GR916807

EST Overview


Name	GR916807
Unique Name	GR916807
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	462

Libraries


Library Name	Type
LIBEST_024969 Early immune responsive suppression subtracted cDNA libraries of Chickpea (Cicer arietinum cv. WR-315) wilt	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR916807 vs. SwissProt
Match: AB17I_ARATH (ABC transporter I family member 17 OS=Arabidopsis thaliana GN=ABCI17 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.234e-13
Identity = 34/49 (69.39%), Postives = 44/49 (89.80%), Query Frame = 3

Query:  156 GMTLIMVSHSIKQIQRMAHVVCLLVDGQIVEVLKPHQLSQAKHPMARRF 302
            G+T ++VSHSIKQIQ++A +VCL+VDG+IVEVLKP +LS A HPMA+RF
Sbjct:  210 GITTVIVSHSIKQIQKVADIVCLVVDGEIVEVLKPSELSHATHPMAQRF 258

[Close]

BLAST of GR916807 vs. SwissProt
Match: NRX3_ARATH (Probable nucleoredoxin 3 OS=Arabidopsis thaliana GN=At4g31240 PE=2 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 1.845e-9
Identity = 35/94 (37.23%), Postives = 51/94 (54.26%), Query Frame = 3

Query:    3 LAWSRPRYEDRTRHDICRIFDIKKIPALVFIGPDGKVISLNGKFMVSSYAGGMTLIMVSHSIKQIQRMAHVVCLLVDGQIVEVLKPHQLSQAKH 284
            + W    YEDRTR D+CRIF++K IPALV IGP+ K ++ N + MVS Y G  +       I +++      CL  +G  +    P ++   KH
Sbjct:  261 MPWLAIPYEDRTRQDLCRIFNVKLIPALVIIGPEEKTVTTNAREMVSLY-GSRSFPFTESRIVELK-----ACLKKEGDSL----PRKVKDNKH 344

[Close]

BLAST of GR916807 vs. TrEMBL
Match: Q9SXT3_CICAR (Multidrug resistance protein (Fragment) OS=Cicer arietinum PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 5.583e-20
Identity = 50/62 (80.65%), Postives = 54/62 (87.10%), Query Frame = 3

Query:  117 SLNGKFMVSSYAGGMTLIMVSHSIKQIQRMAHVVCLLVDGQIVEVLKPHQLSQAKHPMARRF 302
            ++    M  + + GMTLIMVSHSIKQIQRMAHVVCLLVDGQIVEVLKPHQLSQAKHPMARRF
Sbjct:  195 NIEAALMKLNKSQGMTLIMVSHSIKQIQRMAHVVCLLVDGQIVEVLKPHQLSQAKHPMARRF 256

[Close]

BLAST of GR916807 vs. TrEMBL
Match: B7FJ08_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.387e-17
Identity = 46/62 (74.19%), Postives = 52/62 (83.87%), Query Frame = 3

Query:  117 SLNGKFMVSSYAGGMTLIMVSHSIKQIQRMAHVVCLLVDGQIVEVLKPHQLSQAKHPMARRF 302
            ++ G  M  +   GMTLIMVSHSIKQIQRMA VVCL+VDG+IVEVLKP+QLSQA HPMARRF
Sbjct:  189 NIEGALMKLNKNQGMTLIMVSHSIKQIQRMADVVCLVVDGEIVEVLKPNQLSQANHPMARRF 250

[Close]

BLAST of GR916807 vs. TrEMBL
Match: C6TI06_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.681e-16
Identity = 41/49 (83.67%), Postives = 46/49 (93.88%), Query Frame = 3

Query:  156 GMTLIMVSHSIKQIQRMAHVVCLLVDGQIVEVLKPHQLSQAKHPMARRF 302
            GMT+IMVSHSIKQIQR+AH+VCLLVDG+IVEVL PH LSQA HPMA+RF
Sbjct:  104 GMTVIMVSHSIKQIQRIAHIVCLLVDGEIVEVLNPHNLSQANHPMAKRF 152

