CK148917

EST Overview
NameCK148917
Unique NameCK148917
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length610
Libraries
Library NameType
LIBEST_014674 Suppressive subtractive hybridization librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of CK148917 vs. TrEMBL
Match: B9RA66_RICCO (RNA-binding protein, putative OS=Ricinus communis GN=RCOM_1503540 PE=4 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 7.211e-27
Identity = 70/183 (38.25%), Postives = 103/183 (56.28%), Query Frame = 1
Query:   73 KHLKFVEFYDVXXXXXXXXXXNRIDIAGKQIKLEPGHPS----LMQQTHKGQDERDLGHSIIDNMSLRQKPTLSSGVIGSGFLDNGYSQRFQSAMRQPLNAFIDNNAFFSTDSSVHNTVRGASIGK---VSESRNLVDAMKFASS--PTFHPHSLPEYHGSFANGSSYNFSSTISDKAGNIGA 594
            +H KF+E+YD+          NR DIAGKQIKLEP  P     LM +  + QDE  L  S  +++S  +  T S GVI S  ++NG +Q   SA++ P+ +FI+++   S  +++ + V   SI K   + E    +D M F +   P+FHPHSLPEY    ANG  +N SS+I   A ++G+
Sbjct:  394 RHHKFIEYYDIRSAEAALSALNRSDIAGKQIKLEPSRPGGTRRLMTKPEQEQDESGLCQSPFEDLSSGRLATFSPGVIASSCMENGSTQVIHSAIQSPVGSFIESHRSSSVPNNLPSPVSVTSISKQFGLHEPNRSMDEMMFGNQRIPSFHPHSLPEYPDGLANGVPFNSSSSIGGMAHSVGS 576          

HSP 2 Score: 25.0238 bits (53), Expect = 7.211e-27
Identity = 11/14 (78.57%), Postives = 11/14 (78.57%), Query Frame = 2
Query:   11 LKHIFGFYGEIKEI 52
            L  IFG YGEIKEI
Sbjct:  374 LHKIFGVYGEIKEI 387          
BLAST of CK148917 vs. TrEMBL
Match: B9IFK9_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_252991 PE=4 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 5.949e-26
Identity = 71/172 (41.28%), Postives = 94/172 (54.65%), Query Frame = 1
Query:   76 HLKFVEFYDVXXXXXXXXXXNRIDIAGKQIKLEPGHP----SLMQQTHKGQDERDLGHSIIDNMSLRQKPTLSSGVIGSGFLDNGYSQRFQSAMRQPLNAFIDNNAFFSTDSSVHNTVRGASIGKVSESRNLVDAMKFASS--PTFHPHSLPEYHGSFANGSSYNFSSTISD 573
            H KFVE+YD+          NR D+AGKQIK+E  HP    SLMQQ    Q ER+L  S  +++S     T S GV  S ++ NG SQ   SA+   L AF + +   S  +++ + V  ++  + S     +D MKF +   P+ HPHSLPEYH SFAN   YN  STI D
Sbjct:  343 HHKFVEYYDIRAAEAALSALNRSDVAGKQIKIESSHPGGTRSLMQQPEHEQAERNLLQSPFNDLSSGPLATFSPGVSASSYMANGSSQVLHSAIPSQLGAFAELHRSSSVSNNLPSPVTASAAKQFS-----IDEMKFGNKCIPSIHPHSLPEYHDSFANTIPYNSPSTIRD 509          

