GR401646

EST Overview


Name	GR401646
Unique Name	GR401646
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	396

Libraries


Library Name	Type
LIBEST_024785 ICCV2 Salinity-stressed chickpea root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR401646 vs. TrEMBL
Match: B9SQ96_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0238700 PE=4 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.096e-15
Identity = 38/46 (82.61%), Postives = 40/46 (86.96%), Query Frame = -3

Query:  251 MRCDINFEISSYGRSFNTLIGRTAHIEFLECDIFVKFIMWSFPELF 388
            MRCD+NF+ SSYGRSFN LIGR AHIEFLE DIF KFIMWSFPE F
Sbjct:  762 MRCDVNFDTSSYGRSFNALIGRAAHIEFLESDIFAKFIMWSFPEFF 807

[Close]

BLAST of GR401646 vs. TrEMBL
Match: B9R6R9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1584740 PE=4 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.441e-15
Identity = 37/49 (75.51%), Postives = 43/49 (87.76%), Query Frame = -3

Query:  248 VVMRCDINFEISSYGRSFNTLIGRTAHIEFLECDIFVKFIMWSFPELFR 394
            V MRCD+NF+ SSYG++FNT IGR AHIEFLE DI+V+FIMWSF ELFR
Sbjct:  714 VFMRCDVNFDTSSYGKNFNTFIGRAAHIEFLESDIYVRFIMWSFQELFR 762

[Close]

BLAST of GR401646 vs. TrEMBL
Match: B9IQD8_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_915297 PE=4 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.441e-15
Identity = 37/47 (78.72%), Postives = 41/47 (87.23%), Query Frame = -3

Query:  248 MRCDINFEISSYGRSFNTLIGRTAHIEFLECDIFVKFIMWSFPELFR 388
            MRCD+NF+ SSYGRS NT+IGR AHIEFLE D+F KFIMWSF ELFR
Sbjct:  732 MRCDVNFDTSSYGRSLNTIIGRAAHIEFLESDVFAKFIMWSFQELFR 778

[Close]

BLAST of GR401646 vs. TrEMBL
Match: D7ST90_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_55.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00029697001 PE=4 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 9.276e-15
Identity = 36/49 (73.47%), Postives = 42/49 (85.71%), Query Frame = -3

Query:  248 VVMRCDINFEISSYGRSFNTLIGRTAHIEFLECDIFVKFIMWSFPELFR 394
            V MRCD+NF+ S+ GR+ NT+IGR AHIEFLE DIF +FIMWSFPELFR
Sbjct:  736 VFMRCDVNFDTSNQGRNLNTIIGRAAHIEFLETDIFARFIMWSFPELFR 784

[Close]

BLAST of GR401646 vs. TrEMBL
Match: A5BAS1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025317 PE=4 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 9.276e-15
Identity = 36/49 (73.47%), Postives = 42/49 (85.71%), Query Frame = -3

Query:  248 VVMRCDINFEISSYGRSFNTLIGRTAHIEFLECDIFVKFIMWSFPELFR 394
            V MRCD+NF+ S+ GR+ NT+IGR AHIEFLE DIF +FIMWSFPELFR
Sbjct:  578 VFMRCDVNFDTSNQGRNLNTIIGRAAHIEFLETDIFARFIMWSFPELFR 626

[Close]

BLAST of GR401646 vs. TrEMBL
Match: C4IYS4_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.582e-14
Identity = 35/47 (74.47%), Postives = 42/47 (89.36%), Query Frame = -3

Query:  248 MRCDINFEISSYGRSFNTLIGRTAHIEFLECDIFVKFIMWSFPELFR 388
            MRCD+NF+ S++GRS NT+IGR AHIEFLE DI+ KFIMWSFP+LFR
Sbjct:  279 MRCDVNFDQSNHGRSLNTMIGRAAHIEFLETDIYAKFIMWSFPDLFR 325

[Close]

BLAST of GR401646 vs. TrEMBL
Match: Q2QX94_ORYSJ (ZW18 protein, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os12g06800 PE=4 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.067e-14
Identity = 35/49 (71.43%), Postives = 42/49 (85.71%), Query Frame = -3

Query:  248 VVMRCDINFEISSYGRSFNTLIGRTAHIEFLECDIFVKFIMWSFPELFR 394
            + MRCD+NF+ S+ GR+ NT+IGR AHIEFLE DI+ KFIMWSFPELFR
Sbjct:  763 IFMRCDVNFDQSAQGRNLNTMIGRAAHIEFLETDIYAKFIMWSFPELFR 811

