GR420588
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR420588 vs. TrEMBL
Match: B9HE62_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_868739 PE=4 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.469e-23 Identity = 67/130 (51.54%), Postives = 80/130 (61.54%), Query Frame = -1 Query: 213 SIFGLEWFEPLVTFAWKLVFTCLF*VRVYTASKVDNELEAAKRDYLQTRFNRHYKNKIIIPKLVDWYXXXXXXXXXXXXDWICFQLFDEIRNQAVKCIE--GREKML*FYFSHMVQMKP---CFRLLLHQ 587 SIFG EW EPLVTFA VRVYTAS+V+ ELE AKRDYLQ NK+IIPKL+DWY DWIC QL +E+RN+AVKC+E GR+ + S +VQ+ P FRLLLH+ Sbjct: 450 SIFGFEWSEPLVTFALCCGSWSSPAVRVYTASRVEEELEVAKRDYLQATVGISRTNKLIIPKLLDWYLLDFAKDMESLLDWICLQLPNELRNEAVKCLERRGRDPL-----SQIVQVMPYDFSFRLLLHR 574
BLAST of GR420588 vs. TrEMBL
Match: A4Q957_POPTN (Putative uncharacterized protein OS=Populus tremula PE=4 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.957e-23 Identity = 66/130 (50.77%), Postives = 79/130 (60.77%), Query Frame = -1 Query: 213 SIFGLEWFEPLVTFAWKLVFTCLF*VRVYTASKVDNELEAAKRDYLQTRFNRHYKNKIIIPKLVDWYXXXXXXXXXXXXDWICFQLFDEIRNQAVKCIE--GREKML*FYFSHMVQMKP---CFRLLLHQ 587 S FG EW EPLVTFA VRVYTAS+V+ ELE AKRDYLQ NK+IIPKL+DWY DWIC QL +E+RN+AVKC+E GR+ + S +VQ+ P FRLLLH+ Sbjct: 446 SFFGFEWSEPLVTFALCCESWSSPAVRVYTASRVEEELEVAKRDYLQATVGISRTNKLIIPKLLDWYLLDFAKDMESLLDWICLQLPNELRNEAVKCLERRGRDPL-----SQIVQVMPYDFSFRLLLHR 570
BLAST of GR420588 vs. TrEMBL
Match: B9H6E7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_801115 PE=4 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.300e-22 Identity = 65/128 (50.78%), Postives = 79/128 (61.72%), Query Frame = -1 Query: 216 IFGLEWFEPLVTFAWKLVFTCLF*VRVYTASKVDNELEAAKRDYLQTRFNRHYKNKIIIPKLVDWYXXXXXXXXXXXXDWICFQLFDEIRNQAVKCIE--GREKML*FYFSHMVQMKP---CFRLLLH 584 IFG EW EPLVTF+ VRVYTAS+V+ ELEAAKRDYLQ NK+IIPKL+DWY DW+C QL +E+RN+AVKC+E GR+ + S +VQ+ P FRLLLH Sbjct: 402 IFGFEWSEPLVTFSPSYGSWSSPAVRVYTASQVEEELEAAKRDYLQATVGISRTNKLIIPKLLDWYLPDFVKDMKSLLDWVCLQLPNELRNEAVKCLERRGRDPL-----SQLVQVMPYDFSFRLLLH 524
BLAST of GR420588 vs. TrEMBL
Match: A4Q962_POPTN (Putative uncharacterized protein OS=Populus tremula PE=4 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.300e-22 Identity = 66/130 (50.77%), Postives = 79/130 (60.77%), Query Frame = -1 Query: 213 SIFGLEWFEPLVTFAWKLVFTCLF*VRVYTASKVDNELEAAKRDYLQTRFNRHYKNKIIIPKLVDWYXXXXXXXXXXXXDWICFQLFDEIRNQAVKCIE--GREKML*FYFSHMVQMKP---CFRLLLHQ 587 S FG EW EPLVTFA VRVYTAS+V+ ELE AKRDYLQ NK+IIPKL+DWY DWIC QL +E+RN+AVKC+E GR+ + S +VQ+ P FRLLLH+ Sbjct: 446 SFFGFEWSEPLVTFALCCGSWSSPAVRVYTASRVEEELEVAKRDYLQATVGISRTNKLIIPKLLDWYLLDFAKDMESLLDWICLQLPNELRNEAVKCLERRGRDPL-----SQIVQVMPYDFSFRLLLHR 570