[Close]

BLAST of GR916807 vs. TrEMBL
Match: B9S7S7_RICCO (Phosphate abc transporter, putative OS=Ricinus communis GN=RCOM_1381510 PE=4 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 5.408e-15
Identity = 38/49 (77.55%), Postives = 48/49 (97.96%), Query Frame = 3

Query:  156 GMTLIMVSHSIKQIQRMAHVVCLLVDGQIVEVLKPHQLSQAKHPMARRF 302
            GMT++MVSHSIKQIQR+A VVCLLV+G++VEVLKP++LS+AKHPMA+RF
Sbjct:  223 GMTIVMVSHSIKQIQRVADVVCLLVNGEVVEVLKPNELSEAKHPMAQRF 271

[Close]

BLAST of GR916807 vs. TrEMBL
Match: B9IN00_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1107359 PE=4 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.020e-13
Identity = 37/49 (75.51%), Postives = 46/49 (93.88%), Query Frame = 3

Query:  156 GMTLIMVSHSIKQIQRMAHVVCLLVDGQIVEVLKPHQLSQAKHPMARRF 302
            G+T+++VSHSIKQIQR+A VVCLLV+G+IVEVLKP  LS+AKHPMA+RF
Sbjct:  219 GLTVVIVSHSIKQIQRIADVVCLLVNGEIVEVLKPDDLSEAKHPMAQRF 267

[Close]

BLAST of GR916807 vs. TrEMBL
Match: D5ADF3_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.272e-13
Identity = 39/49 (79.59%), Postives = 42/49 (85.71%), Query Frame = 3

Query:  156 GMTLIMVSHSIKQIQRMAHVVCLLVDGQIVEVLKPHQLSQAKHPMARRF 302
            GMT+IMVSHS+KQIQR+A VV LLVDGQIVE LKP QLS A HPMAR F
Sbjct:  215 GMTIIMVSHSVKQIQRIADVVFLLVDGQIVETLKPDQLSNANHPMARMF 263

[Close]

BLAST of GR916807 vs. TrEMBL
Match: D7SQD8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_52.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00029255001 PE=4 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.876e-13
Identity = 36/49 (73.47%), Postives = 45/49 (91.84%), Query Frame = 3

Query:  156 GMTLIMVSHSIKQIQRMAHVVCLLVDGQIVEVLKPHQLSQAKHPMARRF 302
            GMT++MVSHSIKQIQR+A  VCLLVDG+I+EVL+P +LS+A+HPMA RF
Sbjct:  215 GMTVVMVSHSIKQIQRIADRVCLLVDGEIIEVLEPDKLSEARHPMALRF 263

[Close]

BLAST of GR916807 vs. TrEMBL
Match: Q5Z8H2_ORYSJ (Putative multidrug resistance protein OS=Oryza sativa subsp. japonica GN=P0622F03.26 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.062e-13
Identity = 35/49 (71.43%), Postives = 44/49 (89.80%), Query Frame = 3

Query:  156 GMTLIMVSHSIKQIQRMAHVVCLLVDGQIVEVLKPHQLSQAKHPMARRF 302
            G+T +MVSHS+KQIQR+A +VCLLV G++VEVL P +LS+AKHPMARRF
Sbjct:  239 GLTTVMVSHSVKQIQRIADLVCLLVAGEVVEVLPPSELSEAKHPMARRF 287

[Close]

BLAST of GR916807 vs. TrEMBL
Match: Q0D9V6_ORYSJ (Os06g0695800 protein OS=Oryza sativa subsp. japonica GN=Os06g0695800 PE=4 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.062e-13
Identity = 35/49 (71.43%), Postives = 44/49 (89.80%), Query Frame = 3

