GR408928

EST Overview


Name	GR408928
Unique Name	GR408928
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	735

Libraries


Library Name	Type
LIBEST_024777 ICC1882 dehydration stressed root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR408928 vs. TrEMBL
Match: C6T2X1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 3.212e-46
Identity = 102/186 (54.84%), Postives = 125/186 (67.20%), Query Frame = -1

Query:  163 QSEQATQAIEMASAQSQ-KPSTTIDVCQPKPQHGSFGQKISEITNKAFKGHHARHGXXXXXXXXXXXXXQVESNGHNGSKTETHHYGQTQTQHDKKHGVTKTHITVCVVQAEITQTKENPSPYGASATTTCFGTQAKKNREINNSKKETNLLRKIKNGMSRH-XXXXXXXXXXXXXXXXXKCPKTK 714
            Q E+    +E++  +SQ  P+T I+VCQPK QH SFGQK+SEIT+KAFKG H  +              QVES GHNG+KTETH+YGQTQTQ+DKKHGV+KT ITV VVQA+IT T+E+P PYG   TTTCFG  AKKN E+NN+KK+ NL R+IKNG+S +                  KCPKTK
Sbjct:    5 QCEKPNTKVEVSQPKSQHNPNTAIEVCQPKTQHSSFGQKLSEITSKAFKGRHGSN----QNQLQCYSQTQVESQGHNGTKTETHYYGQTQTQNDKKHGVSKTQITVTVVQAQITHTEEDPYPYG--TTTTCFGAHAKKNGELNNNKKDMNLFRRIKNGLSSYNNNEGGISSSSSDSESDDKCPKTK 184

[Close]

BLAST of GR408928 vs. TrEMBL
Match: C6TBX6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 4.638e-45
Identity = 101/186 (54.30%), Postives = 121/186 (65.05%), Query Frame = -1

Query:  163 QSEQATQAIEMASAQSQ-KPSTTIDVCQPKPQHGSFGQKISEITNKAFKGHHARHGXXXXXXXXXXXXXQVESNGHNGSKTETHHYGQTQTQHDKKHGVTKTHITVCVVQAEITQTKENPSPYGASATTTCFGTQAKKNREINNSKKETNLLRKIKNGMSRH-XXXXXXXXXXXXXXXXXKCPKTK 714
            Q E+    +E++  +S  KP+T I+VCQPK QH SFGQK+SEIT+KAFKG H  +              QVES GHNG+KTE H+YGQTQTQ+DKKHGV+KT ITV VVQA+IT T E   PY    TTTCFG  AKKN E+NN+KK+ NL R+IKNG+SRH                  KCPKTK
Sbjct:    5 QCEKPDTTVEVSQPKSHHKPNTAIEVCQPKTQHSSFGQKLSEITSKAFKGRHGSN----QNQLQYYSQTQVESQGHNGTKTEAHYYGQTQTQNDKKHGVSKTQITVTVVQAQITHT-EKKDPYPYDTTTTCFGAHAKKNGELNNNKKDMNLFRRIKNGLSRHNNNEGGNSSSSDSESDDEKCPKTK 185

The following BLAST results are available for this feature:

BLAST of GR408928 vs. TrEMBL

BLAST of GR408928 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 2


Match Name	E-value	Identity	Description
C6T2X1_SOYBN	3.212e-46	54.84	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6TBX6_SOYBN	4.638e-45	54.30	Putative uncharacterized protein OS=Glycine max PE...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 10..28 score
None	No IPR available	SEG	seg	seg	coord: 29..46 score: NAcoord: 52..72 score
None	No IPR available	SEG	seg	seg	coord: 63..76 score: NAcoord: 169..186 score
None	No IPR available	SEG	seg	seg	coord: 121..138 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR408928 ID=GR408928; Name=GR408928; organism=Cicer arietinum; type=EST; length=735bp
AAGTCAAATATTGACATTTATTAACCCCGATTATGTTTATTACAAAAACG
ACATAATAAAATTATAAAGGCACTCTTTATTTATAAAGATGTAATTCCAT
TTAATTAAACAAACTTTGTTTTGTTGCATCTTGTTTGCAGCTTCTAGTTC
CATGCATCAATGCTTTGTCTTTGGACACTTCTTCTCGTTGTCACTTTCGC
TGTCACTGCTGCTGCTGTTTCCCTCACCTTTATGGCGGGACATTCCATTC
TTAATCTTCCTGAGCAAATTCGTTTCCTTCTTACTGTTGTTAATCTCTCT
ATTCTTCTTAGCTTGAGTCCCAAAGCATGTTGTAGTTGCACTTGCACCAT
AAGGAGAAGGGTTCTCTTTGGTTTGAGTGATTTCGGCTTGCACCACACAA
ACGGTGATATGGGTTTTGGTGACACCGTGCTTCTTGTCATGTTGGGTCTG
AGTCTGACCATAGTGGTGAGTTTCTGTTTTGGAGCCATTGTGGCCATTTG
ATTCAACCTGAATTTGGTTGCTGTAGGATTGAAGTTGATTCTGGCTACTG
CCATGGCGGGCATGGTGTCCTTTGAAAGCCTTGTTAGTTATTTCGGAAAT
CTTTTGGCCGAACGAACCGTGCTGGGGTTTCGGTTGGCAGACATCAATGG
TAGTACTAGGTTTCTGAGACTGAGCTGAAGCCATTTCAATAGCTTGTGTT
GCTTGCTCACTCTGATTTATTTCTTTGAAGTTTTC

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