HO066308

EST Overview


Name	HO066308
Unique Name	HO066308
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	576

Libraries


Library Name	Type
LIBEST_026413 Chickpea drought stressed cDNA SSH library AS2	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of HO066308 vs. SwissProt
Match: RBS3_PEA (Ribulose bisphosphate carboxylase small chain 3A, chloroplastic OS=Pisum sativum GN=RBCS-3A PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.291e-22
Identity = 48/56 (85.71%), Postives = 51/56 (91.07%), Query Frame = 1

Query:  208 YWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQCISFIAHTPK 375
            YWTMWKLP+FG T+A QVLKEL EVV AYP AFVRIIGFDNVRQVQCISFIAHTP+
Sbjct:  123 YWTMWKLPMFGTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPE 178

[Close]

BLAST of HO066308 vs. SwissProt
Match: RBS2_PEA (Ribulose bisphosphate carboxylase small chain 3C, chloroplastic OS=Pisum sativum GN=RBCS-3C PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.291e-22
Identity = 48/56 (85.71%), Postives = 51/56 (91.07%), Query Frame = 1

Query:  208 YWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQCISFIAHTPK 375
            YWTMWKLP+FG T+A QVLKEL EVV AYP AFVRIIGFDNVRQVQCISFIAHTP+
Sbjct:  123 YWTMWKLPMFGTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPE 178

[Close]

BLAST of HO066308 vs. SwissProt
Match: RBS_GLYTA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Glycine tabacina GN=RBCS PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 7.332e-22
Identity = 46/55 (83.64%), Postives = 50/55 (90.91%), Query Frame = 1

Query:  208 YWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQCISFIAHTP 372
            YWTMWKLP+FGCT+A QVLKELQE   AYPNAF+RIIGFDNVRQVQCISFIA+ P
Sbjct:  121 YWTMWKLPMFGCTDASQVLKELQEAKTAYPNAFIRIIGFDNVRQVQCISFIAYKP 175

[Close]

BLAST of HO066308 vs. SwissProt
Match: RBS2_PETHY (Ribulose bisphosphate carboxylase small chain SSU11A, chloroplastic OS=Petunia hybrida GN=RBCS PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.634e-21
Identity = 47/61 (77.05%), Postives = 53/61 (86.89%), Query Frame = 1

Query:  196 RFYG--YWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQCISFIAHTP 372
            R+Y   YWTMWKLP+FGCT+A QVL ELQE  KAYPNA++RIIGFDNVRQVQCISFIA+ P
Sbjct:  117 RYYDGRYWTMWKLPMFGCTDATQVLGELQEAKKAYPNAWIRIIGFDNVRQVQCISFIAYKP 177

[Close]

BLAST of HO066308 vs. SwissProt
Match: RBS1_PETHY (Ribulose bisphosphate carboxylase small chain SSU8, chloroplastic OS=Petunia hybrida GN=RBCS PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.634e-21
Identity = 47/61 (77.05%), Postives = 53/61 (86.89%), Query Frame = 1

Query:  196 RFYG--YWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQCISFIAHTP 372
            R+Y   YWTMWKLP+FGCT+A QVL ELQE  KAYPNA++RIIGFDNVRQVQCISFIA+ P
Sbjct:  117 RYYDGRYWTMWKLPMFGCTDATQVLGELQEAKKAYPNAWIRIIGFDNVRQVQCISFIAYKP 177

[Close]

BLAST of HO066308 vs. SwissProt
Match: RBS4_SOYBN (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Glycine max GN=RBCS-4 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.133e-21
Identity = 45/55 (81.82%), Postives = 49/55 (89.09%), Query Frame = 1

Query:  208 YWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQCISFIAHTP 372
            YWTMWKLP+FGCT+A QVLKELQE   AYPN F+RIIGFDNVRQVQCISFIA+ P
Sbjct:  121 YWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKP 175

[Close]

BLAST of HO066308 vs. SwissProt
Match: RBS1_SOYBN (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Glycine max GN=RBCS-1 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.133e-21
Identity = 45/55 (81.82%), Postives = 49/55 (89.09%), Query Frame = 1

Query:  208 YWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQCISFIAHTP 372
            YWTMWKLP+FGCT+A QVLKELQE   AYPN F+RIIGFDNVRQVQCISFIA+ P
Sbjct:  121 YWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKP 175

