GR397459

EST Overview


Name	GR397459
Unique Name	GR397459
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	504

Libraries


Library Name	Type
LIBEST_024782 ICC4958 field drought stressed root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR397459 vs. TrEMBL
Match: C6TB49_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.168e-19
Identity = 50/52 (96.15%), Postives = 52/52 (100.00%), Query Frame = 3

Query:    3 KEKEYKDALEAFNEKNREKVQLITKLMELVSESEKLRMKKLEELSKNIDSMQ 158
            KEKEYKDALEAFNEKNREKVQLITKLMELVSESE+LRMKKLEELSKNIDS+Q
Sbjct:  113 KEKEYKDALEAFNEKNREKVQLITKLMELVSESERLRMKKLEELSKNIDSIQ 164

[Close]

BLAST of GR397459 vs. TrEMBL
Match: C6T313_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.168e-19
Identity = 50/52 (96.15%), Postives = 52/52 (100.00%), Query Frame = 3

Query:    3 KEKEYKDALEAFNEKNREKVQLITKLMELVSESEKLRMKKLEELSKNIDSMQ 158
            KEKEYKDALEAFNEKNREKVQLITKLMELVSESE+LRMKKLEELSKNIDS+Q
Sbjct:  116 KEKEYKDALEAFNEKNREKVQLITKLMELVSESERLRMKKLEELSKNIDSIQ 167

[Close]

BLAST of GR397459 vs. TrEMBL
Match: C6SY78_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.168e-19
Identity = 50/52 (96.15%), Postives = 51/52 (98.08%), Query Frame = 3

Query:    3 KEKEYKDALEAFNEKNREKVQLITKLMELVSESEKLRMKKLEELSKNIDSMQ 158
            KEKEYKDALEAFNEKNREKVQLITKLMELV ESE+LRMKKLEELSKNIDSMQ
Sbjct:  113 KEKEYKDALEAFNEKNREKVQLITKLMELVGESERLRMKKLEELSKNIDSMQ 164

[Close]

BLAST of GR397459 vs. TrEMBL
Match: B9MTP6_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_282470 PE=4 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.130e-18
Identity = 47/51 (92.16%), Postives = 51/51 (100.00%), Query Frame = 3

Query:    3 KEKEYKDALEAFNEKNREKVQLITKLMELVSESEKLRMKKLEELSKNIDSM 155
            KEKEYKDALEAFN+KN+EKVQLITKLMELVSESE+LR+KKLEELSKNIDSM
Sbjct:  105 KEKEYKDALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDSM 155

[Close]

BLAST of GR397459 vs. TrEMBL
Match: D7TJ33_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00033798001 PE=4 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.088e-18
Identity = 47/51 (92.16%), Postives = 51/51 (100.00%), Query Frame = 3

Query:    3 KEKEYKDALEAFNEKNREKVQLITKLMELVSESEKLRMKKLEELSKNIDSM 155
            KEKEYKDALEA+NEKN+EKVQLI+KLMELVSESE+LRMKKLEELSKNIDSM
Sbjct:   83 KEKEYKDALEAYNEKNKEKVQLISKLMELVSESERLRMKKLEELSKNIDSM 133

[Close]

BLAST of GR397459 vs. TrEMBL
Match: D7SN42_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_61.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00031383001 PE=4 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.553e-17
Identity = 45/52 (86.54%), Postives = 51/52 (98.08%), Query Frame = 3

Query:    3 KEKEYKDALEAFNEKNREKVQLITKLMELVSESEKLRMKKLEELSKNIDSMQ 158
            KEKEYK+ALEAFNEKN+EK QL+TKLMELVSESE+LRMKKLEELSKNI+S+Q
Sbjct:  121 KEKEYKEALEAFNEKNKEKAQLVTKLMELVSESERLRMKKLEELSKNIESIQ 172

[Close]

BLAST of GR397459 vs. TrEMBL
Match: Q8RXZ8_ARATH (At3g09980 OS=Arabidopsis thaliana GN=At3g09980 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.650e-17
Identity = 45/51 (88.24%), Postives = 50/51 (98.04%), Query Frame = 3

Query:    3 KEKEYKDALEAFNEKNREKVQLITKLMELVSESEKLRMKKLEELSKNIDSM 155
            KE+EYK+ALEAFNEKNREKVQLIT+LMELV ESEK+RMKKLEELSKNIDS+
Sbjct:  127 KEREYKEALEAFNEKNREKVQLITRLMELVGESEKMRMKKLEELSKNIDSI 177

[Close]

