N K
Sbjct:  103 CLSKHLRNL---NLSASPFQF-GDKYLDDFTVFSCSIGEFVSWSEGYILSCVNNSPDRGIIAFYSRRSINYMPSLLSCTKLYNVSSVPHNMLFPERKIIFKWSTPNCRKCEAEGKLCRLNETSLQSETECLNILKQHKGAVLGSFFLGLVIAVYHFYRLDKTEKENQK 266          
BLAST of GR395224 vs. TrEMBL
Match: B9RIJ5_RICCO (Ubiquitin-protein ligase, putative OS=Ricinus communis GN=RCOM_1579710 PE=4 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 9.747e-9
Identity = 48/128 (37.50%), Postives = 63/128 (49.22%), Query Frame = 2
Query:   14 CLSKQFLKLLQSPISITPFQFESSDHNDSFTFLHCSS-----------LFCPVYIEYSDNRLLDQSFD-LIHCTKILDISS-SVFLREGENDLVLKWSKPNCRKCEIKGKMCKLNNNGAEDEIECFDR 358
            CL +  L    S +S +PFQF      + F F +C+S           L  P Y  Y+       SF  L HCTK+ +ISS S  + +G N L L WSKP C  CE +GK C+L  N    E EC+D+
Sbjct:   93 CLPRHLLNFSFS-LSTSPFQFMDESRYNVF-FFNCTSMDREMLLQMRCLSSPGYDIYAFTSDYPLSFVYLAHCTKMFNISSISNEMIDGANFLRLNWSKPECGFCESQGKFCRLKKNSTY-ETECYDK 217          
BLAST of GR395224 vs. TrEMBL
Match: D7U6Q0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_294.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00005786001 PE=4 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 2.171e-8
Identity = 47/134 (35.07%), Postives = 60/134 (44.78%), Query Frame = 2
Query:   14 CLSKQFLKLLQSPISITPFQFESSDHNDSFTFLHCS--------SLFC------PVYIEYSDNRLLDQSFDLIHCTKILDISSSVF-LREGENDLVLKWSKPNCRKCEIKGKMC-KLNNNGAEDEIECFDRHHK 367
            CL +Q L      +S +PFQF      D F+F +CS        S+ C      PVY+  S   L     +L  C KI + +   +    GE D  + WSKP C  CE KG  C +  NN  E EIEC D   K
Sbjct:  123 CLQRQILNF---NLSASPFQFTGD--TDDFSFFNCSENKTYELSSIPCNFLSSNPVYVTSSFRSLA--KVNLSSCRKIFNPTLPYYHTYGGEYDTFMNWSKPMCGNCEAKGNKCQRKKNNSTEPEIECIDEPAK 249          
BLAST of GR395224 vs. TrEMBL
Match: A5BEV6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024237 PE=4 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 2.171e-8
Identity = 47/134 (35.07%), Postives = 60/134 (44.78%), Query Frame = 2
Query:   14 CLSKQFLKLLQSPISITPFQFESSDHNDSFTFLHCS--------SLFC------PVYIEYSDNRLLDQSFDLIHCTKILDISSSVF-LREGENDLVLKWSKPNCRKCEIKGKMC-KLNNNGAEDEIECFDRHHK 367
            CL +Q L      +S +PFQF      D F+F +CS        S+ C      PVY+  S   L     +L  C KI + +   +    GE D  + WSKP C  CE KG  C +  NN  E EIEC D   K
Sbjct:   97 CLQRQILNF---NLSASPFQFTGD--TDDFSFFNCSENKTYELSSIPCNFLSSNPVYVTSSFRSLA--KVNLSSCRKIFNPTLPYYHTYGGEYDTFMNWSKPMCGNCEXKGNKCQRKKNNSTEPEIECIDEPAK 223          
BLAST of GR395224 vs. TrEMBL
Match: D7TYJ5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_148.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00001021001 PE=4 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 9.123e-7
Identity = 45/137 (32.85%), Postives = 63/137 (45.99%), Query Frame = 2
Query:   14 CLSKQFLKLLQSPISITPFQFE--SSDHNDSFTFLHCS---------------SLFC------PVYIEYSDNRLLDQSFDLIHCTKILDIS-SSVFLREGENDLVLKWSKPNCRKCEIKGKMCKL-NNNGAEDEIEC 349
