GR914665

EST Overview


Name	GR914665
Unique Name	GR914665
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	276

Libraries


Library Name	Type
LIBEST_024968 Early immune responsive suppression subtracted cDNA libraries of Chickpea (Cicer arietinum cv. JG-62) wilt	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR914665 vs. TrEMBL
Match: C6TLT7_SOYBN (Late-embryogenesis abundant protein 1 OS=Glycine max GN=LEA-1 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 5.571e-23
Identity = 58/79 (73.42%), Postives = 64/79 (81.01%), Query Frame = 3

Query:   57 MSTSDKPEV---GERDEKEKQD---EGKGGFLGTVKGFIQDIGEKIEETIGFGKPTADVSAIHVPKINLDEADLVVDVL 275
            MSTSDKPEV   G +DEK K+D   EGKGGF+  VK FI DIGEKIEE IGFGKPTADV+AIH+P INL +ADLVVDVL
Sbjct:    1 MSTSDKPEVVERGSKDEKHKEDDQEEGKGGFIEKVKDFIHDIGEKIEEAIGFGKPTADVTAIHIPSINLHKADLVVDVL 79

[Close]

BLAST of GR914665 vs. TrEMBL
Match: C6TIF1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 8.045e-22
Identity = 56/79 (70.89%), Postives = 63/79 (79.75%), Query Frame = 3

Query:   57 MSTSDKPEV---GERDEKEKQD---EGKGGFLGTVKGFIQDIGEKIEETIGFGKPTADVSAIHVPKINLDEADLVVDVL 275
            MSTSDKPE    G +DEK K+D   EGKGGF+  VK FI DIGEKIEE IGFGKP+ADV+AIH+P INL +ADLVVDVL
Sbjct:    1 MSTSDKPEEVERGSKDEKHKEDDQEEGKGGFIEKVKDFIHDIGEKIEEAIGFGKPSADVTAIHIPSINLHKADLVVDVL 79

[Close]

BLAST of GR914665 vs. TrEMBL
Match: D7T2N7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_94.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00038264001 PE=4 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.792e-21
Identity = 55/76 (72.37%), Postives = 62/76 (81.58%), Query Frame = 3

Query:   57 MSTSDKPE-VGERDEKEKQD--EGKGGFLGTVKGFIQDIGEKIEETIGFGKPTADVSAIHVPKINLDEADLVVDVL 275
            MS+SDKPE V ERD KEK D  E KGGF+  VK FI DIGEKIEE IGFGKPTADV+ IH+PKINL+ AD+V+DVL
Sbjct:   86 MSSSDKPEEVVERDAKEKDDKNEEKGGFIEKVKDFIHDIGEKIEEAIGFGKPTADVTGIHIPKINLERADIVIDVL 161

[Close]

BLAST of GR914665 vs. TrEMBL
Match: C6T750_SOYBN (Late-embryogenesis abundant protein 2 OS=Glycine max GN=LEA-2 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.792e-21
Identity = 54/77 (70.13%), Postives = 62/77 (80.52%), Query Frame = 3

Query:   57 MSTSDKPEVGER----DEKEKQDEGKGGFLGTVKGFIQDIGEKIEETIGFGKPTADVSAIHVPKINLDEADLVVDVL 275
            MSTSDK EV ER    DEK K++  KGGFL TVK FIQDIGEKIE  +GFGKPTADV+ IH+P INL++A+LVVDVL
Sbjct:    1 MSTSDKSEVVERGAKDDEKPKEEHEKGGFLDTVKDFIQDIGEKIEGAVGFGKPTADVTGIHIPSINLEKAELVVDVL 77

[Close]

BLAST of GR914665 vs. TrEMBL
Match: B9T526_RICCO (Late embryogenesis abundant protein Lea14-A, putative OS=Ricinus communis GN=RCOM_0211380 PE=4 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.792e-21
Identity = 51/75 (68.00%), Postives = 63/75 (84.00%), Query Frame = 3

Query:   57 MSTSDKPEVGERDEKEK--QDEGKGGFLGTVKGFIQDIGEKIEETIGFGKPTADVSAIHVPKINLDEADLVVDVL 275
            M++SDKPEV +RD K+K  +DE KGGF+  VK FI DIGEKIEE IGFGKPTADV+ +H+P INL++AD+VVDVL
Sbjct:    1 MASSDKPEVVDRDVKDKDDKDEEKGGFIDKVKDFIHDIGEKIEEAIGFGKPTADVTGVHIPSINLEKADIVVDVL 75

