GR408465
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR408465 vs. TrEMBL
Match: C6SZX9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 6.950e-22 Identity = 52/79 (65.82%), Postives = 65/79 (82.28%), Query Frame = 2 Query: 92 MSLINPKTDKLLKRLTIVATITASYFLLTADYGPQPNVLDPIKRQIRSAESSVKEYFFGSKTESHE-----IDSNKDHP 313 MSL++P+T+KL++RLT V T+ ASYFLLTADYGP+PN LDPIK+QI SA+S+VKEY GSK ES E +DSNKD+P Sbjct: 1 MSLMSPRTEKLVRRLTFVTTVAASYFLLTADYGPKPNALDPIKKQILSAQSTVKEYIVGSKKESQESHVGRLDSNKDNP 79
BLAST of GR408465 vs. TrEMBL
Match: B9RDQ8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1615100 PE=4 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.947e-17 Identity = 41/58 (70.69%), Postives = 51/58 (87.93%), Query Frame = 2 Query: 101 INPKTDKLLKRLTIVATITASYFLLTADYGPQPNVLDPIKRQIRSAESSVKEYFFGSK 274 +NPKTDK+++R T+VAT ASYFLLTADYGPQPN +DP+K+ I SAE+SVKE+ FGSK Sbjct: 1 MNPKTDKIVRRTTMVATAVASYFLLTADYGPQPNAVDPVKKAILSAENSVKEFIFGSK 58
BLAST of GR408465 vs. TrEMBL
Match: B9I8I2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_572241 PE=4 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 6.732e-17 Identity = 42/61 (68.85%), Postives = 52/61 (85.25%), Query Frame = 2 Query: 101 INPKTDKLLKRLTIVATITASYFLLTADYGPQPNVLDPIKRQIRSAESSVKEYFFGSKTES 283 +NP+TDK+++R T+VAT ASYFLLTADYGPQPN ++PIKR I SA+SSVKE+ FGS ES Sbjct: 1 MNPRTDKIVRRTTMVATAVASYFLLTADYGPQPNAVEPIKRAILSAQSSVKEFIFGSGKES 61
BLAST of GR408465 vs. TrEMBL
Match: D7UC84_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_46.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00026894001 PE=4 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.148e-16 Identity = 42/61 (68.85%), Postives = 51/61 (83.61%), Query Frame = 2 Query: 101 INPKTDKLLKRLTIVATITASYFLLTADYGPQPNVLDPIKRQIRSAESSVKEYFFGSKTES 283 +NP+TDKL++R T+VAT TASYFLLTADYG +PN LDPIK I SAE SVKE+ FGS+ +S Sbjct: 1 MNPRTDKLVRRTTMVATATASYFLLTADYGAEPNALDPIKNAIHSAERSVKEFIFGSEKDS 61
BLAST of GR408465 vs. TrEMBL
Match: Q6DYB5_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana GN=At4G00530 PE=4 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 7.443e-16 Identity = 39/60 (65.00%), Postives = 51/60 (85.00%), Query Frame = 2 Query: 101 INPKTDKLLKRLTIVATITASYFLLTADYGPQPNVLDPIKRQIRSAESSVKEYFFGSKTE 280 +NP+TDK+++R T+VAT ASYFLLT DYGP+PNVLDPIKR+I +A+ SVK++ FG K E Sbjct: 1 MNPQTDKVVRRTTMVATAVASYFLLTGDYGPEPNVLDPIKRKILAAQDSVKQFIFGPKGE 60
BLAST of GR408465 vs. TrEMBL
Match: D7M5N0_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_327720 PE=4 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 7.443e-16 Identity = 39/58 (67.24%), Postives = 50/58 (86.21%), Query Frame = 2 Query: 101 INPKTDKLLKRLTIVATITASYFLLTADYGPQPNVLDPIKRQIRSAESSVKEYFFGSK 274 +NP+TDK+++R T+VAT ASYFLLT DYGP+PNVLDPIKR+I SA+ SVK++ FG K Sbjct: 1 MNPQTDKVVRRTTMVATAVASYFLLTGDYGPEPNVLDPIKRKILSAQDSVKQFIFGPK 58