[Close]

BLAST of HO066308 vs. SwissProt
Match: RBS_GLYTO (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Glycine tomentella GN=RBCS PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.786e-21
Identity = 45/55 (81.82%), Postives = 49/55 (89.09%), Query Frame = 1

Query:  208 YWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQCISFIAHTP 372
            YWTMWKLP+FGCT+A QVLKELQE   AYPN F+RIIGFDNVRQVQCISFIA+ P
Sbjct:  121 YWTMWKLPVFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKP 175

[Close]

BLAST of HO066308 vs. SwissProt
Match: RBS_LARLA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Larix laricina GN=RBCS PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.639e-21
Identity = 43/56 (76.79%), Postives = 48/56 (85.71%), Query Frame = 1

Query:  208 YWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQCISFIAHTPK 375
            YW MWKLP+FGCTEA QVL E+ E  KAYPNAF+R+IGFDNVRQVQCISFI H P+
Sbjct:  132 YWVMWKLPMFGCTEASQVLNEVNECAKAYPNAFIRVIGFDNVRQVQCISFIVHKPE 187

[Close]

BLAST of HO066308 vs. SwissProt
Match: RBS_HEVBR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Hevea brasiliensis GN=RBCS PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.639e-21
Identity = 43/56 (76.79%), Postives = 52/56 (92.86%), Query Frame = 1

Query:  208 YWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQCISFIAHTPK 375
            YWTMWKLP+FGCT+AVQVL+EL E++KAYP+ + RIIGFDNVRQVQCISF+A+ PK
Sbjct:  125 YWTMWKLPMFGCTDAVQVLQELDEMIKAYPDCYGRIIGFDNVRQVQCISFLAYKPK 180

[Close]

BLAST of HO066308 vs. TrEMBL
Match: Q9ZP07_CICAR (Ribulose bisphosphate carboxylase small chain OS=Cicer arietinum PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.171e-26
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 1

Query:  208 YWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQCISFIAHTPK 375
            YWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQCISFIAHTPK
Sbjct:  124 YWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQCISFIAHTPK 179

[Close]

BLAST of HO066308 vs. TrEMBL
Match: B7FMC2_MEDTR (Ribulose bisphosphate carboxylase small chain OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.406e-22
Identity = 50/56 (89.29%), Postives = 52/56 (92.86%), Query Frame = 1

Query:  208 YWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQCISFIAHTPK 375
            YWTMWKLPLFG T+A QVLKEL EVV AYPNAFVRIIGFDNVRQVQCISFIAHTP+
Sbjct:  124 YWTMWKLPLFGATDASQVLKELDEVVVAYPNAFVRIIGFDNVRQVQCISFIAHTPE 179

[Close]

BLAST of HO066308 vs. TrEMBL
Match: B9T1N0_RICCO (Ribulose bisphosphate carboxylase small chain OS=Ricinus communis GN=RCOM_1158790 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.054e-21
Identity = 46/55 (83.64%), Postives = 52/55 (94.55%), Query Frame = 1

Query:  208 YWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQCISFIAHTP 372
            YWTMWKLP+FGC++AVQVLKEL E +KAYPN+FVRIIGFDNVRQVQCISFIA+ P
Sbjct:  125 YWTMWKLPMFGCSDAVQVLKELDEAIKAYPNSFVRIIGFDNVRQVQCISFIAYKP 179

[Close]

BLAST of HO066308 vs. TrEMBL
Match: Q9ZRI4_PEA (Ribulose bisphosphate carboxylase small chain (Fragment) OS=Pisum sativum GN=RuBP PE=2 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 4.576e-21
Identity = 48/56 (85.71%), Postives = 51/56 (91.07%), Query Frame = 1

Query:  208 YWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQCISFIAHTPK 375
            YWTMWKLP+FG T+A QVLKEL EVV AYP AFVRIIGFDNVRQVQCISFIAHTP+
Sbjct:   82 YWTMWKLPMFGTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPE 137

[Close]

BLAST of HO066308 vs. TrEMBL
Match: A0A3A2_ARTAN (Ribulose bisphosphate carboxylase small chain (Fragment) OS=Artemisia annua PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.271e-20
Identity = 44/54 (81.48%), Postives = 49/54 (90.74%), Query Frame = 1