[Close]

BLAST of GR914665 vs. TrEMBL
Match: A5B1L7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042205 PE=4 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.792e-21
Identity = 55/76 (72.37%), Postives = 62/76 (81.58%), Query Frame = 3

Query:   57 MSTSDKPE-VGERDEKEKQD--EGKGGFLGTVKGFIQDIGEKIEETIGFGKPTADVSAIHVPKINLDEADLVVDVL 275
            MS+SDKPE V ERD KEK D  E KGGF+  VK FI DIGEKIEE IGFGKPTADV+ IH+PKINL+ AD+V+DVL
Sbjct:    1 MSSSDKPEEVVERDAKEKDDKNEEKGGFIEKVKDFIHDIGEKIEEAIGFGKPTADVTGIHIPKINLERADIVIDVL 76

[Close]

BLAST of GR914665 vs. TrEMBL
Match: Q8LCW6_ARATH (Similar to late embryogenesis abundant proteins OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.588e-20
Identity = 54/90 (60.00%), Postives = 65/90 (72.22%), Query Frame = 3

Query:   57 MSTS-DKPEV----------------GERDEKEKQDEGKGGFLGTVKGFIQDIGEKIEETIGFGKPTADVSAIHVPKINLDEADLVVDVL 275
            MSTS DKPE+                 ++D+ E+++EGKGGFL  VK FI DIGEK+E TIGFGKPTADVSAIH+PKINL+ AD+VVDVL
Sbjct:    1 MSTSEDKPEIISRVVHQEGDVEIVDRSQKDKDEEKEEGKGGFLDKVKDFIHDIGEKLEGTIGFGKPTADVSAIHIPKINLERADIVVDVL 90

[Close]

BLAST of GR914665 vs. TrEMBL
Match: O80576_ARATH (At2g44060 OS=Arabidopsis thaliana GN=At2g44060 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.588e-20
Identity = 54/90 (60.00%), Postives = 65/90 (72.22%), Query Frame = 3

Query:   57 MSTS-DKPEV----------------GERDEKEKQDEGKGGFLGTVKGFIQDIGEKIEETIGFGKPTADVSAIHVPKINLDEADLVVDVL 275
            MSTS DKPE+                 ++D+ E+++EGKGGFL  VK FI DIGEK+E TIGFGKPTADVSAIH+PKINL+ AD+VVDVL
Sbjct:    1 MSTSEDKPEIISRVVHQEGDVEIVDRSQKDKDEEKEEGKGGFLDKVKDFIHDIGEKLEGTIGFGKPTADVSAIHIPKINLERADIVVDVL 90

[Close]

BLAST of GR914665 vs. TrEMBL
Match: D7LKV4_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_670353 PE=4 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.588e-20
Identity = 51/79 (64.56%), Postives = 62/79 (78.48%), Query Frame = 3

Query:   45 LISEMSTSDKPEVGERDEKEK--QDEGKGGFLGTVKGFIQDIGEKIEETIGFGKPTADVSAIHVPKINLDEADLVVDVL 275
            L+S +      E+ +R +K+K  ++EGKGGFL  VK FI DIGEKIE TIGFGKPTADVSAIH+PKINL+ AD+VVDVL
Sbjct:   10 LLSRVHQEGDVEIVDRSQKDKDEEEEGKGGFLDKVKDFIHDIGEKIEGTIGFGKPTADVSAIHIPKINLERADIVVDVL 88

[Close]

BLAST of GR914665 vs. TrEMBL
Match: B9HGA5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_819645 PE=4 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 7.530e-20
Identity = 50/74 (67.57%), Postives = 61/74 (82.43%), Query Frame = 3

Query:   57 MSTSDKPEVGERDEKEK-QDEGKGGFLGTVKGFIQDIGEKIEETIGFGKPTADVSAIHVPKINLDEADLVVDVL 275
            M++SDKPE+ +RD KE  +DE KGGF+  VK FIQDIGEKIE  IGFGKPTADV+ IH P INL++A++VVDVL
Sbjct:    1 MASSDKPEIVDRDVKEDDKDEEKGGFIDKVKDFIQDIGEKIEGAIGFGKPTADVTEIHFPTINLEKAEIVVDVL 74

[Close]

BLAST of GR914665 vs. TAIR peptide
Match: AT2G44060.2 (| Symbols: | Late embryogenesis abundant protein, group 2 | chr2:18226922-18227988 FORWARD LENGTH=325)

