HO062177
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of HO062177 vs. TrEMBL
Match: D7MMV6_ARALY (Nitrate transporter NTL1 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_332502 PE=4 SV=1) HSP 1 Score: 51.6026 bits (122), Expect = 3.748e-18 Identity = 23/35 (65.71%), Postives = 26/35 (74.29%), Query Frame = -2 Query: 124 SGNNGHKPWLL-V*FNYYHLEGFYWLMCLLSGLNF 225 +G N H PWLL N YHLE FYWLMC+LSG+NF Sbjct: 514 TGLNHHNPWLLGKNLNQYHLERFYWLMCVLSGINF 548 HSP 2 Score: 51.2174 bits (121), Expect = 3.748e-18 Identity = 27/42 (64.29%), Postives = 31/42 (73.81%), Query Frame = -3 Query: 201 EAPSSMRSLETSLSWVSLALGYYLVQDCVLVNGVLVIMVINH 326 EAPSSMRSL TSLSW SLA+GYYL VLV+ V + +NH Sbjct: 479 EAPSSMRSLATSLSWASLAMGYYL--SSVLVSAVNFVTGLNH 518 HSP 3 Score: 31.9574 bits (71), Expect = 3.748e-18 Identity = 12/16 (75.00%), Postives = 13/16 (81.25%), Query Frame = -1 Query: 86 IEFLHYLYWAVRYKYR 133 I FLHYL+WA RY YR Sbjct: 546 INFLHYLFWASRYVYR 561
BLAST of HO062177 vs. TrEMBL
Match: Q9FM20_ARATH (Nitrate transporter NTL1 OS=Arabidopsis thaliana GN=At5g62730 PE=4 SV=1) HSP 1 Score: 51.6026 bits (122), Expect = 2.295e-17 Identity = 23/35 (65.71%), Postives = 26/35 (74.29%), Query Frame = -2 Query: 124 SGNNGHKPWLL-V*FNYYHLEGFYWLMCLLSGLNF 225 +G N H PWLL N YHLE FYWLMC+LSG+NF Sbjct: 507 TGLNHHNPWLLGENLNQYHLERFYWLMCVLSGINF 541 HSP 2 Score: 48.521 bits (114), Expect = 2.295e-17 Identity = 25/42 (59.52%), Postives = 30/42 (71.43%), Query Frame = -3 Query: 201 EAPSSMRSLETSLSWVSLALGYYLVQDCVLVNGVLVIMVINH 326 EAPS+MRSL TSLSW SLA+GYY VLV+ V + +NH Sbjct: 472 EAPSTMRSLATSLSWASLAMGYYF--SSVLVSAVNFVTGLNH 511 HSP 3 Score: 31.9574 bits (71), Expect = 2.295e-17 Identity = 12/16 (75.00%), Postives = 13/16 (81.25%), Query Frame = -1 Query: 86 IEFLHYLYWAVRYKYR 133 I FLHYL+WA RY YR Sbjct: 539 INFLHYLFWASRYVYR 554
BLAST of HO062177 vs. TrEMBL
Match: Q9CAR8_ARATH (Nitrate transporter (NTL1); 53025-56402 OS=Arabidopsis thaliana GN=T17F3.12 PE=4 SV=1) HSP 1 Score: 46.2098 bits (108), Expect = 5.196e-15 Identity = 24/35 (68.57%), Postives = 27/35 (77.14%), Query Frame = -3 Query: 225 EAPSSMRSLETSLSWVSLALGYYLVQDCV-LVNGV 326 EAPSSMRSL TSLSW SLA+GYYL V +VN + Sbjct: 512 EAPSSMRSLATSLSWASLAMGYYLSSVIVSIVNSI 546 HSP 2 Score: 40.0466 bits (92), Expect = 5.196e-15 Identity = 18/35 (51.43%), Postives = 24/35 (68.57%), Query Frame = -2 Query: 124 SGNNGHKPWLL-V*FNYYHLEGFYWLMCLLSGLNF 225 +G++G+ PWL N Y L+ FYWLMC+LS NF Sbjct: 547 TGSSGNTPWLRGKSINRYKLDYFYWLMCVLSAANF 581 HSP 3 Score: 37.7354 bits (86), Expect = 5.196e-15 Identity = 14/18 (77.78%), Postives = 16/18 (88.89%), Query Frame = -1 Query: 74 FLHYLYWAVRYKYRGRGS 127 FLHYL+WA+RYKYR GS Sbjct: 581 FLHYLFWAMRYKYRSTGS 598
