HO067044

EST Overview


Name	HO067044
Unique Name	HO067044
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	515

Libraries


Library Name	Type
LIBEST_026413 Chickpea drought stressed cDNA SSH library AS2	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of HO067044 vs. SwissProt
Match: ATPG_TOBAC (ATP synthase gamma chain, chloroplastic OS=Nicotiana tabacum GN=ATPC PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.297e-23
Identity = 59/79 (74.68%), Postives = 62/79 (78.48%), Query Frame = -2

Query:  248 QFEQDPVQILDALLPLYLSSQIXXXXXXXXXXXXXXRMSAMSNATDNAVELKKNLSRXYNRERQAKIXGEILEIVAGAD 484
            QFEQDPVQILDALLPLYL+SQI              RMSAMS+ATDNA ELKKNLSR YNR+RQAKI GEILEIVAGAD
Sbjct:  296 QFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSSATDNATELKKNLSRVYNRQRQAKITGEILEIVAGAD 374

[Close]

BLAST of HO067044 vs. SwissProt
Match: ATPG_MAIZE (ATP synthase subunit gamma, chloroplastic OS=Zea mays PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.945e-22
Identity = 57/79 (72.15%), Postives = 62/79 (78.48%), Query Frame = -2

Query:  248 QFEQDPVQILDALLPLYLSSQIXXXXXXXXXXXXXXRMSAMSNATDNAVELKKNLSRXYNRERQAKIXGEILEIVAGAD 484
            QFEQDPVQILDALLPLYL+SQI              RMSAMS+ATDNA+EL+KNLS  YNR+RQAKI GEILEIVAGAD
Sbjct:  277 QFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSSATDNAIELRKNLSIAYNRQRQAKITGEILEIVAGAD 355

[Close]

BLAST of HO067044 vs. SwissProt
Match: ATPG2_ARATH (ATP synthase gamma chain 2, chloroplastic OS=Arabidopsis thaliana GN=ATPC2 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.647e-21
Identity = 54/79 (68.35%), Postives = 61/79 (77.22%), Query Frame = -2

Query:  248 QFEQDPVQILDALLPLYLSSQIXXXXXXXXXXXXXXRMSAMSNATDNAVELKKNLSRXYNRERQAKIXGEILEIVAGAD 484
            QFEQDPVQILDA++PLYL+SQI              RM+AMSNATDNAVELKKNL+  YNR RQAKI GE+LEIVAGA+
Sbjct:  303 QFEQDPVQILDAMMPLYLNSQILRALQESLASELASRMNAMSNATDNAVELKKNLTMAYNRARQAKITGELLEIVAGAE 381

[Close]

BLAST of HO067044 vs. SwissProt
Match: ATPG1_ARATH (ATP synthase gamma chain 1, chloroplastic OS=Arabidopsis thaliana GN=ATPC1 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.378e-20
Identity = 54/79 (68.35%), Postives = 61/79 (77.22%), Query Frame = -2

Query:  248 QFEQDPVQILDALLPLYLSSQIXXXXXXXXXXXXXXRMSAMSNATDNAVELKKNLSRXYNRERQAKIXGEILEIVAGAD 484
            QFEQDPVQILDALLPLYL+SQI              RMSAMS+A+DNA +LKK+LS  YNR+RQAKI GEILEIVAGA+
Sbjct:  292 QFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSSASDNASDLKKSLSMVYNRKRQAKITGEILEIVAGAN 370

[Close]

BLAST of HO067044 vs. SwissProt
Match: ATPG_SPIOL (ATP synthase gamma chain, chloroplastic OS=Spinacia oleracea GN=ATPC PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 6.918e-20
Identity = 54/79 (68.35%), Postives = 58/79 (73.42%), Query Frame = -2

Query:  248 QFEQDPVQILDALLPLYLSSQIXXXXXXXXXXXXXXRMSAMSNATDNAVELKKNLSRXYNRERQAKIXGEILEIVAGAD 484
            +FEQDP QILDALLPLYL+SQI              RM+AMSNATDNA ELKK LS  YNR RQAKI GEILEIVAGA+
Sbjct:  283 EFEQDPAQILDALLPLYLNSQILRALQESLASELAARMTAMSNATDNANELKKTLSINYNRARQAKITGEILEIVAGAN 361