Query:  211 WTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQCISFIAHTP 372
            WTMWKLP+FGCT++ QV+KELQE  K YPNAF+RIIGFDNVRQVQCISFIAH P
Sbjct:   34 WTMWKLPMFGCTDSAQVMKELQEAKKEYPNAFIRIIGFDNVRQVQCISFIAHKP 87

[Close]

BLAST of HO066308 vs. TrEMBL
Match: Q9FUJ5_SOYBN (Ribulose bisphosphate carboxylase small chain OS=Glycine max PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.966e-20
Identity = 45/55 (81.82%), Postives = 49/55 (89.09%), Query Frame = 1

Query:  208 YWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQCISFIAHTP 372
            YWTMWKLP+FGCT+A QVLKELQE   AYPN F+RIIGFDNVRQVQCISFIA+ P
Sbjct:  121 YWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKP 175

[Close]

BLAST of HO066308 vs. TrEMBL
Match: Q9FUJ4_SOYBN (Ribulose bisphosphate carboxylase small chain OS=Glycine max PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 2.966e-20
Identity = 45/55 (81.82%), Postives = 49/55 (89.09%), Query Frame = 1

Query:  208 YWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQCISFIAHTP 372
            YWTMWKLP+FGCT+A QVLKELQE   AYPN F+RIIGFDNVRQVQCISFIA+ P
Sbjct:  121 YWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKP 175

[Close]

BLAST of HO066308 vs. TrEMBL
Match: Q39832_SOYBN (Ribulose bisphosphate carboxylase small chain OS=Glycine max PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.966e-20
Identity = 45/55 (81.82%), Postives = 49/55 (89.09%), Query Frame = 1

Query:  208 YWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQCISFIAHTP 372
            YWTMWKLP+FGCT+A QVLKELQE   AYPN F+RIIGFDNVRQVQCISFIA+ P
Sbjct:  121 YWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKP 175

[Close]

BLAST of HO066308 vs. TrEMBL
Match: C6T1Y2_SOYBN (Ribulose bisphosphate carboxylase small chain OS=Glycine max PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.966e-20
Identity = 45/55 (81.82%), Postives = 49/55 (89.09%), Query Frame = 1

Query:  208 YWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQCISFIAHTP 372
            YWTMWKLP+FGCT+A QVLKELQE   AYPN F+RIIGFDNVRQVQCISFIA+ P
Sbjct:  121 YWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKP 175

[Close]

BLAST of HO066308 vs. TrEMBL
Match: C6SVL2_SOYBN (Ribulose bisphosphate carboxylase small chain OS=Glycine max PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.966e-20
Identity = 45/55 (81.82%), Postives = 49/55 (89.09%), Query Frame = 1

Query:  208 YWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQCISFIAHTP 372
            YWTMWKLP+FGCT+A QVLKELQE   AYPN F+RIIGFDNVRQVQCISFIA+ P
Sbjct:  121 YWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKP 175

[Close]

BLAST of HO066308 vs. TAIR peptide
Match: AT1G67090.1 (| Symbols: RBCS1A | ribulose bisphosphate carboxylase small chain 1A | chr1:25048465-25049249 REVERSE LENGTH=180)

HSP 1 Score: 100.138 bits (248), Expect = 8.595e-22
Identity = 43/55 (78.18%), Postives = 49/55 (89.09%), Query Frame = 1

Query:  208 YWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQCISFIAHTP 372
            YWTMWKLPLFGCT++ QVLKE++E  K YPNAF+RIIGFDN RQVQCISFIA+ P
Sbjct:  121 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPNAFIRIIGFDNTRQVQCISFIAYKP 175

[Close]

BLAST of HO066308 vs. TAIR peptide
Match: AT5G38410.3 (| Symbols: | Ribulose bisphosphate carboxylase (small chain) family protein | chr5:15377501-15378306 REVERSE LENGTH=186)

HSP 1 Score: 97.8265 bits (242), Expect = 4.265e-21
Identity = 42/55 (76.36%), Postives = 48/55 (87.27%), Query Frame = 1

Query:  208 YWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQCISFIAHTP 372
            YWTMWKLPLFGCT++ QVLKE++E  K YP AF+RIIGFDN RQVQCISFIA+ P
Sbjct:  126 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKP 180

[Close]