HSP 2 Score: 26.1794 bits (56), Expect = 5.949e-26
Identity = 10/14 (71.43%), Postives = 12/14 (85.71%), Query Frame = 2
Query:   11 LKHIFGFYGEIKEI 52
            L+ IFG YGEIKE+
Sbjct:  321 LRQIFGVYGEIKEV 334          
BLAST of CK148917 vs. TrEMBL
Match: D7SH76_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00008646001 PE=4 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.310e-25
Identity = 80/189 (42.33%), Postives = 102/189 (53.97%), Query Frame = 1
Query:   73 KHLKFVEFYDVXXXXXXXXXXNRIDIAGKQIKLEPGHPS-----LMQ--QTHKGQDERDLGHSIIDNMSLRQKPTLSSGVIGSGFLDNGYSQRFQSAMRQPLNAFIDNNAFFSTDSSVHNTV----RGASIGK---VSESRNLVDAMKFA--SSPTFHPHSLPEYHGSFANGSSYNFSSTISDKAGNIG 591
            +H KF+EF+DV          NR DIAGK+IKLEP  P      LMQ   +   QDE  L  S  DN+S      +S G+  S  +DN   Q   SA+R P+ +F++N A     SSV NT+    R  SI     + E+ N +D MKF   S P +HPHSLPEYH + AN   YN SSTI D  G++G
Sbjct:  401 RHHKFIEFFDVRAAEAALRALNRSDIAGKRIKLEPSRPGGSRRCLMQLCSSELEQDESILCQSPDDNLSSGCM-AVSPGIKTSSCMDNVSIQDLHSAVRMPIGSFVEN-ATSHGSSSVPNTLPSPMRVVSIINEFGLGETSNTLDQMKFGNQSFPNYHPHSLPEYHDNLANAIRYNSSSTIGDMTGHVG 587          

HSP 2 Score: 26.9498 bits (58), Expect = 1.310e-25
Identity = 11/14 (78.57%), Postives = 12/14 (85.71%), Query Frame = 2
Query:   11 LKHIFGFYGEIKEI 52
            L+ IFG YGEIKEI
Sbjct:  381 LRQIFGIYGEIKEI 394          
BLAST of CK148917 vs. TrEMBL
Match: B9NEE0_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_828903 PE=4 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 8.994e-20
Identity = 63/172 (36.63%), Postives = 86/172 (50.00%), Query Frame = 1
Query:   76 HLKFVEFYDVXXXXXXXXXXNRIDIAGKQIKLEPGHP----SLMQQTHKGQDERDLGHSIIDNMSLRQKPTLSSGVIGSGFLDNGYSQRFQSAMRQPLNAFIDNNAFFSTDSSVHNTVRGASIGKVSESRNLVDAMKFASS--PTFHPHSLPEYHGSFANGSSYNFSSTISD 573
            H KF+E+YD+          NR DIAGKQIK+E   P    SLMQQ+   Q E         ++      T S GV  S +++N  +Q   SA+   L AF D +   S   ++ + V  ++  ++S     +  MKF +   P+ HPHSLPEYH S AN  SYN   TI D
Sbjct:   70 HDKFIEYYDIRDADAALSALNRSDIAGKQIKVESSLPGGTRSLMQQSEHKQTEPHPFQRPFKDLLSGSLATFSPGVSASSYMENRSTQVLHSAIPSQLGAFTDLHRSSSVSINLPSPVTASAAKQIS-----ISEMKFGNQCIPSTHPHSLPEYHDSLANTISYNSPGTIRD 236          

HSP 2 Score: 25.409 bits (54), Expect = 8.994e-20
Identity = 11/14 (78.57%), Postives = 11/14 (78.57%), Query Frame = 2
Query:   11 LKHIFGFYGEIKEI 52
            L  IFG YGEIKEI
Sbjct:   49 LHQIFGVYGEIKEI 62          
BLAST of CK148917 vs. TrEMBL
Match: D7TFI4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_150.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00001086001 PE=4 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 3.729e-17
Identity = 61/183 (33.33%), Postives = 85/183 (46.45%), Query Frame = 1
Query:   76 HLKFVEFYDVXXXXXXXXXXNRIDIAGKQIKLEPGHPS----LMQQTHKGQDERDLGHSIIDNMSLRQKPT-----LSSGVIGSGFLDNGYSQRFQSAMRQPLNAFIDNNAFFSTDSSVHNTVRG-ASIGKVSESRNLVDAMK--------FASSPTFHPHSLPEYHGSFANGSSYNFSSTIS 570
            H KFVEFYD+          NR DIAGK+IKLEP  P     LMQQ     +E + G  +  N +     T      S G I S  ++NG      S +  P+  F++N +     SSV NT+    S+  V     L ++ +        F  + + HPHSLPEY+   ANG+  N   T++
Sbjct:  393 HHKFVEFYDIRAAEAALRALNRSDIAGKRIKLEPSRPGGARRLMQQFPSELEEDESGLYLQQNNTPNNSTTGFPGPASLGAITSSSMENGTIMGVHSGIPFPIRPFLENVSHHGISSSVPNTLPSLLSVESVGSQSGLAESSRSQGQLKFDFRGTQSLHPHSLPEYNDGLANGAPCNPVGTMA 575          