[Close]

BLAST of GR401646 vs. TrEMBL
Match: A3CF93_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_35335 PE=4 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.067e-14
Identity = 35/49 (71.43%), Postives = 42/49 (85.71%), Query Frame = -3

Query:  248 VVMRCDINFEISSYGRSFNTLIGRTAHIEFLECDIFVKFIMWSFPELFR 394
            + MRCD+NF+ S+ GR+ NT+IGR AHIEFLE DI+ KFIMWSFPELFR
Sbjct:  759 IFMRCDVNFDQSAQGRNLNTMIGRAAHIEFLETDIYAKFIMWSFPELFR 807

[Close]

BLAST of GR401646 vs. TrEMBL
Match: C5YSA5_SORBI (Putative uncharacterized protein Sb08g004040 OS=Sorghum bicolor GN=Sb08g004040 PE=4 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 6.013e-14
Identity = 34/47 (72.34%), Postives = 41/47 (87.23%), Query Frame = -3

Query:  248 MRCDINFEISSYGRSFNTLIGRTAHIEFLECDIFVKFIMWSFPELFR 388
            MRCD+NF+ S+ GRS NT+IGR AHIEFLE D++ KFIMWSFP+LFR
Sbjct:  765 MRCDVNFDQSNQGRSLNTMIGRAAHIEFLETDLYAKFIMWSFPDLFR 811

[Close]

BLAST of GR401646 vs. TrEMBL
Match: A2ZIE5_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_37591 PE=4 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 6.013e-14
Identity = 34/49 (69.39%), Postives = 42/49 (85.71%), Query Frame = -3

Query:  248 VVMRCDINFEISSYGRSFNTLIGRTAHIEFLECDIFVKFIMWSFPELFR 394
            + +RCD+NF+ S+ GR+ NT+IGR AHIEFLE DI+ KFIMWSFPELFR
Sbjct:  758 IFIRCDVNFDQSAQGRNLNTMIGRAAHIEFLETDIYAKFIMWSFPELFR 806

[Close]

BLAST of GR401646 vs. TAIR peptide
Match: AT1G58350.3 (| Symbols: ZW18 | Putative serine esterase family protein | chr1:21663131-21666827 REVERSE LENGTH=711)

HSP 1 Score: 78.1814 bits (191), Expect = 1.543e-15
Identity = 33/49 (67.35%), Postives = 41/49 (83.67%), Query Frame = -3

Query:  248 VVMRCDINFEISSYGRSFNTLIGRTAHIEFLECDIFVKFIMWSFPELFR 394
            V MRCD+NF+++ YGR+ N+ IGR AHIEFLE DIF +FIMWSF +LFR
Sbjct:  663 VFMRCDVNFDMTVYGRNLNSFIGRAAHIEFLESDIFARFIMWSFQDLFR 711

[Close]

BLAST of GR401646 vs. TAIR peptide
Match: AT1G58350.2 (| Symbols: ZW18 | Putative serine esterase family protein | chr1:21663131-21666827 REVERSE LENGTH=794)

HSP 1 Score: 78.1814 bits (191), Expect = 1.543e-15
Identity = 33/49 (67.35%), Postives = 41/49 (83.67%), Query Frame = -3

Query:  248 VVMRCDINFEISSYGRSFNTLIGRTAHIEFLECDIFVKFIMWSFPELFR 394
            V MRCD+NF+++ YGR+ N+ IGR AHIEFLE DIF +FIMWSF +LFR
Sbjct:  746 VFMRCDVNFDMTVYGRNLNSFIGRAAHIEFLESDIFARFIMWSFQDLFR 794

[Close]

BLAST of GR401646 vs. TAIR peptide
Match: AT1G58350.1 (| Symbols: ZW18 | Putative serine esterase family protein | chr1:21663131-21666827 REVERSE LENGTH=794)

HSP 1 Score: 78.1814 bits (191), Expect = 1.543e-15
Identity = 33/49 (67.35%), Postives = 41/49 (83.67%), Query Frame = -3

Query:  248 VVMRCDINFEISSYGRSFNTLIGRTAHIEFLECDIFVKFIMWSFPELFR 394
            V MRCD+NF+++ YGR+ N+ IGR AHIEFLE DIF +FIMWSF +LFR
Sbjct:  746 VFMRCDVNFDMTVYGRNLNSFIGRAAHIEFLESDIFARFIMWSFQDLFR 794

[Close]