BLAST of HO066308 vs. TAIR peptide
Match: AT5G38410.2 (| Symbols: | Ribulose bisphosphate carboxylase (small chain) family protein | chr5:15377501-15378306 REVERSE LENGTH=174)

HSP 1 Score: 97.8265 bits (242), Expect = 4.265e-21
Identity = 42/55 (76.36%), Postives = 48/55 (87.27%), Query Frame = 1

Query:  208 YWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQCISFIAHTP 372
            YWTMWKLPLFGCT++ QVLKE++E  K YP AF+RIIGFDN RQVQCISFIA+ P
Sbjct:  114 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKP 168

[Close]

BLAST of HO066308 vs. TAIR peptide
Match: AT5G38410.1 (| Symbols: | Ribulose bisphosphate carboxylase (small chain) family protein | chr5:15377501-15378306 REVERSE LENGTH=181)

HSP 1 Score: 97.8265 bits (242), Expect = 4.265e-21
Identity = 42/55 (76.36%), Postives = 48/55 (87.27%), Query Frame = 1

Query:  208 YWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQCISFIAHTP 372
            YWTMWKLPLFGCT++ QVLKE++E  K YP AF+RIIGFDN RQVQCISFIA+ P
Sbjct:  121 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKP 175

[Close]

BLAST of HO066308 vs. TAIR peptide
Match: AT5G38420.1 (| Symbols: | Ribulose bisphosphate carboxylase (small chain) family protein | chr5:15381203-15381978 REVERSE LENGTH=181)

HSP 1 Score: 97.8265 bits (242), Expect = 4.265e-21
Identity = 42/55 (76.36%), Postives = 48/55 (87.27%), Query Frame = 1

Query:  208 YWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQCISFIAHTP 372
            YWTMWKLPLFGCT++ QVLKE++E  K YP AF+RIIGFDN RQVQCISFIA+ P
Sbjct:  121 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKP 175

[Close]

BLAST of HO066308 vs. TAIR peptide
Match: AT5G38430.1 (| Symbols: | Ribulose bisphosphate carboxylase (small chain) family protein | chr5:15384350-15385155 REVERSE LENGTH=181)

HSP 1 Score: 97.8265 bits (242), Expect = 4.265e-21
Identity = 42/55 (76.36%), Postives = 48/55 (87.27%), Query Frame = 1

Query:  208 YWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQCISFIAHTP 372
            YWTMWKLPLFGCT++ QVLKE++E  K YP AF+RIIGFDN RQVQCISFIA+ P
Sbjct:  121 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKP 175

The following BLAST results are available for this feature:

BLAST of HO066308 vs. SwissProt
BLAST of HO066308 vs. TrEMBL
BLAST of HO066308 vs. TAIR peptide

BLAST of HO066308 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RBS3_PEA	3.291e-22	85.71	Ribulose bisphosphate carboxylase small chain 3A, ...	[more]
RBS2_PEA	3.291e-22	85.71	Ribulose bisphosphate carboxylase small chain 3C, ...	[more]
RBS_GLYTA	7.332e-22	83.64	Ribulose bisphosphate carboxylase small chain, chl...	[more]
RBS2_PETHY	1.634e-21	77.05	Ribulose bisphosphate carboxylase small chain SSU1...	[more]
RBS1_PETHY	1.634e-21	77.05	Ribulose bisphosphate carboxylase small chain SSU8...	[more]
RBS4_SOYBN	2.133e-21	81.82	Ribulose bisphosphate carboxylase small chain 4, c...	[more]
RBS1_SOYBN	2.133e-21	81.82	Ribulose bisphosphate carboxylase small chain 1, c...	[more]
RBS_GLYTO	2.786e-21	81.82	Ribulose bisphosphate carboxylase small chain, chl...	[more]
RBS_LARLA	3.639e-21	76.79	Ribulose bisphosphate carboxylase small chain, chl...	[more]
RBS_HEVBR	3.639e-21	76.79	Ribulose bisphosphate carboxylase small chain, chl...	[more]