[Close]

BLAST of HO067044 vs. SwissProt
Match: ATPG_PEA (ATP synthase gamma chain, chloroplastic OS=Pisum sativum GN=ATPC PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.704e-18
Identity = 52/77 (67.53%), Postives = 56/77 (72.73%), Query Frame = -2

Query:  254 QFEQDPVQILDALLPLYLSSQIXXXXXXXXXXXXXXRMSAMSNATDNAVELKKNLSRXYNRERQAKIXGEILEIVAG 484
            QFEQDPVQILDALLPLYL+SQI              RMSAMS+A DNA ELK +L+R YNR  QAKI GEILEIVAG
Sbjct:  293 QFEQDPVQILDALLPLYLNSQILRPLQESLASELAARMSAMSSAFDNASELKTDLTRVYNRATQAKITGEILEIVAG 369

[Close]

BLAST of HO067044 vs. SwissProt
Match: ATPG_SYNJA (ATP synthase gamma chain OS=Synechococcus sp. (strain JA-3-3Ab) GN=atpG PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 7.915e-16
Identity = 45/78 (57.69%), Postives = 54/78 (69.23%), Query Frame = -2

Query:  248 FEQDPVQILDALLPLYLSSQIXXXXXXXXXXXXXXRMSAMSNATDNAVELKKNLSRXYNRERQAKIXGEILEIVAGAD 481
            FEQDPVQILDALLPLYL++Q+              RM+AMSNA+DNA EL + L   YN+ RQA I  EILE+VAGA+
Sbjct:  235 FEQDPVQILDALLPLYLNNQLLRALQEAAASELAARMTAMSNASDNATELIRTLGLAYNKARQAAITQEILEVVAGAE 312

[Close]

BLAST of HO067044 vs. SwissProt
Match: ATPG_ANAVT (ATP synthase gamma chain OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=atpG PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.034e-15
Identity = 45/78 (57.69%), Postives = 55/78 (70.51%), Query Frame = -2

Query:  248 FEQDPVQILDALLPLYLSSQIXXXXXXXXXXXXXXRMSAMSNATDNAVELKKNLSRXYNRERQAKIXGEILEIVAGAD 481
            FEQDPVQILD+LLPLYLS+Q+              RM+AMSNA+DNA EL K+LS  YN+ RQA I  E+LE+V GA+
Sbjct:  235 FEQDPVQILDSLLPLYLSNQLLRALQESAASELAARMTAMSNASDNAGELIKSLSLSYNKARQAAITQELLEVVGGAE 312

[Close]

BLAST of HO067044 vs. SwissProt
Match: ATPG_CYAP4 (ATP synthase gamma chain OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=atpG PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.303e-15
Identity = 44/78 (56.41%), Postives = 54/78 (69.23%), Query Frame = -2

Query:  248 FEQDPVQILDALLPLYLSSQIXXXXXXXXXXXXXXRMSAMSNATDNAVELKKNLSRXYNRERQAKIXGEILEIVAGAD 481
            FEQDP+QILDALLPLYL++Q+              RM+AM+NA+DNA EL K LS  YN+ RQA I  EILE+V GA+
Sbjct:  235 FEQDPLQILDALLPLYLNNQLLRALQESAASELAARMTAMNNASDNAKELIKGLSMTYNKARQAAITQEILEVVGGAE 312

[Close]

BLAST of HO067044 vs. SwissProt
Match: ATPG_SYNJB (ATP synthase gamma chain OS=Synechococcus sp. GN=atpG PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.008e-15
Identity = 44/78 (56.41%), Postives = 54/78 (69.23%), Query Frame = -2