BLAST of GR420588 vs. TrEMBL
Match: A4Q955_POPTN (Putative uncharacterized protein OS=Populus tremula PE=4 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.300e-22 Identity = 66/130 (50.77%), Postives = 79/130 (60.77%), Query Frame = -1 Query: 213 SIFGLEWFEPLVTFAWKLVFTCLF*VRVYTASKVDNELEAAKRDYLQTRFNRHYKNKIIIPKLVDWYXXXXXXXXXXXXDWICFQLFDEIRNQAVKCIE--GREKML*FYFSHMVQMKP---CFRLLLHQ 587 S FG EW EPLVTFA VRVYTAS+V+ ELE AKRDYLQ NK+IIPKL+DWY DWIC QL +E+RN+AVKC+E GR+ + S +VQ+ P FRLLLH+ Sbjct: 446 SFFGFEWSEPLVTFALCCENWSSPAVRVYTASRVEEELEVAKRDYLQATVGISRTNKLIIPKLLDWYLLDFAKDMESLLDWICLQLPNELRNEAVKCLERRGRDPL-----SQIVQVMPYDFSFRLLLHR 570
BLAST of GR420588 vs. TrEMBL
Match: A4Q954_POPTN (Putative uncharacterized protein OS=Populus tremula PE=4 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.300e-22 Identity = 66/130 (50.77%), Postives = 79/130 (60.77%), Query Frame = -1 Query: 213 SIFGLEWFEPLVTFAWKLVFTCLF*VRVYTASKVDNELEAAKRDYLQTRFNRHYKNKIIIPKLVDWYXXXXXXXXXXXXDWICFQLFDEIRNQAVKCIE--GREKML*FYFSHMVQMKP---CFRLLLHQ 587 S FG EW EPLVTFA VRVYTAS+V+ ELE AKRDYLQ NK+IIPKL+DWY DWIC QL +E+RN+AVKC+E GR+ + S +VQ+ P FRLLLH+ Sbjct: 446 SFFGFEWSEPLVTFALCCGSWSSPAVRVYTASRVEEELEVAKRDYLQATVGISRTNKLIIPKLLDWYLLDFAKDMESLLDWICLQLPNELRNEAVKCLERRGRDPL-----SQIVQVMPYDFSFRLLLHR 570
BLAST of GR420588 vs. TrEMBL
Match: A4Q946_POPTN (Putative uncharacterized protein OS=Populus tremula PE=4 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.300e-22 Identity = 66/130 (50.77%), Postives = 79/130 (60.77%), Query Frame = -1 Query: 213 SIFGLEWFEPLVTFAWKLVFTCLF*VRVYTASKVDNELEAAKRDYLQTRFNRHYKNKIIIPKLVDWYXXXXXXXXXXXXDWICFQLFDEIRNQAVKCIE--GREKML*FYFSHMVQMKP---CFRLLLHQ 587 S FG EW EPLVTFA VRVYTAS+V+ ELE AKRDYLQ NK+IIPKL+DWY DWIC QL +E+RN+AVKC+E GR+ + S +VQ+ P FRLLLH+ Sbjct: 446 SFFGFEWSEPLVTFALCCENWSSPAVRVYTASRVEEELEVAKRDYLQATVGISRTNKLIIPKLLDWYLLDFAKDMESLLDWICLQLPNELRNEAVKCLERRGRDPL-----SQIVQVMPYDFSFRLLLHR 570
BLAST of GR420588 vs. TrEMBL