BLAST of GR397459 vs. TrEMBL
Match: D7L8F1_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_478325 PE=4 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.650e-17
Identity = 45/51 (88.24%), Postives = 50/51 (98.04%), Query Frame = 3

Query:    3 KEKEYKDALEAFNEKNREKVQLITKLMELVSESEKLRMKKLEELSKNIDSM 155
            KE+EYK+ALEAFNEKNREKVQLIT+LMELV ESEK+RMKKLEELSKNIDS+
Sbjct:  127 KEREYKEALEAFNEKNREKVQLITRLMELVGESEKMRMKKLEELSKNIDSI 177

[Close]

BLAST of GR397459 vs. TrEMBL
Match: A9PGS8_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.315e-16
Identity = 47/54 (87.04%), Postives = 51/54 (94.44%), Query Frame = 3

Query:    3 KEKEYKDALEAFNEKNREKVQLITKLME---LVSESEKLRMKKLEELSKNIDSM 155
            KEKEYKDALEAFN+KN+EKVQLITKLME   LVSESE+LR+KKLEELSKNIDSM
Sbjct:   90 KEKEYKDALEAFNDKNKEKVQLITKLMEFEQLVSESERLRLKKLEELSKNIDSM 143

[Close]

BLAST of GR397459 vs. TrEMBL
Match: A9PC95_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.315e-16
Identity = 47/54 (87.04%), Postives = 51/54 (94.44%), Query Frame = 3

Query:    3 KEKEYKDALEAFNEKNREKVQLITKLME---LVSESEKLRMKKLEELSKNIDSM 155
            KEKEYKDALEAFN+KN+EKVQLITKLME   LVSESE+LR+KKLEELSKNIDSM
Sbjct:  117 KEKEYKDALEAFNDKNKEKVQLITKLMEFEQLVSESERLRLKKLEELSKNIDSM 170

[Close]

BLAST of GR397459 vs. TAIR peptide
Match: AT3G09980.1 (| Symbols: | Family of unknown function (DUF662) | chr3:3069358-3071145 FORWARD LENGTH=178)

HSP 1 Score: 91.6633 bits (226), Expect = 2.347e-19
Identity = 45/51 (88.24%), Postives = 50/51 (98.04%), Query Frame = 3

Query:    3 KEKEYKDALEAFNEKNREKVQLITKLMELVSESEKLRMKKLEELSKNIDSM 155
            KE+EYK+ALEAFNEKNREKVQLIT+LMELV ESEK+RMKKLEELSKNIDS+
Sbjct:  127 KEREYKEALEAFNEKNREKVQLITRLMELVGESEKMRMKKLEELSKNIDSI 177

[Close]

BLAST of GR397459 vs. TAIR peptide
Match: AT3G52920.2 (| Symbols: | Family of unknown function (DUF662) | chr3:19624601-19625981 FORWARD LENGTH=177)

HSP 1 Score: 83.9593 bits (206), Expect = 4.893e-17
Identity = 40/50 (80.00%), Postives = 48/50 (96.00%), Query Frame = 3

Query:    3 KEKEYKDALEAFNEKNREKVQLITKLMELVSESEKLRMKKLEELSKNIDS 152
            KE+EYK+AL+ FNEKNREKVQLITKLMELV ESEKLR+KKL+ELS++ID+
Sbjct:  113 KEREYKEALDTFNEKNREKVQLITKLMELVGESEKLRLKKLDELSRSIDT 162

[Close]

BLAST of GR397459 vs. TAIR peptide
Match: AT2G36410.2 (| Symbols: | Family of unknown function (DUF662) | chr2:15279041-15280270 FORWARD LENGTH=192)

HSP 1 Score: 83.1889 bits (204), Expect = 8.347e-17
Identity = 41/51 (80.39%), Postives = 48/51 (94.12%), Query Frame = 3

Query:    3 KEKEYKDALEAFNEKNREKVQLITKLMELVSESEKLRMKKLEELSKNIDSM 155
            KE+EYK+AL+ FNEKNREKVQLITKLMELV ESEKLRM KLEELSK+I+++
Sbjct:  142 KEREYKEALDTFNEKNREKVQLITKLMELVGESEKLRMIKLEELSKSIETV 192

[Close]

BLAST of GR397459 vs. TAIR peptide
Match: AT5G03660.1 (| Symbols: | Family of unknown function (DUF662) | chr5:938068-939811 FORWARD LENGTH=173)

HSP 1 Score: 82.0333 bits (201), Expect = 1.859e-16
Identity = 41/49 (83.67%), Postives = 43/49 (87.76%), Query Frame = 3