Query:  248 FEQDPVQILDALLPLYLSSQIXXXXXXXXXXXXXXRMSAMSNATDNAVELKKNLSRXYNRERQAKIXGEILEIVAGAD 481
            FEQDPVQILDALLPLYL++Q+              RM+AM+NA+DNA EL + L   YN+ RQA I  EILE+VAGA+
Sbjct:  235 FEQDPVQILDALLPLYLNNQLLRALQEAAASELAARMTAMNNASDNASELIRTLGLAYNKARQAAITQEILEVVAGAE 312

[Close]

BLAST of HO067044 vs. TrEMBL
Match: C6TES6_SOYBN (ATP synthase gamma chain OS=Glycine max PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 8.498e-22
Identity = 58/82 (70.73%), Postives = 62/82 (75.61%), Query Frame = -2

Query:  239 QFEQDPVQILDALLPLYLSSQIXXXXXXXXXXXXXXRMSAMSNATDNAVELKKNLSRXYNRERQAKIXGEILEIVAGADXXQ 484
            QFEQDPVQILDALLPLYL+SQ+              RMSAMSNATDN +ELKKNLS  YNRERQAKI GEILEIVAGA+  Q
Sbjct:  287 QFEQDPVQILDALLPLYLNSQVLRALQESLASELAARMSAMSNATDNTIELKKNLSIVYNRERQAKITGEILEIVAGANALQ 368

[Close]

BLAST of HO067044 vs. TrEMBL
Match: Q84NW1_ORYSJ (ATP synthase gamma chain OS=Oryza sativa subsp. japonica GN=OSJNBb0041J06.115 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.450e-21
Identity = 57/79 (72.15%), Postives = 62/79 (78.48%), Query Frame = -2

Query:  248 QFEQDPVQILDALLPLYLSSQIXXXXXXXXXXXXXXRMSAMSNATDNAVELKKNLSRXYNRERQAKIXGEILEIVAGAD 484
            QFEQDPVQILDALLPLYL+SQI              RMSAMS+ATDNA+EL+KNLS  YNR+RQAKI GEILEIVAGAD
Sbjct:  277 QFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSSATDNAIELRKNLSMVYNRQRQAKITGEILEIVAGAD 355

[Close]

BLAST of HO067044 vs. TrEMBL
Match: B9FXH0_ORYSJ (ATP synthase gamma chain OS=Oryza sativa subsp. japonica GN=OsJ_24423 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.450e-21
Identity = 57/79 (72.15%), Postives = 62/79 (78.48%), Query Frame = -2

Query:  248 QFEQDPVQILDALLPLYLSSQIXXXXXXXXXXXXXXRMSAMSNATDNAVELKKNLSRXYNRERQAKIXGEILEIVAGAD 484
            QFEQDPVQILDALLPLYL+SQI              RMSAMS+ATDNA+EL+KNLS  YNR+RQAKI GEILEIVAGAD
Sbjct:  253 QFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSSATDNAIELRKNLSMVYNRQRQAKITGEILEIVAGAD 331

[Close]

BLAST of HO067044 vs. TrEMBL
Match: B7FIR4_MEDTR (ATP synthase gamma chain OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.450e-21
Identity = 57/79 (72.15%), Postives = 62/79 (78.48%), Query Frame = -2

Query:  248 QFEQDPVQILDALLPLYLSSQIXXXXXXXXXXXXXXRMSAMSNATDNAVELKKNLSRXYNRERQAKIXGEILEIVAGAD 484
            QFEQDPVQILDALLPLYL+SQI              RM+AMS+A DNA+ELKKNLSR YNR+RQAKI GEILEIVAGAD
Sbjct:  293 QFEQDPVQILDALLPLYLNSQILRALQESLASELAARMTAMSSACDNAIELKKNLSRVYNRQRQAKITGEILEIVAGAD 371

[Close]

BLAST of HO067044 vs. TrEMBL
Match: A2YLT1_ORYSI (ATP synthase gamma chain OS=Oryza sativa subsp. indica GN=OsI_26177 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.450e-21
Identity = 57/79 (72.15%), Postives = 62/79 (78.48%), Query Frame = -2