BLAST of HO066308 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q9ZP07_CICAR	6.171e-26	100.00	Ribulose bisphosphate carboxylase small chain OS=C...	[more]
B7FMC2_MEDTR	5.406e-22	89.29	Ribulose bisphosphate carboxylase small chain OS=M...	[more]
B9T1N0_RICCO	2.054e-21	83.64	Ribulose bisphosphate carboxylase small chain OS=R...	[more]
Q9ZRI4_PEA	4.576e-21	85.71	Ribulose bisphosphate carboxylase small chain (Fra...	[more]
A0A3A2_ARTAN	2.271e-20	81.48	Ribulose bisphosphate carboxylase small chain (Fra...	[more]
Q9FUJ5_SOYBN	2.966e-20	81.82	Ribulose bisphosphate carboxylase small chain OS=G...	[more]
Q9FUJ4_SOYBN	2.966e-20	81.82	Ribulose bisphosphate carboxylase small chain OS=G...	[more]
Q39832_SOYBN	2.966e-20	81.82	Ribulose bisphosphate carboxylase small chain OS=G...	[more]
C6T1Y2_SOYBN	2.966e-20	81.82	Ribulose bisphosphate carboxylase small chain OS=G...	[more]
C6SVL2_SOYBN	2.966e-20	81.82	Ribulose bisphosphate carboxylase small chain OS=G...	[more]

BLAST of HO066308 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 6


Match Name	E-value	Identity	Description
AT1G67090.1	8.595e-22	78.18	\| Symbols: RBCS1A \| ribulose bisphosphate carboxyl...	[more]
AT5G38410.3	4.265e-21	76.36	\| Symbols: \| Ribulose bisphosphate carboxylase (s...	[more]
AT5G38410.2	4.265e-21	76.36	\| Symbols: \| Ribulose bisphosphate carboxylase (s...	[more]
AT5G38410.1	4.265e-21	76.36	\| Symbols: \| Ribulose bisphosphate carboxylase (s...	[more]
AT5G38420.1	4.265e-21	76.36	\| Symbols: \| Ribulose bisphosphate carboxylase (s...	[more]
AT5G38430.1	4.265e-21	76.36	\| Symbols: \| Ribulose bisphosphate carboxylase (s...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000894	Ribulose bisphosphate carboxylase, small chain	PRINTS	PR00152	RUBISCOSMALL	coord: 12..41 score: 2.3e-23coord: 46..72 score: 2.3
IPR000894	Ribulose bisphosphate carboxylase, small chain	GENE3D	3.30.190.10	no description	coord: 17..74 score: 5
IPR000894	Ribulose bisphosphate carboxylase, small chain	PFAM	PF00101	RuBisCO_small	coord: 17..72 score: 2.3
IPR000894	Ribulose bisphosphate carboxylase, small chain	SMART	SM00961	no description	coord: 1..72 score: 2
IPR000894	Ribulose bisphosphate carboxylase, small chain	SUPERFAMILY	55239	RuBisCO, small subunit	coord: 18..75 score: 1.8

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>HO066308 ID=HO066308; Name=HO066308; organism=Cicer arietinum; type=EST; length=576bp
AGCGTGGTCGCGGCCGAGGTACGCGGGTGACCCTAATATATGGAATGCTG
TCATGCAAAACCCTGCAGTCACTAGTTTCTTCGAATCACAGCTAGCAGCG
GTGGAATCAACAAATGGTGCTGCAATTGCTGGTTCTGGAACAGTAGAAAC
TCCTGAAAAAGAGGAAAATCACGAGTCTCACTTGGAAAATGGTTTCGATT
TTATGGGTACTGGACAATGTGGAAGCTTCCATTGTTTGGTTGCACTGAGG
CTGTTCAAGTGTTGAAGGAACTTCAGGAAGTTGTCAAGGCTTACCCTAAT
GCTTTCGTCCGCATCATCGGATTCGACAACGTTCGCCAAGTGCAGTGCAT
CAGTTTCATTGCACACACACCTAAAGAGTTCTAAGTTTGAGTATTAACTC
TCTTGGAAGAATCATTTATTTTCTCCCATTTGTTATGCTTGTAATTTCCT
TTTCTTCTTCAAAGGAGTGTCCTCCTTTGTTTTTTCGGTTTTTACTTTCG
GACTTCAAATGCAAATGGATGGATAAGAGTTAATAAATGAAATGGTCCTT
TTATTCATTCTCAAAGTACCTGCCCG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Biological Process**
Term	Definition
GO:0015977	carbon fixation

Vocabulary: **Molecular Function**
Term	Definition
GO:0016984	ribulose-bisphosphate carboxylase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR024681	RuBisCO_ssu

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