GR404098

EST Overview


Name	GR404098
Unique Name	GR404098
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	284

Libraries


Library Name	Type
LIBEST_024785 ICCV2 Salinity-stressed chickpea root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
KEGG analysis for Cicer arietinum unigene v1	2011-01-05
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR404098 vs. SwissProt
Match: IF1A_ONOVI (Eukaryotic translation initiation factor 1A OS=Onobrychis viciifolia PE=2 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 6.747e-28
Identity = 61/75 (81.33%), Postives = 61/75 (81.33%), Query Frame = 3

Query:    3 HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPDNTRLNXXXXXXXXXXXXATANDY 227
            HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILK MPDEARLLKAYGELPDNTRLN             TANDY
Sbjct:   60 HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKLMPDEARLLKAYGELPDNTRLNEGIGAGGLDEEMDTANDY 134

[Close]

BLAST of GR404098 vs. SwissProt
Match: IF1A_WHEAT (Eukaryotic translation initiation factor 1A OS=Triticum aestivum PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 9.119e-25
Identity = 53/57 (92.98%), Postives = 54/57 (94.74%), Query Frame = 3

Query:    3 HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPDNTRLN 173
            HIRGKMHKKVWIAAGDI+LVGLRDYQDDKADVILKYM DEARLLKAYGELPD  RLN
Sbjct:   60 HIRGKMHKKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDTVRLN 116

[Close]

BLAST of GR404098 vs. SwissProt
Match: IF1AY_PANTR (Eukaryotic translation initiation factor 1A, Y-chromosomal OS=Pan troglodytes GN=EIF1AY PE=2 SV=3)

HSP 1 Score: 92.4337 bits (228), Expect = 7.477e-19
Identity = 43/57 (75.44%), Postives = 49/57 (85.96%), Query Frame = 3

Query:    3 HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPDNTRLN 173
            HIRGK+ KKVWI   DIILVGLRDYQD+KADVILKY  DEAR LKAYGELP++ ++N
Sbjct:   60 HIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKIN 116

[Close]

BLAST of GR404098 vs. SwissProt
Match: IF1AY_HUMAN (Eukaryotic translation initiation factor 1A, Y-chromosomal OS=Homo sapiens GN=EIF1AY PE=1 SV=4)

HSP 1 Score: 92.4337 bits (228), Expect = 7.477e-19
Identity = 43/57 (75.44%), Postives = 49/57 (85.96%), Query Frame = 3

Query:    3 HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPDNTRLN 173
            HIRGK+ KKVWI   DIILVGLRDYQD+KADVILKY  DEAR LKAYGELP++ ++N
Sbjct:   60 HIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKIN 116

[Close]

BLAST of GR404098 vs. SwissProt
Match: IF1AX_PONAB (Eukaryotic translation initiation factor 1A, X-chromosomal OS=Pongo abelii GN=EIF1AX PE=2 SV=3)

HSP 1 Score: 92.4337 bits (228), Expect = 7.477e-19
Identity = 43/57 (75.44%), Postives = 49/57 (85.96%), Query Frame = 3

Query:    3 HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPDNTRLN 173
            HIRGK+ KKVWI   DIILVGLRDYQD+KADVILKY  DEAR LKAYGELP++ ++N
Sbjct:   60 HIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKIN 116

[Close]

BLAST of GR404098 vs. SwissProt
Match: IF1AX_MOUSE (Eukaryotic translation initiation factor 1A, X-chromosomal OS=Mus musculus GN=Eif1ay PE=2 SV=3)

HSP 1 Score: 92.4337 bits (228), Expect = 7.477e-19
Identity = 43/57 (75.44%), Postives = 49/57 (85.96%), Query Frame = 3

Query:    3 HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPDNTRLN 173
            HIRGK+ KKVWI   DIILVGLRDYQD+KADVILKY  DEAR LKAYGELP++ ++N
Sbjct:   60 HIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKIN 116

[Close]

BLAST of GR404098 vs. SwissProt
Match: IF1AX_HUMAN (Eukaryotic translation initiation factor 1A, X-chromosomal OS=Homo sapiens GN=EIF1AX PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 7.477e-19
Identity = 43/57 (75.44%), Postives = 49/57 (85.96%), Query Frame = 3

Query:    3 HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPDNTRLN 173
            HIRGK+ KKVWI   DIILVGLRDYQD+KADVILKY  DEAR LKAYGELP++ ++N
Sbjct:   60 HIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKIN 116

[Close]

BLAST of GR404098 vs. SwissProt
Match: IF1A_RAT (Eukaryotic translation initiation factor 1A OS=Rattus norvegicus GN=Eif1a PE=2 SV=3)

HSP 1 Score: 92.0485 bits (227), Expect = 9.766e-19
Identity = 42/57 (73.68%), Postives = 49/57 (85.96%), Query Frame = 3

