GR915037

EST Overview


Name	GR915037
Unique Name	GR915037
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	486

Libraries


Library Name	Type
LIBEST_024969 Early immune responsive suppression subtracted cDNA libraries of Chickpea (Cicer arietinum cv. WR-315) wilt	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR915037 vs. SwissProt
Match: RS30_ARATH (40S ribosomal protein S30 OS=Arabidopsis thaliana GN=RPS30A PE=1 SV=3)

HSP 1 Score: 59.3066 bits (142), Expect = 1.070e-8
Identity = 28/40 (70.00%), Postives = 30/40 (75.00%), Query Frame = 1

Query:  100 MGKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQY 219
            MGKVHGSLARAGKVRGQTP          PRGRAHKR+Q+
Sbjct:    1 MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRLQH 40

[Close]

BLAST of GR915037 vs. TrEMBL
Match: C7Z6G4_NECH7 (Putative uncharacterized protein OS=Nectria haematococca (strain 77-13-4 / FGSC 9596 / MPVI) GN=NECHADRAFT_76091 PE=4 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 5.162e-21
Identity = 53/101 (52.48%), Postives = 66/101 (65.35%), Query Frame = 3

Query:  207 AYAVLGLSVFMMKPNEVHSDSDTESFELLNDIDWTNL--------CDPMSAVDIAGDTSASQFMQNGGSISFSGTVCEAGYNAAKMILLEFASLLEEVGKW 485
            A  VLGL VFMM PN+     D E +E LN++DW  L          P S +D   + +A +F++ GG ISFSG +CE GYNAAKMILLEF+SL+EEVGKW
Sbjct:  711 AALVLGLYVFMMPPNQDSRFGDVEPYEFLNEVDWPLLGGNGMATTSTPGSTIDDGQENAARRFLREGGVISFSGVICEGGYNAAKMILLEFSSLIEEVGKW 811

[Close]

BLAST of GR915037 vs. TrEMBL
Match: C7ZAL7_NECH7 (Putative uncharacterized protein (Fragment) OS=Nectria haematococca (strain 77-13-4 / FGSC 9596 / MPVI) GN=NECHADRAFT_42814 PE=4 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.720e-12
Identity = 41/99 (41.41%), Postives = 59/99 (59.60%), Query Frame = 3

Query:  207 AYAVLGLSVFMMKPNEVHSDSDTESFELLNDIDWTNLCDPMSAVDIAGDTS------ASQFMQNGGSISFSGTVCEAGYNAAKMILLEFASLLEEVGKW 485
            A  VLGL + ++ P+ +  D +TE FELL+DIDW  L +   A  +   ++      A +F+  GG +SFS  V   G N+A+ +L+ F SLLEEVGKW
Sbjct:  490 AALVLGLYL-LVGPDSLQEDGETEPFELLDDIDWNGLAEEGFAGYVPSSSNRTKSSPAVRFVSMGGPVSFSSMVLSGGLNSARRVLVGFVSLLEEVGKW 587

[Close]

BLAST of GR915037 vs. TrEMBL
Match: Q2UK60_ASPOR (Predicted protein OS=Aspergillus oryzae GN=AO090003000941 PE=4 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.842e-11
Identity = 37/102 (36.27%), Postives = 60/102 (58.82%), Query Frame = 3

Query:  207 AYAVLGLSVFMMKPNEVHSDSDTESFELLNDIDWTNLC--------DPMSAVDIA-GDTSASQFMQNGGSISFSGTVCEAGYNAAKMILLEFASLLEEVGKW 485
            A  VLGL ++M+ P+     +     ++L+DIDW +LC        +P  A      D +A  F++NGG++ F G   ++GYN+A+ ILL++A LL++ GKW
Sbjct:  612 AALVLGLYIYMV-PSSTEPQTGGTPIDILDDIDWNSLCGEGFTSFMEPNGAQSCTESDEAAVNFIRNGGTVYFRGVPFQSGYNSARRILLDYAGLLKDTGKW 712

[Close]

BLAST of GR915037 vs. TrEMBL
Match: B8N3H3_ASPFN (C2H2 transcription factor, putative OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=AFLA_028760 PE=4 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.842e-11
Identity = 37/102 (36.27%), Postives = 60/102 (58.82%), Query Frame = 3