BLAST of HO062177 vs. TrEMBL
Match: Q8W4N9_ARATH (Nitrate transporter (NTL1) OS=Arabidopsis thaliana GN=At1g69850/T17F3.12 PE=2 SV=1) HSP 1 Score: 46.2098 bits (108), Expect = 5.201e-15 Identity = 24/35 (68.57%), Postives = 27/35 (77.14%), Query Frame = -3 Query: 225 EAPSSMRSLETSLSWVSLALGYYLVQDCV-LVNGV 326 EAPSSMRSL TSLSW SLA+GYYL V +VN + Sbjct: 497 EAPSSMRSLATSLSWASLAMGYYLSSVIVSIVNSI 531 HSP 2 Score: 40.0466 bits (92), Expect = 5.201e-15 Identity = 18/35 (51.43%), Postives = 24/35 (68.57%), Query Frame = -2 Query: 124 SGNNGHKPWLL-V*FNYYHLEGFYWLMCLLSGLNF 225 +G++G+ PWL N Y L+ FYWLMC+LS NF Sbjct: 532 TGSSGNTPWLRGKSINRYKLDYFYWLMCVLSAANF 566 HSP 3 Score: 37.7354 bits (86), Expect = 5.201e-15 Identity = 14/18 (77.78%), Postives = 16/18 (88.89%), Query Frame = -1 Query: 74 FLHYLYWAVRYKYRGRGS 127 FLHYL+WA+RYKYR GS Sbjct: 566 FLHYLFWAMRYKYRSTGS 583
BLAST of HO062177 vs. TrEMBL
Match: Q8H157_ARATH (Putative nitrate transporter (NTL1) OS=Arabidopsis thaliana GN=At1g69850 PE=2 SV=1) HSP 1 Score: 46.2098 bits (108), Expect = 5.201e-15 Identity = 24/35 (68.57%), Postives = 27/35 (77.14%), Query Frame = -3 Query: 225 EAPSSMRSLETSLSWVSLALGYYLVQDCV-LVNGV 326 EAPSSMRSL TSLSW SLA+GYYL V +VN + Sbjct: 497 EAPSSMRSLATSLSWASLAMGYYLSSVIVSIVNSI 531 HSP 2 Score: 40.0466 bits (92), Expect = 5.201e-15 Identity = 18/35 (51.43%), Postives = 24/35 (68.57%), Query Frame = -2 Query: 124 SGNNGHKPWLL-V*FNYYHLEGFYWLMCLLSGLNF 225 +G++G+ PWL N Y L+ FYWLMC+LS NF Sbjct: 532 TGSSGNTPWLRGKSINRYKLDYFYWLMCVLSAANF 566 HSP 3 Score: 37.7354 bits (86), Expect = 5.201e-15 Identity = 14/18 (77.78%), Postives = 16/18 (88.89%), Query Frame = -1 Query: 74 FLHYLYWAVRYKYRGRGS 127 FLHYL+WA+RYKYR GS Sbjct: 566 FLHYLFWAMRYKYRSTGS 583
BLAST of HO062177 vs. TrEMBL
Match: O81393_ARATH (Nitrate transporter NTL1 OS=Arabidopsis thaliana GN=NRT1:2 PE=2 SV=1) HSP 1 Score: 46.2098 bits (108), Expect = 5.201e-15 Identity = 24/35 (68.57%), Postives = 27/35 (77.14%), Query Frame = -3 Query: 225 EAPSSMRSLETSLSWVSLALGYYLVQDCV-LVNGV 326 EAPSSMRSL TSLSW SLA+GYYL V +VN + Sbjct: 497 EAPSSMRSLATSLSWASLAMGYYLSSVIVSIVNSI 531 HSP 2 Score: 40.0466 bits (92), Expect = 5.201e-15 Identity = 18/35 (51.43%), Postives = 24/35 (68.57%), Query Frame = -2 Query: 124 SGNNGHKPWLL-V*FNYYHLEGFYWLMCLLSGLNF 225 +G++G+ PWL N Y L+ FYWLMC+LS NF Sbjct: 532 TGSSGNTPWLRGKSINRYKLDYFYWLMCVLSAANF 566 HSP 3 Score: 37.7354 bits (86), Expect = 5.201e-15 Identity = 14/18 (77.78%), Postives = 16/18 (88.89%), Query Frame = -1 Query: 74 FLHYLYWAVRYKYRGRGS 127 FLHYL+WA+RYKYR GS Sbjct: 566 FLHYLFWAMRYKYRSTGS 583