Match: A4Q945_POPTN (Putative uncharacterized protein OS=Populus tremula PE=4 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.300e-22 Identity = 66/130 (50.77%), Postives = 79/130 (60.77%), Query Frame = -1 Query: 213 SIFGLEWFEPLVTFAWKLVFTCLF*VRVYTASKVDNELEAAKRDYLQTRFNRHYKNKIIIPKLVDWYXXXXXXXXXXXXDWICFQLFDEIRNQAVKCIE--GREKML*FYFSHMVQMKP---CFRLLLHQ 587 S FG EW EPLVTFA VRVYTAS+V+ ELE AKRDYLQ NK+IIPKL+DWY DWIC QL +E+RN+AVKC+E GR+ + S +VQ+ P FRLLLH+ Sbjct: 446 SFFGFEWSEPLVTFALCCENWSSPAVRVYTASRVEEELEVAKRDYLQATVGISRTNKLIIPKLLDWYLLDFAKDMESLLDWICLQLPNELRNEAVKCLERRGRDPL-----SQIVQVMPYDFSFRLLLHR 570
BLAST of GR420588 vs. TrEMBL
Match: A4Q942_POPTN (Putative uncharacterized protein OS=Populus tremula PE=4 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.300e-22 Identity = 66/130 (50.77%), Postives = 79/130 (60.77%), Query Frame = -1 Query: 213 SIFGLEWFEPLVTFAWKLVFTCLF*VRVYTASKVDNELEAAKRDYLQTRFNRHYKNKIIIPKLVDWYXXXXXXXXXXXXDWICFQLFDEIRNQAVKCIE--GREKML*FYFSHMVQMKP---CFRLLLHQ 587 S FG EW EPLVTFA VRVYTAS+V+ ELE AKRDYLQ NK+IIPKL+DWY DWIC QL +E+RN+AVKC+E GR+ + S +VQ+ P FRLLLH+ Sbjct: 446 SFFGFEWSEPLVTFALCCGSWSSPAVRVYTASRVEEELEVAKRDYLQATVGISRTNKLIIPKLLDWYLLDFAKDMESLLDWICLQLPNELRNEAVKCLERRGRDPL-----SQIVQVMPYDFSFRLLLHR 570
BLAST of GR420588 vs. TrEMBL
Match: A4Q964_POPTN (Putative uncharacterized protein OS=Populus tremula PE=4 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.698e-22 Identity = 66/130 (50.77%), Postives = 79/130 (60.77%), Query Frame = -1 Query: 213 SIFGLEWFEPLVTFAWKLVFTCLF*VRVYTASKVDNELEAAKRDYLQTRFNRHYKNKIIIPKLVDWYXXXXXXXXXXXXDWICFQLFDEIRNQAVKCIE--GREKML*FYFSHMVQMKP---CFRLLLHQ 587 S FG EW EPLVTFA VRVYTAS+V+ ELE AKRDYLQ NK+IIPKL+DWY DWIC QL +E+RN+AVKC+E GR+ + S +VQ+ P FRLLLH+ Sbjct: 446 SFFGFEWSEPLVTFALCCGNWSSPAVRVYTASRVEEELEVAKRDYLQATVGISRTNKLIIPKLLDWYLLDFAKDMESLLDWICLQLPNELRNEAVKCLERRGRDPL-----SQIVQVMPYDFSFRLLLHR 570
BLAST of GR420588 vs. TAIR peptide
Match: AT4G37080.3 (| Symbols: | Protein of unknown function, DUF547 | chr4:17473719-17476716 FORWARD LENGTH=610) HSP 1 Score: 105.916 bits (263), Expect = 1.787e-23 Identity = 58/125 (46.40%), Postives = 72/125 (57.60%), Query Frame = -1 Query: 213 SIFGLEWFEPLVTFAWKLVFTCLF*VRVYTASKVDNELEAAKRDYLQTRFNRHYKNKIIIPKLVDWYXXXXXXXXXXXXDWICFQLFDEIRNQAVKCIEGREKML*FYFSHMVQMKPCFRLLLHQ 587 S FGLEW EPLVTFA VRVYTA+ V+ ELEAAKRDYLQ NK+++PK++DWY DW+C QL D++R +A KC+E + K +V FRLLLHQ Sbjct: 486 STFGLEWSEPLVTFALACGSWSSPAVRVYTAANVEEELEAAKRDYLQASVGISKNNKLMLPKVLDWYLLDFAKDLESLLDWVCLQLPDKLREEATKCMERKNKESLMELVQVVPYDFSFRLLLHQ 610