Query:    3 HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPDNTRLN 173
            HIRGK+ KKVWI   DIIL+GLRDYQD+KADVILKY  DEAR LKAYGELP++ ++N
Sbjct:   60 HIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKIN 116

[Close]

BLAST of GR404098 vs. SwissProt
Match: IF1A_MOUSE (Eukaryotic translation initiation factor 1A OS=Mus musculus GN=Eif1a PE=2 SV=3)

HSP 1 Score: 92.0485 bits (227), Expect = 9.766e-19
Identity = 42/57 (73.68%), Postives = 49/57 (85.96%), Query Frame = 3

Query:    3 HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPDNTRLN 173
            HIRGK+ KKVWI   DIIL+GLRDYQD+KADVILKY  DEAR LKAYGELP++ ++N
Sbjct:   60 HIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKIN 116

[Close]

BLAST of GR404098 vs. SwissProt
Match: IF1A_RABIT (Eukaryotic translation initiation factor 1A OS=Oryctolagus cuniculus GN=EIF1A PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 2.176e-18
Identity = 42/57 (73.68%), Postives = 49/57 (85.96%), Query Frame = 3

Query:    3 HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPDNTRLN 173
            HIRGK+ KKVWI   DIILVGLR+YQD+KADVILKY  DEAR LKAYGELP++ ++N
Sbjct:   60 HIRGKLRKKVWINTSDIILVGLREYQDNKADVILKYNADEARSLKAYGELPEHAKIN 116

[Close]

BLAST of GR404098 vs. TrEMBL
Match: A9PE28_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_645034 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.186e-25
Identity = 58/75 (77.33%), Postives = 60/75 (80.00%), Query Frame = 3

Query:    3 HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPDNTRLNXXXXXXXXXXXXATANDY 227
            HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELP+NTRLN               +DY
Sbjct:   60 HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLNEGIAGGLDEEDDGAGDDY 134

[Close]

BLAST of GR404098 vs. TrEMBL
Match: A9PCD3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_732377 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.186e-25
Identity = 58/75 (77.33%), Postives = 60/75 (80.00%), Query Frame = 3

Query:    3 HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPDNTRLNXXXXXXXXXXXXATANDY 227
            HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELP+NTRLN               +DY
Sbjct:   60 HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLNEGIAGGLDEEDDGAGDDY 134

[Close]

BLAST of GR404098 vs. TrEMBL
Match: A5BQH0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021007 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.186e-25
Identity = 58/75 (77.33%), Postives = 60/75 (80.00%), Query Frame = 3

Query:    3 HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPDNTRLNXXXXXXXXXXXXATANDY 227
            HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELP+NTRLN               +DY
Sbjct:   60 HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLNEGIAGGLDEEDEGAGDDY 134

[Close]

BLAST of GR404098 vs. TrEMBL
Match: Q2XTB8_SOLTU (Putative translation initiation factor eIF-1A-like OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.641e-25
Identity = 55/57 (96.49%), Postives = 57/57 (100.00%), Query Frame = 3

Query:    3 HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPDNTRLN 173
            HIRGKMHKKVWIAAGDI+LVGLRDYQDDKADVILKYMPDEARLLKAYGELP+NTRLN
Sbjct:   60 HIRGKMHKKVWIAAGDIVLVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 116

[Close]

BLAST of GR404098 vs. TrEMBL
Match: Q8VXT0_BETVU (Translation initiation factor (EIF-1A) OS=Beta vulgaris GN=eif-1A PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.450e-25
Identity = 56/57 (98.25%), Postives = 56/57 (98.25%), Query Frame = 3

Query:    3 HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPDNTRLN 173
            HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPDN RLN
Sbjct:   60 HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPDNIRLN 116

[Close]

BLAST of GR404098 vs. TrEMBL
Match: B5M1Y2_RHEAU (Translation initiation factor OS=Rheum australe PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.450e-25
Identity = 56/57 (98.25%), Postives = 56/57 (98.25%), Query Frame = 3

Query:    3 HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPDNTRLN 173
            HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPDN RLN
Sbjct:   60 HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPDNIRLN 116

[Close]

BLAST of GR404098 vs. TrEMBL
Match: A9NLE4_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.450e-25
Identity = 57/75 (76.00%), Postives = 60/75 (80.00%), Query Frame = 3

Query:    3 HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPDNTRLNXXXXXXXXXXXXATANDY 227
            HIRGKMHKKVWIAAGDI+LVGLRDYQDDKADVILKYMPDEARLLKAYGELP+N RLN              A+DY
Sbjct:   60 HIRGKMHKKVWIAAGDIVLVGLRDYQDDKADVILKYMPDEARLLKAYGELPENVRLNEGIAGGLDEDEEGGADDY 134