Query:  248 QFEQDPVQILDALLPLYLSSQIXXXXXXXXXXXXXXRMSAMSNATDNAVELKKNLSRXYNRERQAKIXGEILEIVAGAD 484
            QFEQDPVQILDALLPLYL+SQI              RMSAMS+ATDNA+EL+KNLS  YNR+RQAKI GEILEIVAGAD
Sbjct:  277 QFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSSATDNAIELRKNLSMVYNRQRQAKITGEILEIVAGAD 355

[Close]

BLAST of HO067044 vs. TrEMBL
Match: C0PNN7_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.473e-21
Identity = 57/79 (72.15%), Postives = 62/79 (78.48%), Query Frame = -2

Query:  248 QFEQDPVQILDALLPLYLSSQIXXXXXXXXXXXXXXRMSAMSNATDNAVELKKNLSRXYNRERQAKIXGEILEIVAGAD 484
            QFEQDPVQILDALLPLYL+SQI              RMSAMS+ATDNA+EL+KNLS  YNR+RQAKI GEILEIVAGAD
Sbjct:   51 QFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSSATDNAIELRKNLSIAYNRQRQAKITGEILEIVAGAD 129

[Close]

BLAST of HO067044 vs. TrEMBL
Match: B9H1A7_POPTR (ATP synthase gamma chain OS=Populus trichocarpa GN=POPTRDRAFT_555320 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.473e-21
Identity = 58/79 (73.42%), Postives = 61/79 (77.22%), Query Frame = -2

Query:  248 QFEQDPVQILDALLPLYLSSQIXXXXXXXXXXXXXXRMSAMSNATDNAVELKKNLSRXYNRERQAKIXGEILEIVAGAD 484
            QFEQDPVQILDALLPLYL+SQI              RMSAMSNATDNA ELKK+LS  YNR+RQAKI GEILEIVAGAD
Sbjct:  294 QFEQDPVQILDALLPLYLNSQILKALQESLASELAARMSAMSNATDNASELKKSLSMVYNRQRQAKITGEILEIVAGAD 372

[Close]

BLAST of HO067044 vs. TrEMBL
Match: B6TUD4_MAIZE (ATP synthase gamma chain OS=Zea mays PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.473e-21
Identity = 57/79 (72.15%), Postives = 62/79 (78.48%), Query Frame = -2

Query:  248 QFEQDPVQILDALLPLYLSSQIXXXXXXXXXXXXXXRMSAMSNATDNAVELKKNLSRXYNRERQAKIXGEILEIVAGAD 484
            QFEQDPVQILDALLPLYL+SQI              RMSAMS+ATDNA+EL+KNLS  YNR+RQAKI GEILEIVAGAD
Sbjct:  277 QFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSSATDNAIELRKNLSIAYNRQRQAKITGEILEIVAGAD 355

[Close]

BLAST of HO067044 vs. TrEMBL
Match: A9PJJ6_9ROSI (ATP synthase gamma chain OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.473e-21
Identity = 58/79 (73.42%), Postives = 61/79 (77.22%), Query Frame = -2

Query:  248 QFEQDPVQILDALLPLYLSSQIXXXXXXXXXXXXXXRMSAMSNATDNAVELKKNLSRXYNRERQAKIXGEILEIVAGAD 484
            QFEQDPVQILDALLPLYL+SQI              RMSAMSNATDNA ELKK+LS  YNR+RQAKI GEILEIVAGAD
Sbjct:  294 QFEQDPVQILDALLPLYLNSQILKALQESLASELAARMSAMSNATDNASELKKSLSMVYNRQRQAKITGEILEIVAGAD 372

[Close]

BLAST of HO067044 vs. TrEMBL
Match: B9HZK6_POPTR (ATP synthase gamma chain OS=Populus trichocarpa GN=POPTRDRAFT_771072 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.229e-21
Identity = 57/79 (72.15%), Postives = 61/79 (77.22%), Query Frame = -2