Query:    3 KEKEYKDALEAFNEKNREKVQLITKLMELVSESEKLRMKKLEELSKNID 149
            KE EYKDALEAFNEKN+EKV+LITKL EL  ESEK R KKLEELSKNID
Sbjct:  121 KETEYKDALEAFNEKNKEKVELITKLQELEGESEKFRFKKLEELSKNID 169

[Close]

BLAST of GR397459 vs. TAIR peptide
Match: AT5G03660.2 (| Symbols: | Family of unknown function (DUF662) | chr5:938068-939811 FORWARD LENGTH=151)

HSP 1 Score: 80.1073 bits (196), Expect = 7.066e-16
Identity = 40/48 (83.33%), Postives = 42/48 (87.50%), Query Frame = 3

Query:    6 EKEYKDALEAFNEKNREKVQLITKLMELVSESEKLRMKKLEELSKNID 149
            E EYKDALEAFNEKN+EKV+LITKL EL  ESEK R KKLEELSKNID
Sbjct:  100 ETEYKDALEAFNEKNKEKVELITKLQELEGESEKFRFKKLEELSKNID 147

[Close]

BLAST of GR397459 vs. TAIR peptide
Match: AT2G36410.3 (| Symbols: | Family of unknown function (DUF662) | chr2:15279041-15280270 FORWARD LENGTH=192)

HSP 1 Score: 79.337 bits (194), Expect = 1.205e-15
Identity = 40/51 (78.43%), Postives = 46/51 (90.20%), Query Frame = 3

Query:    3 KEKEYKDALEAFNEKNREKVQLITKLMELVSESEKLRMKKLEELSKNIDSM 155
            K  EYK+AL+ FNEKNREKVQLITKLMELV ESEKLRM KLEELSK+I+++
Sbjct:  142 KVMEYKEALDTFNEKNREKVQLITKLMELVGESEKLRMIKLEELSKSIETV 192

[Close]

BLAST of GR397459 vs. TAIR peptide
Match: AT3G52920.1 (| Symbols: | Family of unknown function (DUF662) | chr3:19624601-19625981 FORWARD LENGTH=180)

HSP 1 Score: 78.5666 bits (192), Expect = 2.056e-15
Identity = 40/53 (75.47%), Postives = 48/53 (90.57%), Query Frame = 3

Query:    3 KEKEYKDALEAFNEKNREKVQLITKLME---LVSESEKLRMKKLEELSKNIDS 152
            KE+EYK+AL+ FNEKNREKVQLITKLME   LV ESEKLR+KKL+ELS++ID+
Sbjct:  113 KEREYKEALDTFNEKNREKVQLITKLMEMGQLVGESEKLRLKKLDELSRSIDT 165

[Close]

BLAST of GR397459 vs. TAIR peptide
Match: AT2G36410.1 (| Symbols: | Family of unknown function (DUF662) | chr2:15279041-15280270 FORWARD LENGTH=195)

HSP 1 Score: 77.7962 bits (190), Expect = 3.507e-15
Identity = 41/54 (75.93%), Postives = 48/54 (88.89%), Query Frame = 3

Query:    3 KEKEYKDALEAFNEKNREKVQLITKLME---LVSESEKLRMKKLEELSKNIDSM 155
            KE+EYK+AL+ FNEKNREKVQLITKLME   LV ESEKLRM KLEELSK+I+++
Sbjct:  142 KEREYKEALDTFNEKNREKVQLITKLMEMEQLVGESEKLRMIKLEELSKSIETV 195

[Close]

BLAST of GR397459 vs. TAIR peptide
Match: AT3G52900.1 (| Symbols: | Family of unknown function (DUF662) | chr3:19613134-19613852 FORWARD LENGTH=164)

HSP 1 Score: 76.2554 bits (186), Expect = 1.020e-14
Identity = 34/52 (65.38%), Postives = 46/52 (88.46%), Query Frame = 3

Query:    3 KEKEYKDALEAFNEKNREKVQLITKLMELVSESEKLRMKKLEELSKNIDSMQ 158
            KEKEYKD LEAFNEKN+EK  L++ LMEL++ESE+LR+KKLEE++K + ++Q
Sbjct:  113 KEKEYKDTLEAFNEKNKEKAHLVSMLMELLAESERLRIKKLEEINKTVGTLQ 164

[Close]

BLAST of GR397459 vs. TAIR peptide
Match: AT2G27740.1 (| Symbols: | Family of unknown function (DUF662) | chr2:11822800-11823575 FORWARD LENGTH=174)