[Close]

BLAST of GR404098 vs. TrEMBL
Match: B9SSH7_RICCO (Eif-1a, putative OS=Ricinus communis GN=RCOM_0510890 PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 4.505e-25
Identity = 57/75 (76.00%), Postives = 60/75 (80.00%), Query Frame = 3

Query:    3 HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPDNTRLNXXXXXXXXXXXXATANDY 227
            HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELP++TRLN               +DY
Sbjct:   60 HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIAGGLDEEDDGAGDDY 134

[Close]

BLAST of GR404098 vs. TrEMBL
Match: A9P2I8_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 7.685e-25
Identity = 55/57 (96.49%), Postives = 56/57 (98.25%), Query Frame = 3

Query:    3 HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPDNTRLN 173
            HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELP+N RLN
Sbjct:   60 HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENVRLN 116

[Close]

BLAST of GR404098 vs. TrEMBL
Match: Q9FKI2_ARATH (Putative translation initiation factor eIF-1A OS=Arabidopsis thaliana GN=MXH1.2 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.311e-24
Identity = 57/75 (76.00%), Postives = 58/75 (77.33%), Query Frame = 3

Query:    3 HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPDNTRLNXXXXXXXXXXXXATANDY 227
            HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYM DEARLLKAYGELP+NTRLN                DY
Sbjct:   60 HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMSDEARLLKAYGELPENTRLNEGIVGDLDDDDDVVGEDY 134

[Close]

BLAST of GR404098 vs. TAIR peptide
Match: AT5G35680.2 (| Symbols: | Nucleic acid-binding, OB-fold-like protein | chr5:13858152-13858589 REVERSE LENGTH=145)

HSP 1 Score: 115.931 bits (289), Expect = 4.957e-27
Identity = 57/75 (76.00%), Postives = 58/75 (77.33%), Query Frame = 3

Query:    3 HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPDNTRLNXXXXXXXXXXXXATANDY 227
            HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYM DEARLLKAYGELP+NTRLN                DY
Sbjct:   60 HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMSDEARLLKAYGELPENTRLNEGIVGDLDDDDDVVGEDY 134

[Close]

BLAST of GR404098 vs. TAIR peptide
Match: AT5G35680.1 (| Symbols: | Nucleic acid-binding, OB-fold-like protein | chr5:13858152-13858589 REVERSE LENGTH=145)

HSP 1 Score: 115.931 bits (289), Expect = 4.957e-27
Identity = 57/75 (76.00%), Postives = 58/75 (77.33%), Query Frame = 3

Query:    3 HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPDNTRLNXXXXXXXXXXXXATANDY 227
            HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYM DEARLLKAYGELP+NTRLN                DY
Sbjct:   60 HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMSDEARLLKAYGELPENTRLNEGIVGDLDDDDDVVGEDY 134

[Close]

BLAST of GR404098 vs. TAIR peptide
Match: AT5G35680.3 (| Symbols: | Nucleic acid-binding, OB-fold-like protein | chr5:13858085-13858589 REVERSE LENGTH=150)

HSP 1 Score: 115.546 bits (288), Expect = 6.474e-27
Identity = 55/57 (96.49%), Postives = 56/57 (98.25%), Query Frame = 3

Query:    3 HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPDNTRLN 173
            HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYM DEARLLKAYGELP+NTRLN
Sbjct:   60 HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMSDEARLLKAYGELPENTRLN 116

[Close]

BLAST of GR404098 vs. TAIR peptide
Match: AT2G04520.1 (| Symbols: | Nucleic acid-binding, OB-fold-like protein | chr2:1574802-1575239 REVERSE LENGTH=145)

HSP 1 Score: 115.161 bits (287), Expect = 8.455e-27
Identity = 54/57 (94.74%), Postives = 56/57 (98.25%), Query Frame = 3

Query:    3 HIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPDNTRLN 173
            HIRGKMHKKVWIAAGDI+LVGLRDYQDDKADVILKYM DEARLLKAYGELP+NTRLN
Sbjct:   60 HIRGKMHKKVWIAAGDIVLVGLRDYQDDKADVILKYMSDEARLLKAYGELPENTRLN 116

The following BLAST results are available for this feature:

BLAST of GR404098 vs. SwissProt
BLAST of GR404098 vs. TrEMBL
BLAST of GR404098 vs. TAIR peptide