Query:  156 GMTLIMVSHSIKQIQRMAHVVCLLVDGQIVEVLKPHQLSQAKHPMARRF 302
            G+T +MVSHS+KQIQR+A +VCLLV G++VEVL P +LS+AKHPMARRF
Sbjct:  294 GLTTVMVSHSVKQIQRIADLVCLLVAGEVVEVLPPSELSEAKHPMARRF 342

[Close]

BLAST of GR916807 vs. TrEMBL
Match: B9FQN9_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_22488 PE=4 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.062e-13
Identity = 35/49 (71.43%), Postives = 44/49 (89.80%), Query Frame = 3

Query:  156 GMTLIMVSHSIKQIQRMAHVVCLLVDGQIVEVLKPHQLSQAKHPMARRF 302
            G+T +MVSHS+KQIQR+A +VCLLV G++VEVL P +LS+AKHPMARRF
Sbjct:  320 GLTTVMVSHSVKQIQRIADLVCLLVAGEVVEVLPPSELSEAKHPMARRF 368

[Close]

BLAST of GR916807 vs. TAIR peptide
Match: AT1G67940.1 (| Symbols: ATNAP3, AtSTAR1, NAP3 | non-intrinsic ABC protein 3 | chr1:25477805-25478667 FORWARD LENGTH=263)

HSP 1 Score: 75.485 bits (184), Expect = 1.439e-14
Identity = 34/49 (69.39%), Postives = 44/49 (89.80%), Query Frame = 3

Query:  156 GMTLIMVSHSIKQIQRMAHVVCLLVDGQIVEVLKPHQLSQAKHPMARRF 302
            G+T ++VSHSIKQIQ++A +VCL+VDG+IVEVLKP +LS A HPMA+RF
Sbjct:  210 GITTVIVSHSIKQIQKVADIVCLVVDGEIVEVLKPSELSHATHPMAQRF 258

[Close]

BLAST of GR916807 vs. TAIR peptide
Match: AT4G31240.2 (| Symbols: | protein kinase C-like zinc finger protein | chr4:15176637-15177986 REVERSE LENGTH=392)

HSP 1 Score: 61.6178 bits (148), Expect = 2.151e-10
Identity = 35/94 (37.23%), Postives = 51/94 (54.26%), Query Frame = 3

Query:    3 LAWSRPRYEDRTRHDICRIFDIKKIPALVFIGPDGKVISLNGKFMVSSYAGGMTLIMVSHSIKQIQRMAHVVCLLVDGQIVEVLKPHQLSQAKH 284
            + W    YEDRTR D+CRIF++K IPALV IGP+ K ++ N + MVS Y G  +       I +++      CL  +G  +    P ++   KH
Sbjct:  261 MPWLAIPYEDRTRQDLCRIFNVKLIPALVIIGPEEKTVTTNAREMVSLY-GSRSFPFTESRIVELK-----ACLKKEGDSL----PRKVKDNKH 344

[Close]

BLAST of GR916807 vs. TAIR peptide
Match: AT4G31240.1 (| Symbols: | protein kinase C-like zinc finger protein | chr4:15176637-15177986 REVERSE LENGTH=392)

HSP 1 Score: 61.6178 bits (148), Expect = 2.151e-10
Identity = 35/94 (37.23%), Postives = 51/94 (54.26%), Query Frame = 3

Query:    3 LAWSRPRYEDRTRHDICRIFDIKKIPALVFIGPDGKVISLNGKFMVSSYAGGMTLIMVSHSIKQIQRMAHVVCLLVDGQIVEVLKPHQLSQAKH 284
            + W    YEDRTR D+CRIF++K IPALV IGP+ K ++ N + MVS Y G  +       I +++      CL  +G  +    P ++   KH
Sbjct:  261 MPWLAIPYEDRTRQDLCRIFNVKLIPALVIIGPEEKTVTTNAREMVSLY-GSRSFPFTESRIVELK-----ACLKKEGDSL----PRKVKDNKH 344