BLAST of HO062177 vs. TrEMBL
Match: D7KXK7_ARALY (ATNRT1:2 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_894780 PE=4 SV=1) HSP 1 Score: 45.0542 bits (105), Expect = 1.129e-14 Identity = 23/35 (65.71%), Postives = 27/35 (77.14%), Query Frame = -3 Query: 225 EAPSSMRSLETSLSWVSLALGYYLVQDCV-LVNGV 326 EAP+SMRSL TSLSW SLA+GYYL V +VN + Sbjct: 478 EAPASMRSLATSLSWASLAMGYYLSSVIVSIVNSI 512 HSP 2 Score: 40.0466 bits (92), Expect = 1.129e-14 Identity = 18/35 (51.43%), Postives = 24/35 (68.57%), Query Frame = -2 Query: 124 SGNNGHKPWLL-V*FNYYHLEGFYWLMCLLSGLNF 225 +G++G+ PWL N Y L+ FYWLMC+LS NF Sbjct: 513 TGSSGNTPWLRGKSINRYKLDYFYWLMCVLSAANF 547 HSP 3 Score: 37.7354 bits (86), Expect = 1.129e-14 Identity = 14/18 (77.78%), Postives = 16/18 (88.89%), Query Frame = -1 Query: 74 FLHYLYWAVRYKYRGRGS 127 FLHYL+WA+RYKYR GS Sbjct: 547 FLHYLFWAMRYKYRSTGS 564
BLAST of HO062177 vs. TrEMBL
Match: B9R944_RICCO (Nitrate transporter, putative OS=Ricinus communis GN=RCOM_1513680 PE=4 SV=1) HSP 1 Score: 45.4394 bits (106), Expect = 1.887e-14 Identity = 20/35 (57.14%), Postives = 24/35 (68.57%), Query Frame = -2 Query: 124 SGNNGHKPWLL-V*FNYYHLEGFYWLMCLLSGLNF 225 +G H WL N+YHLE FYWLMC+LSG+NF Sbjct: 526 TGAYRHTSWLFGSNLNHYHLERFYWLMCILSGINF 560 HSP 2 Score: 44.2838 bits (103), Expect = 1.887e-14 Identity = 24/35 (68.57%), Postives = 26/35 (74.29%), Query Frame = -3 Query: 225 EAPSSMRSLETSLSWVSLALGYYLVQDCV-LVNGV 326 EAP SMRSL TSLSW SLA+GYYL V +VN V Sbjct: 491 EAPLSMRSLATSLSWASLAMGYYLSSVLVSIVNAV 525 HSP 3 Score: 32.3426 bits (72), Expect = 1.887e-14 Identity = 11/23 (47.83%), Postives = 16/23 (69.57%), Query Frame = -1 Query: 65 IEFLHYLYWAVRYKYRGRGSGNE 133 I FLHYL+W+ RY+Y+ +E Sbjct: 558 INFLHYLFWSCRYRYKSTSPRDE 580
BLAST of HO062177 vs. TrEMBL
Match: D7SIG5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00008064001 PE=4 SV=1) HSP 1 Score: 44.669 bits (104), Expect = 2.439e-14 Identity = 21/36 (58.33%), Postives = 22/36 (61.11%), Query Frame = -2 Query: 124 WCSGNNGHKPWLLV*FNYYHLEGFYWLMCLLSGLNF 231 W GNN N+YHLE FYWLMC LSGLNF Sbjct: 565 WLFGNN---------LNHYHLEKFYWLMCGLSGLNF 591 HSP 2 Score: 44.2838 bits (103), Expect = 2.439e-14 Identity = 23/35 (65.71%), Postives = 27/35 (77.14%), Query Frame = -3 Query: 225 EAPSSMRSLETSLSWVSLALGYYLVQDCV-LVNGV 326 EAP+SMRSL T+LSW SLA+GYYL V +VN V Sbjct: 522 EAPTSMRSLATALSWASLAMGYYLSSVLVSIVNSV 556 HSP 3 Score: 32.7278 bits (73), Expect = 2.439e-14 Identity = 13/22 (59.09%), Postives = 14/22 (63.64%), Query Frame = -1 Query: 68 IEFLHYLYWAVRYKYRGRGSGN 133 + FLHYL WA RYKYR N Sbjct: 589 LNFLHYLLWASRYKYRTASPDN 610