Query:  207 AYAVLGLSVFMMKPNEVHSDSDTESFELLNDIDWTNLC--------DPMSAVDIA-GDTSASQFMQNGGSISFSGTVCEAGYNAAKMILLEFASLLEEVGKW 485
            A  VLGL ++M+ P+     +     ++L+DIDW +LC        +P  A      D +A  F++NGG++ F G   ++GYN+A+ ILL++A LL++ GKW
Sbjct:  612 AALVLGLYIYMV-PSSTEPQTGGTPIDILDDIDWNSLCGEGFTSFMEPNGAQSCTESDEAAVNFIRNGGTVYFRGVPFQSGYNSARRILLDYAGLLKDTGKW 712

[Close]

BLAST of GR915037 vs. TrEMBL
Match: Q0CR80_ASPTN (Putative uncharacterized protein OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=ATEG_03804 PE=4 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.354e-10
Identity = 39/102 (38.24%), Postives = 57/102 (55.88%), Query Frame = 3

Query:  207 AYAVLGLSVFMMKPNEVHSDSDTESFELLNDIDW--------TNLCDPMSAVDIA-GDTSASQFMQNGGSISFSGTVCEAGYNAAKMILLEFASLLEEVGKW 485
            A  VLGL VFM+ PN     +   S ELL+DIDW        T+  +P  +   +  D  A  F++NGG++   G   + GY +A+ ILL++A LL++ GKW
Sbjct:  690 AALVLGLYVFMV-PNPSELQAGGTSIELLDDIDWDKVGTEGFTSFMEPRGSQSFSPSDDPAVNFIRNGGTVYLRGVPFQGGYQSARRILLDYAGLLKDAGKW 790

[Close]

BLAST of GR915037 vs. TrEMBL
Match: Q5B617_EMENI (Putative uncharacterized protein OS=Emericella nidulans GN=AN4013.2 PE=4 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.992e-10
Identity = 39/102 (38.24%), Postives = 55/102 (53.92%), Query Frame = 3

Query:  207 AYAVLGLSVFMMKPNEVHSDSDTESFELLNDIDW--------TNLCDPMSAVDIA-GDTSASQFMQNGGSISFSGTVCEAGYNAAKMILLEFASLLEEVGKW 485
            A  VLGL +FM+ PN         S ELL+DIDW        T+  +P         D  A  F++NGG++ F G   + GY +A+ ILL++A LL++ GKW
Sbjct:  744 AALVLGLYIFMV-PNPSELQVGGTSIELLDDIDWERVGTEGFTSFMEPRGTQTFTPSDDPAVNFIRNGGTVYFRGVPFQGGYQSARRILLDYAGLLKDAGKW 844

[Close]

BLAST of GR915037 vs. TrEMBL
Match: C8V5Q3_EMENI (C2H2 transcription factor, putative (AFU_orthologue; AFUA_1G04110) OS=Aspergillus nidulans FGSC A4 GN=ANIA_04013 PE=4 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.992e-10
Identity = 39/102 (38.24%), Postives = 55/102 (53.92%), Query Frame = 3

Query:  207 AYAVLGLSVFMMKPNEVHSDSDTESFELLNDIDW--------TNLCDPMSAVDIA-GDTSASQFMQNGGSISFSGTVCEAGYNAAKMILLEFASLLEEVGKW 485
            A  VLGL +FM+ PN         S ELL+DIDW        T+  +P         D  A  F++NGG++ F G   + GY +A+ ILL++A LL++ GKW
Sbjct:  744 AALVLGLYIFMV-PNPSELQVGGTSIELLDDIDWERVGTEGFTSFMEPRGTQTFTPSDDPAVNFIRNGGTVYFRGVPFQGGYQSARRILLDYAGLLKDAGKW 844

[Close]

BLAST of GR915037 vs. TrEMBL
Match: A2Q837_ASPNC (Similarity is restricted to the C2H2-type zinc finger motif OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=An01g02940 PE=4 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 2.657e-9
Identity = 38/102 (37.25%), Postives = 54/102 (52.94%), Query Frame = 3