HSP 2 Score: 25.0238 bits (53), Expect = 3.729e-17
Identity = 11/14 (78.57%), Postives = 11/14 (78.57%), Query Frame = 2
Query:   11 LKHIFGFYGEIKEI 52
            L  IFG YGEIKEI
Sbjct:  372 LLQIFGVYGEIKEI 385          
BLAST of CK148917 vs. TrEMBL
Match: A5BN23_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040729 PE=4 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.066e-16
Identity = 61/187 (32.62%), Postives = 85/187 (45.45%), Query Frame = 1
Query:   76 HLKFVEFYDVXXXXXXXXXXNRIDIAGKQIKLEPGHPS----LMQQTHKGQDERDLGHSIIDNMSLRQKPT---------LSSGVIGSGFLDNGYSQRFQSAMRQPLNAFIDNNAFFSTDSSVHNTVRG-ASIGKVSESRNLVDAMK--------FASSPTFHPHSLPEYHGSFANGSSYNFSSTIS 570
            H KFVEFYD+          NR DIAGK+IKLEP  P     LMQQ     +E + G  +  N +     T          S G I S  ++NG      S +  P+  F++N +     SSV NT+    S+  V     L ++ +        F  + + HPHSLPEY+   ANG+  N   T++
Sbjct:  346 HHKFVEFYDIRAAEAALRALNRSDIAGKRIKLEPSRPGGARRLMQQFPSELEEDESGLYLQQNNTPNNSTTGFPALLTGPASLGAITSSSMENGTIMGVHSGIPFPIRPFLENVSHHGISSSVPNTLPSLLSVESVGSQSGLAESSRSQGQLKFDFRGTQSLHPHSLPEYNDGLANGAPCNPVGTMA 532          

HSP 2 Score: 25.0238 bits (53), Expect = 1.066e-16
Identity = 11/14 (78.57%), Postives = 11/14 (78.57%), Query Frame = 2
Query:   11 LKHIFGFYGEIKEI 52
            L  IFG YGEIKEI
Sbjct:  325 LLQIFGVYGEIKEI 338          
BLAST of CK148917 vs. TrEMBL
Match: Q6J732_SOLLC (AML1 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.125e-13
Identity = 54/171 (31.58%), Postives = 78/171 (45.61%), Query Frame = 1
Query:   76 HLKFVEFYDVXXXXXXXXXXNRIDIAGKQIKLEPGHPS---LMQQTHKGQDERDLGHSIIDNMSLRQKPTLSSGVIGSG----FLDNGYSQRFQSAMRQPLNAFIDNNAFFSTDSSVHNTV-----RGASIGKVSESRNLVDAMKFASSPT--FHPHSLPEYHGSFANGSS 546
            H K++EFYDV          NR D+AGKQI +E  HP     + Q    + E+D     +   S     T  SG +  G     ++NG     QSA    +N+++DN        SV N++     +G +   V E+ +L     F    T   HPHSLPEYH   +NG++
Sbjct:  395 HHKYIEFYDVRAAEAALRALNRSDVAGKQIMIEAIHPGGTRRLSQQFPSELEQDEPGLYLHQNSPSSLATGFSGALPHGGHGLSMENGSILGRQSASGSAMNSYLDNAFDCGLSFSVPNSLLRLESKGGNQANVGETGHLQSQFNFDLRGTSGLHPHSLPEYHDGLSNGTT 565          