BLAST of GR420588 vs. TAIR peptide
Match: AT4G37080.1 (| Symbols: | Protein of unknown function, DUF547 | chr4:17474205-17476716 FORWARD LENGTH=597) HSP 1 Score: 105.916 bits (263), Expect = 1.787e-23 Identity = 58/125 (46.40%), Postives = 72/125 (57.60%), Query Frame = -1 Query: 213 SIFGLEWFEPLVTFAWKLVFTCLF*VRVYTASKVDNELEAAKRDYLQTRFNRHYKNKIIIPKLVDWYXXXXXXXXXXXXDWICFQLFDEIRNQAVKCIEGREKML*FYFSHMVQMKPCFRLLLHQ 587 S FGLEW EPLVTFA VRVYTA+ V+ ELEAAKRDYLQ NK+++PK++DWY DW+C QL D++R +A KC+E + K +V FRLLLHQ Sbjct: 473 STFGLEWSEPLVTFALACGSWSSPAVRVYTAANVEEELEAAKRDYLQASVGISKNNKLMLPKVLDWYLLDFAKDLESLLDWVCLQLPDKLREEATKCMERKNKESLMELVQVVPYDFSFRLLLHQ 597
BLAST of GR420588 vs. TAIR peptide
Match: AT4G37080.2 (| Symbols: | Protein of unknown function, DUF547 | chr4:17473719-17476716 FORWARD LENGTH=610) HSP 1 Score: 105.916 bits (263), Expect = 1.787e-23 Identity = 58/125 (46.40%), Postives = 72/125 (57.60%), Query Frame = -1 Query: 213 SIFGLEWFEPLVTFAWKLVFTCLF*VRVYTASKVDNELEAAKRDYLQTRFNRHYKNKIIIPKLVDWYXXXXXXXXXXXXDWICFQLFDEIRNQAVKCIEGREKML*FYFSHMVQMKPCFRLLLHQ 587 S FGLEW EPLVTFA VRVYTA+ V+ ELEAAKRDYLQ NK+++PK++DWY DW+C QL D++R +A KC+E + K +V FRLLLHQ Sbjct: 486 STFGLEWSEPLVTFALACGSWSSPAVRVYTAANVEEELEAAKRDYLQASVGISKNNKLMLPKVLDWYLLDFAKDLESLLDWVCLQLPDKLREEATKCMERKNKESLMELVQVVPYDFSFRLLLHQ 610
BLAST of GR420588 vs. TAIR peptide
Match: AT5G42690.3 (| Symbols: | Protein of unknown function, DUF547 | chr5:17116630-17118960 REVERSE LENGTH=488) HSP 1 Score: 73.559 bits (179), Expect = 9.826e-14 Identity = 47/99 (47.47%), Postives = 54/99 (54.55%), Query Frame = -1 Query: 291 SIFGLEWFEPLVTFAWKLVFTCLF*VRVYTASKVDNELEAAKRDYLQTRFNRHYKNKIIIPKLVDWYXXXXXXXXXXXXDWICFQLFDEIRNQAVKCIE 587 S FGLE EPLVTFA VRVYTASKV+ ELE AKR+YL+ KI IPKL+DWY DWI QL E+ A+ C+E Sbjct: 364 SKFGLELSEPLVTFALSCGSWSSPAVRVYTASKVEEELEVAKREYLEASVGISVV-KIGIPKLMDWYSHDFAKDIESLLDWIFLQLPTELGKDALNCVE 461
BLAST of GR420588 vs. TAIR peptide
Match: AT5G42690.2 (| Symbols: | Protein of unknown function, DUF547 | chr5:17116630-17119492 REVERSE LENGTH=540) HSP 1 Score: 73.559 bits (179), Expect = 9.826e-14 Identity = 47/99 (47.47%), Postives = 54/99 (54.55%), Query Frame = -1 Query: 291 SIFGLEWFEPLVTFAWKLVFTCLF*VRVYTASKVDNELEAAKRDYLQTRFNRHYKNKIIIPKLVDWYXXXXXXXXXXXXDWICFQLFDEIRNQAVKCIE 587 S FGLE EPLVTFA VRVYTASKV+ ELE AKR+YL+ KI IPKL+DWY DWI QL E+ A+ C+E Sbjct: 416 SKFGLELSEPLVTFALSCGSWSSPAVRVYTASKVEEELEVAKREYLEASVGISVV-KIGIPKLMDWYSHDFAKDIESLLDWIFLQLPTELGKDALNCVE 513