The following BLAST results are available for this feature:

BLAST of GR916807 vs. SwissProt
BLAST of GR916807 vs. TrEMBL
BLAST of GR916807 vs. TAIR peptide

BLAST of GR916807 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 2


Match Name	E-value	Identity	Description
AB17I_ARATH	1.234e-13	69.39	ABC transporter I family member 17 OS=Arabidopsis ...	[more]
NRX3_ARATH	1.845e-9	37.23	Probable nucleoredoxin 3 OS=Arabidopsis thaliana G...	[more]

BLAST of GR916807 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q9SXT3_CICAR	5.583e-20	80.65	Multidrug resistance protein (Fragment) OS=Cicer a...	[more]
B7FJ08_MEDTR	3.387e-17	74.19	Putative uncharacterized protein OS=Medicago trunc...	[more]
C6TI06_SOYBN	1.681e-16	83.67	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9S7S7_RICCO	5.408e-15	77.55	Phosphate abc transporter, putative OS=Ricinus com...	[more]
B9IN00_POPTR	1.020e-13	75.51	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D5ADF3_PICSI	2.272e-13	79.59	Putative uncharacterized protein OS=Picea sitchens...	[more]
D7SQD8_VITVI	3.876e-13	73.47	Whole genome shotgun sequence of line PN40024, sca...	[more]
Q5Z8H2_ORYSJ	5.062e-13	71.43	Putative multidrug resistance protein OS=Oryza sat...	[more]
Q0D9V6_ORYSJ	5.062e-13	71.43	Os06g0695800 protein OS=Oryza sativa subsp. japoni...	[more]
B9FQN9_ORYSJ	5.062e-13	71.43	Putative uncharacterized protein OS=Oryza sativa s...	[more]

BLAST of GR916807 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT1G67940.1	1.439e-14	69.39	\| Symbols: ATNAP3, AtSTAR1, NAP3 \| non-intrinsic A...	[more]
AT4G31240.2	2.151e-10	37.23	\| Symbols: \| protein kinase C-like zinc finger pr...	[more]
AT4G31240.1	2.151e-10	37.23	\| Symbols: \| protein kinase C-like zinc finger pr...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012335	Thioredoxin fold	GENE3D	3.40.30.10	no description	coord: 3..47 score: 9.1
None	No IPR available	GENE3D	3.40.50.300	no description	coord: 48..102 score: 9.3
None	No IPR available	PANTHER	PTHR13871	THIOREDOXIN	coord: 8..49 score: 2.2
None	No IPR available	PANTHER	PTHR13871:SF2	NUCLEOREDOXIN	coord: 8..49 score: 2.2
None	No IPR available	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 45..102 score: 5.3

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR916807 ID=GR916807; Name=GR916807; organism=Cicer arietinum; type=EST; length=462bp
GATTAGCGTGGTCGCGGCCGAGGTACGAGGACAGAACAAGGCATGACATT
TGTCGAATTTTTGATATAAAGAAAATTCCAGCTTTGGTTTTCATTGGACC
AGACGGCAAAGTAATTAGTTTGAATGGAAAGTTTATGGTCTCGTCGTACG
CGGGGGGCATGACACTCATCATGGTTTCACATAGCATCAAACAAATCCAG
AGGATGGCTCACGTTGTGTGCTTGCTTGTTGATGGTCAAATTGTGGAAGT
TCTTAAACCTCATCAACTATCTCAAGCTAAGCATCCCATGGCACGGAGGT
TTCTTGAACTCAGTAATTAATTAAGCTCACTCTTGTATTGTCTTCACTTG
TGTTGTGGGCTATATTTTATTCTTGCTGCTTGCTTTATCATCAGCTACGT
ATGTTGAGCTGATCCTCATAAATATCACTCAATGGATCGACTTTCGTTAT
TTATTTTGTATG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
IPR012335	Thioredoxin fold

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