HSP 2 Score: 26.5646 bits (57), Expect = 2.125e-13
Identity = 11/14 (78.57%), Postives = 12/14 (85.71%), Query Frame = 2
Query:   11 LKHIFGFYGEIKEI 52
            L+ IFG YGEIKEI
Sbjct:  374 LRQIFGVYGEIKEI 387          
BLAST of CK148917 vs. TrEMBL
Match: B9GZ23_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_554690 PE=4 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.902e-12
Identity = 53/165 (32.12%), Postives = 74/165 (44.85%), Query Frame = 1
Query:   76 HLKFVEFYDVXXXXXXXXXXNRIDIAGKQIKLEPGHPS----LMQQTHKGQDERDLGHSIIDNMSLRQKPTLSSGVIGSGFLDNGYSQRFQSAMRQPLNAFIDNNAFFSTDSSVHNTVRGASIGKVSESRNLVDAMKFASSP-----------TFHPHSLPEYHG 525
            H KFVEFYDV          N+ DIAGK+IKLE   P     L+ Q     ++ + G  +  +       T  SG + S  +DNG      SA + P   F ++       SSV N++  +S+ +V  + N     + + SP            FHPHSLPEY G
Sbjct:  400 HHKFVEFYDVRAAEAALHALNKSDIAGKRIKLEASCPGGLRRLLHQIPPELEQDEFGPFVQQSSPPNNSTTEFSGTVISTGMDNGPILGAHSATQAP---FFESALHHGISSSVPNSM--SSLSRVESAGNQTGFAELSHSPGHLKFDIQSTLNFHPHSLPEYDG 559          

HSP 2 Score: 26.5646 bits (57), Expect = 2.902e-12
Identity = 11/14 (78.57%), Postives = 12/14 (85.71%), Query Frame = 2
Query:   11 LKHIFGFYGEIKEI 52
            L+ IFG YGEIKEI
Sbjct:  379 LRRIFGVYGEIKEI 392          
BLAST of CK148917 vs. TrEMBL
Match: D7M0H6_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_660590 PE=4 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.456e-10
Identity = 50/171 (29.24%), Postives = 77/171 (45.03%), Query Frame = 1
Query:   85 FVEFYDVXXXXXXXXXXNRIDIAGKQIKLEPGHP---SLMQQTHKGQDERDLGHSIIDNMSLRQKPTLSSGVIGSGFLDNGYSQRFQSAMRQPLNAFIDNNAFFSTDSSVHNTVRGASIGK---VSESRNLVDAMK--FASSPTFHPHSLPEYHGSFANGSSYNFSSTISD 573
            ++EF+DV          N +++AG+Q+KL P  P   S   Q      E  L     +N+S         G++ S  +D G  +   +++  P+N+FI+ +        +  + R  S  K   + E  N  D  K    S P  HPH  PEY  +FA+GS Y  SST S+
Sbjct:  332 YIEFFDVRKAEVALQGLNGLEVAGRQLKLAPTCPEGTSFSPQFAADDGEGGLPKMAFNNLSSAHMGRHFPGILASTSIDGGSIRVMHNSVGSPMNSFIERHQSLDVPIGLPPSARVISASKPVGLQEFGNPFDNSKTGIHSMPNLHPH-FPEYLDNFASGSPYKSSSTFSE 501          
BLAST of CK148917 vs. TrEMBL
Match: Q9LYN7_ARATH (Mei2-like protein OS=Arabidopsis thaliana GN=T28J14_230 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.472e-10
Identity = 48/171 (28.07%), Postives = 77/171 (45.03%), Query Frame = 1
Query:   85 FVEFYDVXXXXXXXXXXNRIDIAGKQIKLEPGHP---SLMQQTHKGQDERDLGHSIIDNMSLRQKPTLSSGVIGSGFLDNGYSQRFQSAMRQPLNAFIDNNAFFSTDSSVHNTVRGASIGK---VSESRNLVDAMK--FASSPTFHPHSLPEYHGSFANGSSYNFSSTISD 573
            ++EF+DV          N +++AG+Q+KL P  P   S   Q      E  L     +N+S         G++ S  +D G  +   +++  P+N+FI+ +        +  + R  S  K   + E  N  D  K    S P  HPH  P+Y  +FA+GS Y  S+T S+
Sbjct:  335 YIEFFDVRKAKVALQGLNGLEVAGRQLKLAPTCPEGTSFWPQFASDDGEGGLPKMAFNNLSSAHMGRHFPGILASTSIDGGSIRGMHNSVGSPMNSFIERHQSLDVPIGLPPSARVISASKPVGLQEFGNPFDNSKTGIQSMPNLHPH-FPDYLDNFASGSPYKSSTTFSE 504          
BLAST of CK148917 vs. TAIR peptide
Match: AT5G07290.1 (| Symbols: AML4, ML4 | MEI2-like 4 | chr5:2294248-2298491 FORWARD LENGTH=907)