Query:  248 QFEQDPVQILDALLPLYLSSQIXXXXXXXXXXXXXXRMSAMSNATDNAVELKKNLSRXYNRERQAKIXGEILEIVAGAD 484
            QFEQDPVQILDALLPLYL+SQI              RM AMSNATDNAVELKK+LS  YNRERQAKI GE+LEI+AGAD
Sbjct:  289 QFEQDPVQILDALLPLYLNSQILKALQESLASELAARMCAMSNATDNAVELKKSLSIIYNRERQAKITGELLEIIAGAD 367

[Close]

BLAST of HO067044 vs. TAIR peptide
Match: AT1G15700.1 (| Symbols: ATPC2 | ATPase, F1 complex, gamma subunit protein | chr1:5402629-5403789 REVERSE LENGTH=386)

HSP 1 Score: 102.064 bits (253), Expect = 1.830e-22
Identity = 54/79 (68.35%), Postives = 61/79 (77.22%), Query Frame = -2

Query:  248 QFEQDPVQILDALLPLYLSSQIXXXXXXXXXXXXXXRMSAMSNATDNAVELKKNLSRXYNRERQAKIXGEILEIVAGAD 484
            QFEQDPVQILDA++PLYL+SQI              RM+AMSNATDNAVELKKNL+  YNR RQAKI GE+LEIVAGA+
Sbjct:  303 QFEQDPVQILDAMMPLYLNSQILRALQESLASELASRMNAMSNATDNAVELKKNLTMAYNRARQAKITGELLEIVAGAE 381

[Close]

BLAST of HO067044 vs. TAIR peptide
Match: AT4G04640.1 (| Symbols: ATPC1 | ATPase, F1 complex, gamma subunit protein | chr4:2350761-2351882 REVERSE LENGTH=373)

HSP 1 Score: 98.2117 bits (243), Expect = 2.643e-21
Identity = 54/79 (68.35%), Postives = 61/79 (77.22%), Query Frame = -2

Query:  248 QFEQDPVQILDALLPLYLSSQIXXXXXXXXXXXXXXRMSAMSNATDNAVELKKNLSRXYNRERQAKIXGEILEIVAGAD 484
            QFEQDPVQILDALLPLYL+SQI              RMSAMS+A+DNA +LKK+LS  YNR+RQAKI GEILEIVAGA+
Sbjct:  292 QFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSSASDNASDLKKSLSMVYNRKRQAKITGEILEIVAGAN 370

The following BLAST results are available for this feature:

BLAST of HO067044 vs. SwissProt
BLAST of HO067044 vs. TrEMBL
BLAST of HO067044 vs. TAIR peptide

BLAST of HO067044 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
ATPG_TOBAC	2.297e-23	74.68	ATP synthase gamma chain, chloroplastic OS=Nicotia...	[more]
ATPG_MAIZE	1.945e-22	72.15	ATP synthase subunit gamma, chloroplastic OS=Zea m...	[more]
ATPG2_ARATH	1.647e-21	68.35	ATP synthase gamma chain 2, chloroplastic OS=Arabi...	[more]
ATPG1_ARATH	2.378e-20	68.35	ATP synthase gamma chain 1, chloroplastic OS=Arabi...	[more]
ATPG_SPIOL	6.918e-20	68.35	ATP synthase gamma chain, chloroplastic OS=Spinaci...	[more]
ATPG_PEA	1.704e-18	67.53	ATP synthase gamma chain, chloroplastic OS=Pisum s...	[more]
ATPG_SYNJA	7.915e-16	57.69	ATP synthase gamma chain OS=Synechococcus sp. (str...	[more]
ATPG_ANAVT	1.034e-15	57.69	ATP synthase gamma chain OS=Anabaena variabilis (s...	[more]
ATPG_CYAP4	2.303e-15	56.41	ATP synthase gamma chain OS=Cyanothece sp. (strain...	[more]
ATPG_SYNJB	3.008e-15	56.41	ATP synthase gamma chain OS=Synechococcus sp. GN=a...	[more]