BLAST of HO062177 vs. TrEMBL
Match: B9S2C4_RICCO (Nitrate transporter, putative OS=Ricinus communis GN=RCOM_0698270 PE=4 SV=1) HSP 1 Score: 45.8246 bits (107), Expect = 5.337e-14 Identity = 21/24 (87.50%), Postives = 22/24 (91.67%), Query Frame = -3 Query: 255 EAPSSMRSLETSLSWVSLALGYYL 326 EAPSSMRSL TSLSW SLA+GYYL Sbjct: 385 EAPSSMRSLATSLSWASLAMGYYL 408 HSP 2 Score: 44.669 bits (104), Expect = 5.337e-14 Identity = 20/35 (57.14%), Postives = 24/35 (68.57%), Query Frame = -2 Query: 124 SGNNGHKPWLL-V*FNYYHLEGFYWLMCLLSGLNF 225 +GN H PWL N+Y LE FYWLMC+LS +NF Sbjct: 420 TGNYKHHPWLSGSNINHYQLERFYWLMCVLSAVNF 454 HSP 3 Score: 30.0314 bits (66), Expect = 5.337e-14 Identity = 11/22 (50.00%), Postives = 14/22 (63.64%), Query Frame = -1 Query: 68 IEFLHYLYWAVRYKYRGRGSGN 133 + FLHYL+W YKYR + N Sbjct: 452 VNFLHYLFWTNWYKYRSTRATN 473
BLAST of HO062177 vs. TAIR peptide
Match: AT5G62730.1 (| Symbols: | Major facilitator superfamily protein | chr5:25197494-25200033 FORWARD LENGTH=589) HSP 1 Score: 51.6026 bits (122), Expect = 9.126e-20 Identity = 23/35 (65.71%), Postives = 26/35 (74.29%), Query Frame = -2 Query: 124 SGNNGHKPWLL-V*FNYYHLEGFYWLMCLLSGLNF 225 +G N H PWLL N YHLE FYWLMC+LSG+NF Sbjct: 538 TGLNHHNPWLLGENLNQYHLERFYWLMCVLSGINF 572 HSP 2 Score: 48.521 bits (114), Expect = 9.126e-20 Identity = 25/42 (59.52%), Postives = 30/42 (71.43%), Query Frame = -3 Query: 201 EAPSSMRSLETSLSWVSLALGYYLVQDCVLVNGVLVIMVINH 326 EAPS+MRSL TSLSW SLA+GYY VLV+ V + +NH Sbjct: 503 EAPSTMRSLATSLSWASLAMGYYF--SSVLVSAVNFVTGLNH 542 HSP 3 Score: 31.9574 bits (71), Expect = 9.126e-20 Identity = 12/16 (75.00%), Postives = 13/16 (81.25%), Query Frame = -1 Query: 86 IEFLHYLYWAVRYKYR 133 I FLHYL+WA RY YR Sbjct: 570 INFLHYLFWASRYVYR 585
BLAST of HO062177 vs. TAIR peptide
Match: AT1G69850.1 (| Symbols: ATNRT1:2, NTL1, NRT1:2 | nitrate transporter 1:2 | chr1:26296945-26300407 REVERSE LENGTH=585) HSP 1 Score: 46.2098 bits (108), Expect = 2.072e-17 Identity = 24/35 (68.57%), Postives = 27/35 (77.14%), Query Frame = -3 Query: 225 EAPSSMRSLETSLSWVSLALGYYLVQDCV-LVNGV 326 EAPSSMRSL TSLSW SLA+GYYL V +VN + Sbjct: 497 EAPSSMRSLATSLSWASLAMGYYLSSVIVSIVNSI 