BLAST of GR420588 vs. TAIR peptide
Match: AT5G42690.1 (| Symbols: | Protein of unknown function, DUF547 | chr5:17116630-17119492 REVERSE LENGTH=539) HSP 1 Score: 73.559 bits (179), Expect = 9.826e-14 Identity = 47/99 (47.47%), Postives = 54/99 (54.55%), Query Frame = -1 Query: 291 SIFGLEWFEPLVTFAWKLVFTCLF*VRVYTASKVDNELEAAKRDYLQTRFNRHYKNKIIIPKLVDWYXXXXXXXXXXXXDWICFQLFDEIRNQAVKCIE 587 S FGLE EPLVTFA VRVYTASKV+ ELE AKR+YL+ KI IPKL+DWY DWI QL E+ A+ C+E Sbjct: 415 SKFGLELSEPLVTFALSCGSWSSPAVRVYTASKVEEELEVAKREYLEASVGISVV-KIGIPKLMDWYSHDFAKDIESLLDWIFLQLPTELGKDALNCVE 512
BLAST of GR420588 vs. TAIR peptide
Match: AT2G39690.2 (| Symbols: | Protein of unknown function, DUF547 | chr2:16541489-16543267 FORWARD LENGTH=418) HSP 1 Score: 50.8322 bits (120), Expect = 6.821e-7 Identity = 31/104 (29.81%), Postives = 53/104 (50.96%), Query Frame = -1 Query: 276 FGLEWFEPLVTFAWKLVFTCLF*VRVYTASKVDNELEAAKRDYLQTRFNRHYKNKIIIPKLVDWYXXXXXXXXXXXXDWICFQL--FDEIRNQAVKCIEGREKM 581 +GL + EP VTFA +RVYTA +V N+L A+ +YL+ K KI++P+L+ W+ +WI QL ++ ++C++ + K+ Sbjct: 294 YGLGYSEPNVTFALCRGSWSSPALRVYTADEVVNDLGRARVEYLEASVGVSSKKKIVVPQLLQWHMKDFADDIESLLEWIYSQLPRSGNLKGMIMECLKRKAKV 397
BLAST of GR420588 vs. TAIR peptide
Match: AT2G39690.1 (| Symbols: | Protein of unknown function, DUF547 | chr2:16541165-16543267 FORWARD LENGTH=498) HSP 1 Score: 50.8322 bits (120), Expect = 6.821e-7 Identity = 31/104 (29.81%), Postives = 53/104 (50.96%), Query Frame = -1 Query: 276 FGLEWFEPLVTFAWKLVFTCLF*VRVYTASKVDNELEAAKRDYLQTRFNRHYKNKIIIPKLVDWYXXXXXXXXXXXXDWICFQL--FDEIRNQAVKCIEGREKM 581 +GL + EP VTFA +RVYTA +V N+L A+ +YL+ K KI++P+L+ W+ +WI QL ++ ++C++ + K+ Sbjct: 374 YGLGYSEPNVTFALCRGSWSSPALRVYTADEVVNDLGRARVEYLEASVGVSSKKKIVVPQLLQWHMKDFADDIESLLEWIYSQLPRSGNLKGMIMECLKRKAKV 477 The following BLAST results are available for this feature:
BLAST of GR420588 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR420588 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 8
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR420588 ID=GR420588; Name=GR420588; organism=Cicer arietinum; type=EST; length=623bpback to top |