Query:  207 AYAVLGLSVFMMKPNEVHSDSDTESFELLNDIDW--------TNLCDPMSAVDIA-GDTSASQFMQNGGSISFSGTVCEAGYNAAKMILLEFASLLEEVGKW 485
            A  VLGL VFM+ PN         S EL +DIDW        T+  +P         +  A +F++NGG++   G   + GY AA+ ILL++A LL++ GKW
Sbjct:  727 AALVLGLYVFMV-PNPSEMQRGGNSIELFDDIDWQKVGTEGFTSFMEPRKGQPFPPSEEPALEFIKNGGTVYLRGVPIQGGYQAARRILLDYAGLLKDTGKW 827

[Close]

BLAST of GR915037 vs. TrEMBL
Match: A1D4L1_NEOFI (C2H2 type zinc finger domain protein OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=NFIA_020620 PE=4 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 4.532e-9
Identity = 38/102 (37.25%), Postives = 57/102 (55.88%), Query Frame = 3

Query:  207 AYAVLGLSVFMMKPNEVHSDSDTESFELLNDIDW--------TNLCDPM-SAVDIAGDTSASQFMQNGGSISFSGTVCEAGYNAAKMILLEFASLLEEVGKW 485
            A  VLGL  FM  P  + + +   S ELL+D+DW        T+  +P  +    A D SA  F++NGG++   G   + GY +A+ ILL++A LL++ GKW
Sbjct:  730 AALVLGLYTFMA-PRPLETTAGCISVELLDDVDWQQVGREGFTSFMEPRGNHAFTASDNSAVNFIRNGGTLYLRGIPVQGGYQSARRILLDYAGLLKDSGKW 830

[Close]

BLAST of GR915037 vs. TrEMBL
Match: Q4WK10_ASPFU (C2H2 transcription factor, putative OS=Aspergillus fumigatus GN=AFUA_1G04110 PE=4 SV=2)

HSP 1 Score: 63.1586 bits (152), Expect = 1.010e-8
Identity = 38/102 (37.25%), Postives = 56/102 (54.90%), Query Frame = 3

Query:  207 AYAVLGLSVFMMKPNEVHSDSDTESFELLNDIDW--------TNLCDPM-SAVDIAGDTSASQFMQNGGSISFSGTVCEAGYNAAKMILLEFASLLEEVGKW 485
            A  VLGL  FM  P    + +   S ELL+D+DW        T+  +P  +    A D SA  F++NGG++   G   + GY +A+ ILL++A LL++ GKW
Sbjct:  729 AALVLGLYTFMA-PRPPETTAGCISVELLDDVDWQQVGREGFTSFMEPRGNHAFTASDNSAVNFIRNGGTLYLRGIPVQGGYQSARRILLDYAGLLKDSGKW 829

[Close]

BLAST of GR915037 vs. TAIR peptide
Match: AT5G56670.1 (| Symbols: | Ribosomal protein S30 family protein | chr5:22935413-22935981 REVERSE LENGTH=62)

HSP 1 Score: 59.3066 bits (142), Expect = 1.225e-9
Identity = 28/40 (70.00%), Postives = 30/40 (75.00%), Query Frame = 1

Query:  100 MGKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQY 219
            MGKVHGSLARAGKVRGQTP          PRGRAHKR+Q+
Sbjct:    1 MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRLQH 40

[Close]

BLAST of GR915037 vs. TAIR peptide
Match: AT4G29390.1 (| Symbols: | Ribosomal protein S30 family protein | chr4:14465212-14465902 REVERSE LENGTH=62)

HSP 1 Score: 59.3066 bits (142), Expect = 1.225e-9
Identity = 28/40 (70.00%), Postives = 30/40 (75.00%), Query Frame = 1

Query:  100 MGKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQY 219
            MGKVHGSLARAGKVRGQTP          PRGRAHKR+Q+
Sbjct:    1 MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRLQH 40

[Close]

BLAST of GR915037 vs. TAIR peptide
Match: AT2G19750.1 (| Symbols: | Ribosomal protein S30 family protein | chr2:8515037-8515806 FORWARD LENGTH=62)