HSP 1 Score: 101.679 bits (252), Expect = 9.759e-23
Identity = 54/90 (60.00%), Postives = 65/90 (72.22%), Query Frame = 3

Query:   57 MSTS-DKPEV----------------GERDEKEKQDEGKGGFLGTVKGFIQDIGEKIEETIGFGKPTADVSAIHVPKINLDEADLVVDVL 275
            MSTS DKPE+                 ++D+ E+++EGKGGFL  VK FI DIGEK+E TIGFGKPTADVSAIH+PKINL+ AD+VVDVL
Sbjct:    1 MSTSEDKPEIISRVVHQEGDVEIVDRSQKDKDEEKEEGKGGFLDKVKDFIHDIGEKLEGTIGFGKPTADVSAIHIPKINLERADIVVDVL 90

[Close]

BLAST of GR914665 vs. TAIR peptide
Match: AT2G44060.1 (| Symbols: | Late embryogenesis abundant protein, group 2 | chr2:18226922-18227988 FORWARD LENGTH=325)

HSP 1 Score: 101.679 bits (252), Expect = 9.759e-23
Identity = 54/90 (60.00%), Postives = 65/90 (72.22%), Query Frame = 3

Query:   57 MSTS-DKPEV----------------GERDEKEKQDEGKGGFLGTVKGFIQDIGEKIEETIGFGKPTADVSAIHVPKINLDEADLVVDVL 275
            MSTS DKPE+                 ++D+ E+++EGKGGFL  VK FI DIGEK+E TIGFGKPTADVSAIH+PKINL+ AD+VVDVL
Sbjct:    1 MSTSEDKPEIISRVVHQEGDVEIVDRSQKDKDEEKEEGKGGFLDKVKDFIHDIGEKLEGTIGFGKPTADVSAIHIPKINLERADIVVDVL 90

The following BLAST results are available for this feature:

BLAST of GR914665 vs. TrEMBL
BLAST of GR914665 vs. TAIR peptide

BLAST of GR914665 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6TLT7_SOYBN	5.571e-23	73.42	Late-embryogenesis abundant protein 1 OS=Glycine m...	[more]
C6TIF1_SOYBN	8.045e-22	70.89	Putative uncharacterized protein OS=Glycine max PE...	[more]
D7T2N7_VITVI	1.792e-21	72.37	Whole genome shotgun sequence of line PN40024, sca...	[more]
C6T750_SOYBN	1.792e-21	70.13	Late-embryogenesis abundant protein 2 OS=Glycine m...	[more]
B9T526_RICCO	1.792e-21	68.00	Late embryogenesis abundant protein Lea14-A, putat...	[more]
A5B1L7_VITVI	1.792e-21	72.37	Putative uncharacterized protein OS=Vitis vinifera...	[more]
Q8LCW6_ARATH	2.588e-20	60.00	Similar to late embryogenesis abundant proteins OS...	[more]
O80576_ARATH	2.588e-20	60.00	At2g44060 OS=Arabidopsis thaliana GN=At2g44060 PE=...	[more]
D7LKV4_ARALY	2.588e-20	64.56	Predicted protein OS=Arabidopsis lyrata subsp. lyr...	[more]
B9HGA5_POPTR	7.530e-20	67.57	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]

BLAST of GR914665 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT2G44060.2	9.759e-23	60.00	\| Symbols: \| Late embryogenesis abundant protein,...	[more]
AT2G44060.1	9.759e-23	60.00	\| Symbols: \| Late embryogenesis abundant protein,...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 9..25 score
None	No IPR available	SEG	seg	seg	coord: 13..24 score: NAcoord: 32..49 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR914665 ID=GR914665; Name=GR914665; organism=Cicer arietinum; type=EST; length=276bp
GATTTCGAGCGGCCGCCCGGGCAGGTGTTTCATTTCATTCTTCACTGATC
TCAGAGATGTCAACATCTGATAAACCAGAAGTAGGGGAAAGGGATGAAAA
AGAAAAGCAAGATGAAGGGAAGGGTGGATTTCTCGGTACGGTGAAGGGTT
TCATTCAGGACATTGGTGAGAAGATTGAGGAAACAATTGGGTTTGGGAAG
CCAACTGCAGATGTTTCAGCGATACATGTTCCTAAAATTAATCTTGATGA
AGCAGATCTTGTTGTTGATGTTCTCA

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