531 HSP 2 Score: 40.0466 bits (92), Expect = 2.072e-17 Identity = 18/35 (51.43%), Postives = 24/35 (68.57%), Query Frame = -2 Query: 124 SGNNGHKPWLL-V*FNYYHLEGFYWLMCLLSGLNF 225 +G++G+ PWL N Y L+ FYWLMC+LS NF Sbjct: 532 TGSSGNTPWLRGKSINRYKLDYFYWLMCVLSAANF 566 HSP 3 Score: 37.7354 bits (86), Expect = 2.072e-17 Identity = 14/18 (77.78%), Postives = 16/18 (88.89%), Query Frame = -1 Query: 74 FLHYLYWAVRYKYRGRGS 127 FLHYL+WA+RYKYR GS Sbjct: 566 FLHYLFWAMRYKYRSTGS 583
BLAST of HO062177 vs. TAIR peptide
Match: AT1G27040.1 (| Symbols: | Major facilitator superfamily protein | chr1:9386893-9390018 REVERSE LENGTH=567) HSP 1 Score: 46.595 bits (109), Expect = 1.279e-15 Identity = 22/24 (91.67%), Postives = 22/24 (91.67%), Query Frame = -3 Query: 255 EAPSSMRSLETSLSWVSLALGYYL 326 EAPSSMRSL TSLSW SLALGYYL Sbjct: 480 EAPSSMRSLATSLSWASLALGYYL 503 HSP 2 Score: 36.5798 bits (83), Expect = 1.279e-15 Identity = 16/30 (53.33%), Postives = 19/30 (63.33%), Query Frame = -2 Query: 124 GHKPWLLV*FNYYHLEGFYWLMCLLSGLNF 213 G PWL N L+ FYWLMC+LS +NF Sbjct: 519 GQSPWLGEKLNRNRLDLFYWLMCVLSVVNF 548 HSP 3 Score: 34.6538 bits (78), Expect = 1.279e-15 Identity = 13/20 (65.00%), Postives = 15/20 (75.00%), Query Frame = -1 Query: 74 IEFLHYLYWAVRYKYRGRGS 133 + FLHYL+WA RYKY GS Sbjct: 546 VNFLHYLFWAKRYKYISTGS 565
BLAST of HO062177 vs. TAIR peptide
Match: AT1G27040.2 (| Symbols: | Major facilitator superfamily protein | chr1:9386893-9389838 REVERSE LENGTH=563) HSP 1 Score: 46.595 bits (109), Expect = 1.279e-15 Identity = 22/24 (91.67%), Postives = 22/24 (91.67%), Query Frame = -3 Query: 255 EAPSSMRSLETSLSWVSLALGYYL 326 EAPSSMRSL TSLSW SLALGYYL Sbjct: 476 EAPSSMRSLATSLSWASLALGYYL 499 HSP 2 Score: 36.5798 bits (83), Expect = 1.279e-15 Identity = 16/30 (53.33%), Postives = 19/30 (63.33%), Query Frame = -2 Query: 124 GHKPWLLV*FNYYHLEGFYWLMCLLSGLNF 213 G PWL N L+ FYWLMC+LS +NF Sbjct: 515 GQSPWLGEKLNRNRLDLFYWLMCVLSVVNF 544 HSP 3 Score: 34.6538 bits (78), Expect = 1.279e-15 Identity = 13/20 (65.00%), Postives = 15/20 (75.00%), Query Frame = -1 Query: 74 IEFLHYLYWAVRYKYRGRGS 133 + FLHYL+WA RYKY GS Sbjct: 542 VNFLHYLFWAKRYKYISTGS 561 The following BLAST results are available for this feature:
BLAST of HO062177 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of HO062177 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 4
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >HO062177 ID=HO062177; Name=HO062177; organism=Cicer arietinum; type=EST; length=328bpback to top |