HSP 1 Score: 72.7886 bits (177), Expect = 1.128e-13
Identity = 34/49 (69.39%), Postives = 45/49 (91.84%), Query Frame = 3

Query:    3 KEKEYKDALEAFNEKNREKVQLITKLMELVSESEKLRMKKLEELSKNID 149
            KE+E+K+ALEA+NEKN+EK   ++KL+ELV+ESEKLRM KLEELSK+I+
Sbjct:  122 KEREFKEALEAYNEKNKEKAIFVSKLVELVTESEKLRMTKLEELSKSIE 170

The following BLAST results are available for this feature:

BLAST of GR397459 vs. TrEMBL
BLAST of GR397459 vs. TAIR peptide

BLAST of GR397459 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6TB49_SOYBN	2.168e-19	96.15	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6T313_SOYBN	2.168e-19	96.15	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6SY78_SOYBN	2.168e-19	96.15	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9MTP6_POPTR	3.130e-18	92.16	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
D7TJ33_VITVI	4.088e-18	92.16	Whole genome shotgun sequence of line PN40024, sca...	[more]
D7SN42_VITVI	1.553e-17	86.54	Whole genome shotgun sequence of line PN40024, sca...	[more]
Q8RXZ8_ARATH	2.650e-17	88.24	At3g09980 OS=Arabidopsis thaliana GN=At3g09980 PE=...	[more]
D7L8F1_ARALY	2.650e-17	88.24	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
A9PGS8_POPTR	1.315e-16	87.04	Putative uncharacterized protein OS=Populus tricho...	[more]
A9PC95_POPTR	1.315e-16	87.04	Putative uncharacterized protein OS=Populus tricho...	[more]

BLAST of GR397459 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT3G09980.1	2.347e-19	88.24	\| Symbols: \| Family of unknown function (DUF662) ...	[more]
AT3G52920.2	4.893e-17	80.00	\| Symbols: \| Family of unknown function (DUF662) ...	[more]
AT2G36410.2	8.347e-17	80.39	\| Symbols: \| Family of unknown function (DUF662) ...	[more]
AT5G03660.1	1.859e-16	83.67	\| Symbols: \| Family of unknown function (DUF662) ...	[more]
AT5G03660.2	7.066e-16	83.33	\| Symbols: \| Family of unknown function (DUF662) ...	[more]
AT2G36410.3	1.205e-15	78.43	\| Symbols: \| Family of unknown function (DUF662) ...	[more]
AT3G52920.1	2.056e-15	75.47	\| Symbols: \| Family of unknown function (DUF662) ...	[more]
AT2G36410.1	3.507e-15	75.93	\| Symbols: \| Family of unknown function (DUF662) ...	[more]
AT3G52900.1	1.020e-14	65.38	\| Symbols: \| Family of unknown function (DUF662) ...	[more]
AT2G27740.1	1.128e-13	69.39	\| Symbols: \| Family of unknown function (DUF662) ...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007033	Golgin, RAB6-interacting	PANTHER	PTHR21470	NTKL-BINDING PROTEIN 1	coord: 1..50 score: 6.1
IPR007033	Golgin, RAB6-interacting	PFAM	PF04949	DUF662	coord: 1..51 score: 1.4
None	No IPR available	SEG	seg	seg	coord: 21..43 score
None	No IPR available	SEG	seg	seg	coord: 55..66 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR397459 ID=GR397459; Name=GR397459; organism=Cicer arietinum; type=EST; length=504bp
AGAAGGAGAAAGAATACAAAGATGCCCTTGAAGCTTTTAATGAAAAGAAC
AGGGAAAAAGTACAGCTAATTACTAAATTAATGGAGCTGGTGAGCGAAAG
TGAAAAGTTGAGGATGAAGAAGCTGGAGGAGCTGAGTAAGAACATAGATT
CCATGCAAATGCAATGATTTAGCGAAACTGCTAGTGAATCTGATCTGATT
GATTAGTCTTGTGTGGTATATTAAAGATGACATAGTGTATTTATATATGT
ATGGGTGTCTTGTGATTGTGTAATTTTGTGGTGTTGTTAATGTTTGTTTT
AACTAGCATTTCATTTGATATAAGTGACATTAGCTAATTTAGGAGGGTTA
TATACCCTACTACAAACAGGCTTGTAACTAAATACGTTGATGCATTTTCT
TGTCATTTTTTTTTACCTTTTCCGATTCATTTTTCTCTGCTTTGTTCCTC
CCTATTTAATTTATTGATGTGTAAGTAATTTGAAATTGTTGCCACCAATT
TCTC

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
IPR007033	GORAB

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