HSP 1 Score: 68.1662 bits (165), Expect = 4.030e-12
Identity = 48/171 (28.07%), Postives = 77/171 (45.03%), Query Frame = 1
Query:   85 FVEFYDVXXXXXXXXXXNRIDIAGKQIKLEPGHP---SLMQQTHKGQDERDLGHSIIDNMSLRQKPTLSSGVIGSGFLDNGYSQRFQSAMRQPLNAFIDNNAFFSTDSSVHNTVRGASIGK---VSESRNLVDAMK--FASSPTFHPHSLPEYHGSFANGSSYNFSSTISD 573
            ++EF+DV          N +++AG+Q+KL P  P   S   Q      E  L     +N+S         G++ S  +D G  +   +++  P+N+FI+ +        +  + R  S  K   + E  N  D  K    S P  HPH  P+Y  +FA+GS Y  S+T S+
Sbjct:  335 YIEFFDVRKAKVALQGLNGLEVAGRQLKLAPTCPEGTSFWPQFASDDGEGGLPKMAFNNLSSAHMGRHFPGILASTSIDGGSIRGMHNSVGSPMNSFIERHQSLDVPIGLPPSARVISASKPVGLQEFGNPFDNSKTGIQSMPNLHPH-FPDYLDNFASGSPYKSSTTFSE 504          
BLAST of CK148917 vs. TAIR peptide
Match: AT5G61960.2 (| Symbols: AML1, ML1 | MEI2-like protein 1 | chr5:24879001-24883483 REVERSE LENGTH=915)

HSP 1 Score: 65.4698 bits (158), Expect = 2.612e-11
Identity = 50/174 (28.74%), Postives = 77/174 (44.25%), Query Frame = 1
Query:   85 FVEFYDVXXXXXXXXXXNRIDIAGKQIKLEPGHPSLMQQTHK---GQDERDLGHSIIDNMSLRQKPTLSSGVIGSGFLDNGYSQRFQSAMRQPLNAFIDNNAFFSTDSSVHNTVRGASIGK---VSESRNLVDA--MKFASSPTFHPHSLPEYHGSFANGSSYN---FSSTISD 573
            ++EF+DV          N +++AGK+++L P +P   + T +      E  L  +   N S         G+I S   D G  +   +++  P+N+FI+ +   S       +  G S  K   + E  +  D   M   S P  HPHS  EY  +FANGS Y    FS  +SD
Sbjct:  342 YIEFFDVRAAAAALGGLNGLEVAGKKLQLVPTYPEGTRYTSQCAANDTEGCLPKTSYSNTSSGHIGRHFPGMISSTSSDGGSMRVIHNSIGSPVNSFIERHRSLSIPIGFPPSANGISASKPVGLQEHGHHFDNSNMGIQSMPNLHPHSFSEYVDNFANGSPYTSSAFSEMVSD 515          
BLAST of CK148917 vs. TAIR peptide
Match: AT5G61960.1 (| Symbols: AML1, ML1 | MEI2-like protein 1 | chr5:24879001-24883483 REVERSE LENGTH=915)