BLAST of HO067044 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6TES6_SOYBN	8.498e-22	70.73	ATP synthase gamma chain OS=Glycine max PE=2 SV=1	[more]
Q84NW1_ORYSJ	1.450e-21	72.15	ATP synthase gamma chain OS=Oryza sativa subsp. ja...	[more]
B9FXH0_ORYSJ	1.450e-21	72.15	ATP synthase gamma chain OS=Oryza sativa subsp. ja...	[more]
B7FIR4_MEDTR	1.450e-21	72.15	ATP synthase gamma chain OS=Medicago truncatula PE...	[more]
A2YLT1_ORYSI	1.450e-21	72.15	ATP synthase gamma chain OS=Oryza sativa subsp. in...	[more]
C0PNN7_MAIZE	2.473e-21	72.15	Putative uncharacterized protein OS=Zea mays PE=2 ...	[more]
B9H1A7_POPTR	2.473e-21	73.42	ATP synthase gamma chain OS=Populus trichocarpa GN...	[more]
B6TUD4_MAIZE	2.473e-21	72.15	ATP synthase gamma chain OS=Zea mays PE=2 SV=1	[more]
A9PJJ6_9ROSI	2.473e-21	73.42	ATP synthase gamma chain OS=Populus trichocarpa x ...	[more]
B9HZK6_POPTR	3.229e-21	72.15	ATP synthase gamma chain OS=Populus trichocarpa GN...	[more]

BLAST of HO067044 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT1G15700.1	1.830e-22	68.35	\| Symbols: ATPC2 \| ATPase, F1 complex, gamma subun...	[more]
AT4G04640.1	2.643e-21	68.35	\| Symbols: ATPC1 \| ATPase, F1 complex, gamma subun...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 55..65 score: NAcoord: 85..98 score
None	No IPR available	SEG	seg	seg	coord: 17..28 score
None	No IPR available	GENE3D	1.10.287.80	no description	coord: 11..89 score: 4.1
None	No IPR available	PANTHER	PTHR11693:SF9	ATP SYNTHASE GAMMA CHAIN 2, CHLOROPLAST	coord: 11..92 score: 8.5
None	No IPR available	SEG	seg	seg	coord: 33..47 score
IPR000131	ATPase, F1 complex, gamma subunit	PRINTS	PR00126	ATPASEGAMMA	coord: 38..57 score: 2.6e-17coord: 69..90 score: 2.6
IPR000131	ATPase, F1 complex, gamma subunit	PANTHER	PTHR11693	ATP SYNTHASE GAMMA CHAIN	coord: 11..92 score: 8.5
IPR000131	ATPase, F1 complex, gamma subunit	PFAM	PF00231	ATP-synt	coord: 11..89 score: 7.1
IPR000131	ATPase, F1 complex, gamma subunit	SUPERFAMILY	52943	ATP synthase (F1-ATPase), gamma subunit	coord: 12..92 score: 1.1

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>HO067044 ID=HO067044; Name=HO067044; organism=Cicer arietinum; type=EST; length=515bp
ACTTCATCANAATAAATTGCAGTTTTCCTAGGACAAAAAGTTTGCNCATT
AGGAAAAGACAATAAATTTGNAAAATTTGCATGCATAGCATAACAGTCTT
ATACAAGCATATTTATATAGAGAGAATGAAAAGGGCAATGNTCATTATAA
AAATTACCTACAAAGAAATCCAACTTCCAAGTTCCAACCATGGATGAGAG
AAATAGAACAGCCCTTATATAATATAATACACAATCTATTGNAAGGNATC
AGCTCCAGCAACAATTTCAAGAATTTCNCCAGNGATCTTTGCCTGACGTT
CCCGATTATACNCCCTCGACAAGTTCTTCTTCAACTCAACAGCATTATCA
GTAGCATTACTCATAGCACTCATCCTAGCAGCTAATTCACTAGCAAGNGA
TTCCTGCAACGCCCTCAAGATTTGACTGCTCAAATAAAGNGGCAAAAGNG
CGTCAAGAATTTGAACAGGATCCTGCTCAAACTGCCCCGCGTACCTGCCC
GGGNGGCCGCTCGAA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Biological Process**
Term	Definition
GO:0015986	proton motive force-driven ATP synthesis

Vocabulary: **INTERPRO**
Term	Definition
IPR000131	ATP_synth_F1_gsu

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