HSP 1 Score: 59.3066 bits (142), Expect = 1.225e-9
Identity = 28/40 (70.00%), Postives = 30/40 (75.00%), Query Frame = 1

Query:  100 MGKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQY 219
            MGKVHGSLARAGKVRGQTP          PRGRAHKR+Q+
Sbjct:    1 MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRLQH 40

The following BLAST results are available for this feature:

BLAST of GR915037 vs. SwissProt
BLAST of GR915037 vs. TrEMBL
BLAST of GR915037 vs. TAIR peptide

BLAST of GR915037 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 1


Match Name	E-value	Identity	Description
RS30_ARATH	1.070e-8	70.00	40S ribosomal protein S30 OS=Arabidopsis thaliana ...	[more]

BLAST of GR915037 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C7Z6G4_NECH7	5.162e-21	52.48	Putative uncharacterized protein OS=Nectria haemat...	[more]
C7ZAL7_NECH7	5.720e-12	41.41	Putative uncharacterized protein (Fragment) OS=Nec...	[more]
Q2UK60_ASPOR	4.842e-11	36.27	Predicted protein OS=Aspergillus oryzae GN=AO09000...	[more]
B8N3H3_ASPFN	4.842e-11	36.27	C2H2 transcription factor, putative OS=Aspergillus...	[more]
Q0CR80_ASPTN	5.354e-10	38.24	Putative uncharacterized protein OS=Aspergillus te...	[more]
Q5B617_EMENI	6.992e-10	38.24	Putative uncharacterized protein OS=Emericella nid...	[more]
C8V5Q3_EMENI	6.992e-10	38.24	C2H2 transcription factor, putative (AFU_orthologu...	[more]
A2Q837_ASPNC	2.657e-9	37.25	Similarity is restricted to the C2H2-type zinc fin...	[more]
A1D4L1_NEOFI	4.532e-9	37.25	C2H2 type zinc finger domain protein OS=Neosartory...	[more]
Q4WK10_ASPFU	1.010e-8	37.25	C2H2 transcription factor, putative OS=Aspergillus...	[more]

BLAST of GR915037 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT5G56670.1	1.225e-9	70.00	\| Symbols: \| Ribosomal protein S30 family protein...	[more]
AT4G29390.1	1.225e-9	70.00	\| Symbols: \| Ribosomal protein S30 family protein...	[more]
AT2G19750.1	1.225e-9	70.00	\| Symbols: \| Ribosomal protein S30 family protein...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006846	Ribosomal protein S30	PANTHER	PTHR12650	40S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI	coord: 33..73 score: 1.2
IPR006846	Ribosomal protein S30	PFAM	PF04758	Ribosomal_S30	coord: 36..73 score: 8.6
None	No IPR available	SEG	seg	seg	coord: 53..62 score
None	No IPR available	SEG	seg	seg	coord: 21..35 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR915037 ID=GR915037; Name=GR915037; organism=Cicer arietinum; type=EST; length=486bp
GATTTCGAGCGGCCGCCCGGGCAGGTGGTGCTTTCTGCCGCAGCAAGCGA
TCGCAACCAACGGGGAGAGGATTCTGCACAGAAATTCATCGTCACAATCA
TGGGTAAGGTTCACGGTTCACTTGCTCGTGCCGGAAAAGTGAGAGGCCAA
ACACCAAAAGTGGCCAAGCAGGACAAGAAGAAGAAGCCACGTGGCCGTGC
TCACAAGCGTATGCAGTACTAGGACTCTCTGTGTTTATGATGAAGCCGAA
CGAGGTGCATAGTGACTCTGACACAGAGTCATTTGAGTTACTCAACGATA
TTGACTGGACTAATCTATGTGATCCAATGTCAGCAGTAGATATTGCCGGG
GATACTAGTGCCAGTCAGTTTATGCAGAATGGAGGAAGTATTAGCTTCTC
CGGAACAGTTTGTGAAGCGGGATATAATGCTGCCAAGATGATCTTGCTCG
AGTTTGCGAGCTTACTAGAAGAGGTTGGGAAGTGGA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR006846	Ribosomal_eS30

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