            CL  Q   L    +S +PF F+   S    +FTF +CS               S  C      P+Y   S   L D   D+  C +I ++S  + ++ EGEN L LKW +  C  CE +GK C+L  +NG + E EC
Sbjct:   27 CLQSQLQNLR---LSASPFHFKLNHSFELQAFTFFNCSANRSDSSYFKSIKSFSKSCSFLPGNPLYAVDSSTSLTD--LDVSSCRRIYNLSLPTYYIYEGENRLYLKWEESICGNCEAEGKKCRLKKSNGKKPETEC 158          
BLAST of GR395224 vs. TrEMBL
Match: B9SUU6_RICCO (Receptor serine/threonine kinase, putative OS=Ricinus communis GN=RCOM_0574930 PE=4 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 9.123e-7
Identity = 46/133 (34.59%), Postives = 64/133 (48.12%), Query Frame = 2
Query:    8 EYCLSKQFLKLLQSPISITPFQFESSDHN-DSFTFLHCS----------SLFCP---VYIEYSDNRLLDQSFDLIHCTKILDIS---SSVFLREGENDLVLK--WSKPNCRKCEIKGKMCKLNNNGAEDEIEC 349
            E CL +Q   L    +S +PFQ+   D N  S    +C+           L  P   VYI  S  R+   S DL++CTK+ D+S   + +F     ND VL+  W  P+C  C I+GK C+L  N  + E EC
Sbjct:  110 ENCLPRQLSNL---NLSASPFQYLELDQNTQSHVLFNCTWRKNPFFQVPCLSAPNYQVYIFSSTIRI--DSPDLMYCTKMYDVSLPENMIF----SNDYVLQLTWFNPSCGSCAIQGKYCRLKANNTQPETEC 233          
The following BLAST results are available for this feature:
BLAST of GR395224 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 6
Match NameE-valueIdentityDescription
B9RIJ0_RICCO1.776e-1030.95Receptor serine/threonine kinase, putative OS=Rici... [more]
B9RIJ5_RICCO9.747e-937.50Ubiquitin-protein ligase, putative OS=Ricinus comm... [more]
D7U6Q0_VITVI2.171e-835.07Whole genome shotgun sequence of line PN40024, sca... [more]
A5BEV6_VITVI2.171e-835.07Putative uncharacterized protein OS=Vitis vinifera... [more]
D7TYJ5_VITVI9.123e-732.85Whole genome shotgun sequence of line PN40024, sca... [more]
B9SUU6_RICCO9.123e-734.59Receptor serine/threonine kinase, putative OS=Rici... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 32..46
score
NoneNo IPR availableSEGsegsegcoord: 2..16
score
NoneNo IPR availableSEGsegsegcoord: 1..12
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR395224 ID=GR395224; Name=GR395224; organism=Cicer arietinum; type=EST; length=671bp
GCGGGGGGAATATTGCCTTTCAAAACAGTTTTTAAAGCTCCTTCAATCAC
CTATTAGTATTACTCCTTTTCAATTTGAGTCATCCGACCATAATGATAGC
TTCACTTTCCTCCACTGTAGTTCACTTTTCTGCCCGGTTTATATTGAATA
TTCTGACAACAGACTCCTTGATCAGAGTTTTGACCTAATACACTGCACCA
AGATTTTAGATATTTCTTCGTCAGTGTTCTTGCGGGAAGGTGAGAATGAT
TTGGTTTTGAAATGGTCGAAACCCAATTGTAGAAAGTGCGAAATAAAAGG
AAAGATGTGTAAACTGAACAATAACGGAGCTGAAGATGAAATAGAATGTT
TTGACCGTCATCACAAATCAACAAAGAAGATACTTTACTTGCCGCAGCGG
ATAATCAATTTCCCAAACTTGCAAGAATCTGTGAGGAGCAACAACAAATA
ATCACAGCAACTAAAATCACTACCACAAAGGACACAATAATTTTTAACAT
GGAAAAACCTTCTCAATATGAGAAGTAAACAACCACGGGACCAAGCCAGT
AATAGAGCTCCATTATGATCAAAATATGGGTACAAGAGAAGTTAAAATAT
GACACAAATTCGTGCTCAGTAACCCGCCAAAAACAGCAAGGTAACCCCAC
ACACAATCAGCCAAAACNNAN
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