BLAST of GR408465 vs. TrEMBL
Match: Q9LQ84_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana GN=At1g01725 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.314e-12 Identity = 34/58 (58.62%), Postives = 47/58 (81.03%), Query Frame = 2 Query: 101 INPKTDKLLKRLTIVATITASYFLLTADYGPQPNVLDPIKRQIRSAESSVKEYFFGSK 274 +NP+ +K++K ++VAT SYFLLTADYGP+PN LDPI+++I SA+ SVKE+ F SK Sbjct: 1 MNPQIEKVVKVTSVVATAVVSYFLLTADYGPEPNALDPIRQRILSAQDSVKEFIFPSK 58
BLAST of GR408465 vs. TrEMBL
Match: D7KP78_ARALY (Putative uncharacterized protein (Fragment) OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_470102 PE=4 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 8.516e-12 Identity = 33/58 (56.90%), Postives = 46/58 (79.31%), Query Frame = 2 Query: 101 INPKTDKLLKRLTIVATITASYFLLTADYGPQPNVLDPIKRQIRSAESSVKEYFFGSK 274 +NP+ +K+++ ++VAT SYFLLTADYGP+PN LDPI+++I SA+ SVKE F SK Sbjct: 1 MNPQIEKVVRVTSVVATAVVSYFLLTADYGPEPNALDPIRQRILSAQDSVKELIFPSK 58
BLAST of GR408465 vs. TrEMBL
Match: B4UWA6_ARAHY (Putative uncharacterized protein (Fragment) OS=Arachis hypogaea PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.971e-10 Identity = 30/36 (83.33%), Postives = 36/36 (100.00%), Query Frame = 2 Query: 92 MSLINPKTDKLLKRLTIVATITASYFLLTADYGPQP 199 MSL++PKT+KL+KR+TIVAT+TASYFLLTADYGPQP Sbjct: 1 MSLLSPKTEKLVKRVTIVATVTASYFLLTADYGPQP 36
BLAST of GR408465 vs. TAIR peptide
Match: AT4G00530.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G01725.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr4:233030-233592 REVERSE LENGTH=71) HSP 1 Score: 87.0409 bits (214), Expect = 6.327e-18 Identity = 39/60 (65.00%), Postives = 51/60 (85.00%), Query Frame = 2 Query: 101 INPKTDKLLKRLTIVATITASYFLLTADYGPQPNVLDPIKRQIRSAESSVKEYFFGSKTE 280 +NP+TDK+++R T+VAT ASYFLLT DYGP+PNVLDPIKR+I +A+ SVK++ FG K E Sbjct: 1 MNPQTDKVVRRTTMVATAVASYFLLTGDYGPEPNVLDPIKRKILAAQDSVKQFIFGPKGE 60
BLAST of GR408465 vs. TAIR peptide
Match: AT1G01725.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G00530.1); Has 20 Blast hits to 20 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:270016-270735 REVERSE LENGTH=62) HSP 1 Score: 76.2554 bits (186), Expect = 1.117e-14 Identity = 34/58 (58.62%), Postives = 47/58 (81.03%), Query Frame = 2 Query: 101 INPKTDKLLKRLTIVATITASYFLLTADYGPQPNVLDPIKRQIRSAESSVKEYFFGSK 274 +NP+ +K++K ++VAT SYFLLTADYGP+PN LDPI+++I SA+ SVKE+ F SK Sbjct: 1 MNPQIEKVVKVTSVVATAVVSYFLLTADYGPEPNALDPIRQRILSAQDSVKEFIFPSK 58 The following BLAST results are available for this feature:
BLAST of GR408465 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 9
BLAST of GR408465 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR408465 ID=GR408465; Name=GR408465; organism=Cicer arietinum; type=EST; length=523bpback to top |