HSP 1 Score: 65.4698 bits (158), Expect = 2.612e-11
Identity = 50/174 (28.74%), Postives = 77/174 (44.25%), Query Frame = 1
Query:   85 FVEFYDVXXXXXXXXXXNRIDIAGKQIKLEPGHPSLMQQTHK---GQDERDLGHSIIDNMSLRQKPTLSSGVIGSGFLDNGYSQRFQSAMRQPLNAFIDNNAFFSTDSSVHNTVRGASIGK---VSESRNLVDA--MKFASSPTFHPHSLPEYHGSFANGSSYN---FSSTISD 573
            ++EF+DV          N +++AGK+++L P +P   + T +      E  L  +   N S         G+I S   D G  +   +++  P+N+FI+ +   S       +  G S  K   + E  +  D   M   S P  HPHS  EY  +FANGS Y    FS  +SD
Sbjct:  342 YIEFFDVRAAAAALGGLNGLEVAGKKLQLVPTYPEGTRYTSQCAANDTEGCLPKTSYSNTSSGHIGRHFPGMISSTSSDGGSMRVIHNSIGSPVNSFIERHRSLSIPIGFPPSANGISASKPVGLQEHGHHFDNSNMGIQSMPNLHPHSFSEYVDNFANGSPYTSSAFSEMVSD 515          
The following BLAST results are available for this feature:
BLAST of CK148917 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9RA66_RICCO7.211e-2738.25RNA-binding protein, putative OS=Ricinus communis ... [more]
B9IFK9_POPTR5.949e-2641.28Predicted protein (Fragment) OS=Populus trichocarp... [more]
D7SH76_VITVI1.310e-2542.33Whole genome shotgun sequence of line PN40024, sca... [more]
B9NEE0_POPTR8.994e-2036.63Predicted protein (Fragment) OS=Populus trichocarp... [more]
D7TFI4_VITVI3.729e-1733.33Whole genome shotgun sequence of line PN40024, sca... [more]
A5BN23_VITVI1.066e-1632.62Putative uncharacterized protein OS=Vitis vinifera... [more]
Q6J732_SOLLC2.125e-1331.58AML1 OS=Solanum lycopersicum PE=2 SV=1[more]
B9GZ23_POPTR2.902e-1232.12Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7M0H6_ARALY2.456e-1029.24Predicted protein OS=Arabidopsis lyrata subsp. lyr... [more]
Q9LYN7_ARATH5.472e-1028.07Mei2-like protein OS=Arabidopsis thaliana GN=T28J1... [more]
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BLAST of CK148917 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT5G07290.14.030e-1228.07| Symbols: AML4, ML4 | MEI2-like 4 | chr5:2294248-... [more]
AT5G61960.22.612e-1128.74| Symbols: AML1, ML1 | MEI2-like protein 1 | chr5:... [more]
AT5G61960.12.612e-1128.74| Symbols: AML1, ML1 | MEI2-like protein 1 | chr5:... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012677Nucleotide-binding, alpha-beta plaitGENE3D3.30.70.330no descriptioncoord: 5..54
score: 2.1
NoneNo IPR availableSEGsegsegcoord: 13..22
score
NoneNo IPR availableSUPERFAMILY54928RNA-binding domain, RBDcoord: 6..58
score: 3.4

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CK148917 ID=CK148917; Name=CK148917; organism=Cicer arietinum; type=EST; length=610bp
AATGATGATTCTTAAACATATTTTTGGATTTTATGGAGAAATTAAAGAAA
TCTATGATAAATCCAGTAACTGAAGCATCTCAAATTTGTTGAGTTTTATG
ATGTGCGAGCTGCAGAAGCCGCGCTTCGGGCATTGAACAGGATTGACATT
GCTGGGAAGCAGATCAAGCTTGAACCTGGCCATCCTAGTCTGATGCAGCA
GACTCACAAGGGACAAGATGAACGGGATCTTGGTCATAGCATTATTGACA
ACATGTCGTTACGACAAAAGCCAACACTGTCTTCTGGAGTAATCGGTTCT
GGCTTCTTGGACAATGGATATAGCCAGAGATTTCAATCTGCAATGCGGCA
ACCTTTGAATGCATTTATTGATAATAATGCATTCTTTTCTACCGATTCTA
GCGTTCACAACACTGTGAGAGGGGCGTCCATTGGAAAAGTTTCTGAGTCC
CGAAACCTTGTCGATGCAATGAAATTTGCATCTAGTCCAACATTTCATCC
TCATTCTTTACCAGAGTATCATGGTAGTTTCGCTAATGGTAGTTCGTATA
ACTTTTCTAGCACCATTAGCGACAAAGCTGGTAATATAGGTGCTGGAGGA
GTGACAGAAG
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR012677Nucleotide-bd_a/b_plait_sf