BLAST of GR404098 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
IF1A_ONOVI	6.747e-28	81.33	Eukaryotic translation initiation factor 1A OS=Ono...	[more]
IF1A_WHEAT	9.119e-25	92.98	Eukaryotic translation initiation factor 1A OS=Tri...	[more]
IF1AY_PANTR	7.477e-19	75.44	Eukaryotic translation initiation factor 1A, Y-chr...	[more]
IF1AY_HUMAN	7.477e-19	75.44	Eukaryotic translation initiation factor 1A, Y-chr...	[more]
IF1AX_PONAB	7.477e-19	75.44	Eukaryotic translation initiation factor 1A, X-chr...	[more]
IF1AX_MOUSE	7.477e-19	75.44	Eukaryotic translation initiation factor 1A, X-chr...	[more]
IF1AX_HUMAN	7.477e-19	75.44	Eukaryotic translation initiation factor 1A, X-chr...	[more]
IF1A_RAT	9.766e-19	73.68	Eukaryotic translation initiation factor 1A OS=Rat...	[more]
IF1A_MOUSE	9.766e-19	73.68	Eukaryotic translation initiation factor 1A OS=Mus...	[more]
IF1A_RABIT	2.176e-18	73.68	Eukaryotic translation initiation factor 1A OS=Ory...	[more]

BLAST of GR404098 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
A9PE28_POPTR	1.186e-25	77.33	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A9PCD3_POPTR	1.186e-25	77.33	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A5BQH0_VITVI	1.186e-25	77.33	Putative uncharacterized protein OS=Vitis vinifera...	[more]
Q2XTB8_SOLTU	2.641e-25	96.49	Putative translation initiation factor eIF-1A-like...	[more]
Q8VXT0_BETVU	3.450e-25	98.25	Translation initiation factor (EIF-1A) OS=Beta vul...	[more]
B5M1Y2_RHEAU	3.450e-25	98.25	Translation initiation factor OS=Rheum australe PE...	[more]
A9NLE4_PICSI	3.450e-25	76.00	Putative uncharacterized protein OS=Picea sitchens...	[more]
B9SSH7_RICCO	4.505e-25	76.00	Eif-1a, putative OS=Ricinus communis GN=RCOM_05108...	[more]
A9P2I8_PICSI	7.685e-25	96.49	Putative uncharacterized protein OS=Picea sitchens...	[more]
Q9FKI2_ARATH	1.311e-24	76.00	Putative translation initiation factor eIF-1A OS=A...	[more]

BLAST of GR404098 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 4


Match Name	E-value	Identity	Description
AT5G35680.2	4.957e-27	76.00	\| Symbols: \| Nucleic acid-binding, OB-fold-like p...	[more]
AT5G35680.1	4.957e-27	76.00	\| Symbols: \| Nucleic acid-binding, OB-fold-like p...	[more]
AT5G35680.3	6.474e-27	96.49	\| Symbols: \| Nucleic acid-binding, OB-fold-like p...	[more]
AT2G04520.1	8.455e-27	94.74	\| Symbols: \| Nucleic acid-binding, OB-fold-like p...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001253	Translation initiation factor 1A (eIF-1A)	PANTHER	PTHR21668	EIF-1A	coord: 1..86 score: 3.7
IPR001253	Translation initiation factor 1A (eIF-1A)	SMART	SM00652	no description	coord: 1..51 score: 2.2
IPR006196	RNA-binding domain, S1, IF1 type	PFAM	PF01176	eIF-1a	coord: 1..35 score: 6.6
IPR006196	RNA-binding domain, S1, IF1 type	PROFILE	PS50832	S1_IF1_TYPE	coord: 1..37 score: 18
IPR012340	Nucleic acid-binding, OB-fold	GENE3D	2.40.50.140	no description	coord: 1..85 score: 1.2
IPR016027	Nucleic acid-binding, OB-fold-like	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 1..86 score: 4.4
None	No IPR available	SEG	seg	seg	coord: 58..69 score
None	No IPR available	SEG	seg	seg	coord: 21..40 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR404098 ID=GR404098; Name=GR404098; organism=Cicer arietinum; type=EST; length=284bp
GTCATATCCGTGGTAAGATGCACAAGAAAGTTTGGATCGCCGCCGGTGAT
ATCATCCTCGTCGGACTCCGTGATTATCAGGATGATAAGGCTGACGTCAT
TCTTAAATACATGCCTGATGAAGCTCGTCTTCTGAAGGCTTATGGTGAGC
TTCCTGATAATACCAGACTTAATGAAGGTATTGGTGGTGGTCTTGATGAA
GAAGATGATGCTACTGCTAATGATTACATCGAGTTTGAAGATGAGGATAT
TGATAAGATTTAAATGAACTAATTGGTATTTTTC

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003743	translation initiation factor activity
GO:0003723	RNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006413	translational initiation

Vocabulary: **INTERPRO**
Term	Definition
IPR001253	TIF_eIF-1A
IPR006196	RNA-binding_domain_S1_IF1
IPR012340	NA-bd_OB-fold
IPR016027	Nucleic acid-binding, OB-fold-like

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