BLAST of GR401646 vs. TAIR peptide
Match: AT1G09980.2 (| Symbols: | Putative serine esterase family protein | chr1:3256541-3260866 REVERSE LENGTH=801)

HSP 1 Score: 77.0258 bits (188), Expect = 3.438e-15
Identity = 32/49 (65.31%), Postives = 40/49 (81.63%), Query Frame = -3

Query:  248 VVMRCDINFEISSYGRSFNTLIGRTAHIEFLECDIFVKFIMWSFPELFR 394
            V MRCD+NF+ + YGR+ N+ IGR AHIEFLE D+F +FIMWSF +LFR
Sbjct:  753 VFMRCDVNFDTTLYGRNLNSFIGRAAHIEFLESDVFARFIMWSFQDLFR 801

[Close]

BLAST of GR401646 vs. TAIR peptide
Match: AT1G09980.1 (| Symbols: | Putative serine esterase family protein | chr1:3256541-3260866 REVERSE LENGTH=802)

HSP 1 Score: 77.0258 bits (188), Expect = 3.438e-15
Identity = 32/49 (65.31%), Postives = 40/49 (81.63%), Query Frame = -3

Query:  248 VVMRCDINFEISSYGRSFNTLIGRTAHIEFLECDIFVKFIMWSFPELFR 394
            V MRCD+NF+ + YGR+ N+ IGR AHIEFLE D+F +FIMWSF +LFR
Sbjct:  754 VFMRCDVNFDTTLYGRNLNSFIGRAAHIEFLESDVFARFIMWSFQDLFR 802

The following BLAST results are available for this feature:

BLAST of GR401646 vs. TrEMBL
BLAST of GR401646 vs. TAIR peptide

BLAST of GR401646 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9SQ96_RICCO	1.096e-15	82.61	Putative uncharacterized protein OS=Ricinus commun...	[more]
B9R6R9_RICCO	2.441e-15	75.51	Putative uncharacterized protein OS=Ricinus commun...	[more]
B9IQD8_POPTR	2.441e-15	78.72	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
D7ST90_VITVI	9.276e-15	73.47	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5BAS1_VITVI	9.276e-15	73.47	Putative uncharacterized protein OS=Vitis vinifera...	[more]
C4IYS4_MAIZE	1.582e-14	74.47	Putative uncharacterized protein OS=Zea mays PE=2 ...	[more]
Q2QX94_ORYSJ	2.067e-14	71.43	ZW18 protein, putative, expressed OS=Oryza sativa ...	[more]
A3CF93_ORYSJ	2.067e-14	71.43	Putative uncharacterized protein OS=Oryza sativa s...	[more]
C5YSA5_SORBI	6.013e-14	72.34	Putative uncharacterized protein Sb08g004040 OS=So...	[more]
A2ZIE5_ORYSI	6.013e-14	69.39	Putative uncharacterized protein OS=Oryza sativa s...	[more]

BLAST of GR401646 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G58350.3	1.543e-15	67.35	\| Symbols: ZW18 \| Putative serine esterase family...	[more]
AT1G58350.2	1.543e-15	67.35	\| Symbols: ZW18 \| Putative serine esterase family...	[more]
AT1G58350.1	1.543e-15	67.35	\| Symbols: ZW18 \| Putative serine esterase family...	[more]
AT1G09980.2	3.438e-15	65.31	\| Symbols: \| Putative serine esterase family pro...	[more]
AT1G09980.1	3.438e-15	65.31	\| Symbols: \| Putative serine esterase family pro...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR12482	UNCHARACTERIZED	coord: 1..49 score: 1.6

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR401646 ID=GR401646; Name=GR401646; organism=Cicer arietinum; type=EST; length=396bp
GCCCGACAAGCAAAATAGATTGAATTTTGGCAAAAGGGTTTTTGAATATC
ATGTGACACACTATACAGCATTTTACCAAATTTCCTAAGCCTACTTAACT
AACAACAACTACAAAATAACAAACACTTGTGATCTTTGCATCCTACGCCC
GTGCTTCTGATCTTTGTACACATACAAATGCAAATTTTTGAAATAAAACA
TTTAAAAAATTCACACGAATTACATCTGAATTTCCTTGTGTTTAATACCT
GAACAGCTCAGGGAAAGACCACATTATGAACTTGACAAAAATGTCACACT
CGAGGAATTCAATATGAGCGGTGCGTCCAATGAGTGTGTTAAAGCTCCTG
CCGTAGGAAGAAATTTCAAAGTTTATATCACAGCGCATGACCACGC

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