DY475126

EST Overview
NameDY475126
Unique NameDY475126
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length255
Libraries
Library NameType
LIBEST_016683 Chickpea (ICC3996) post-inoculation EST librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of DY475126 vs. TrEMBL
Match: B9RNB0_RICCO (Nucleic acid binding protein, putative OS=Ricinus communis GN=RCOM_1346320 PE=4 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.699e-12
Identity = 36/50 (72.00%), Postives = 39/50 (78.00%), Query Frame = 1
Query:  106 YKEYTGPPGSGSVVNNNNPQERLNPKKRSNAGSDEEDEIRDPNAVPTDFT 255
            YKEYTGPPGS +    NN Q+R    KRS+AGSDEEDE RDPNAVPTDFT
Sbjct:   17 YKEYTGPPGSSTA---NNTQDRSKANKRSHAGSDEEDEPRDPNAVPTDFT 63          
BLAST of DY475126 vs. TrEMBL
Match: B7FKP4_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.694e-11
Identity = 35/49 (71.43%), Postives = 37/49 (75.51%), Query Frame = 1
Query:  106 YKEYTGPPGSGSVVNNNNPQERLNPKKRSNAGSDEEDEIRDPNAVPTDF 252
            YKEYTGP GSGSV      QER    KRSNAGSDEEDE+RDPNA+PT F
Sbjct:   17 YKEYTGPAGSGSV------QERAKSNKRSNAGSDEEDEVRDPNAIPTGF 59          
BLAST of DY475126 vs. TrEMBL
Match: D7U2K7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_5.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00028150001 PE=4 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.006e-8
Identity = 31/50 (62.00%), Postives = 36/50 (72.00%), Query Frame = 1
Query:  106 YKEYTGPPGSGSVVNNNNPQERLNPKKRSNAGSDEEDEIRDPNAVPTDFT 255
            YKEYTGPP S      +N Q++    KRS+A SDEE+E RDPNAVPTDFT
Sbjct:   54 YKEYTGPPRS----TTSNVQDKAKTSKRSHASSDEEEEPRDPNAVPTDFT 99          
BLAST of DY475126 vs. TrEMBL
Match: B9I9G6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_774679 PE=4 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 6.520e-8
Identity = 31/50 (62.00%), Postives = 37/50 (74.00%), Query Frame = 1
Query:  106 YKEYTGPPGSGSVVNNNNPQERLNPKKRSNAGSDEEDEIRDPNAVPTDFT 255
            YKEYTGPPGS   VN+ +   ++N  KRS+  SDEE+E  DPNAVPTDFT
Sbjct:   17 YKEYTGPPGS--TVNSAHDMAKIN--KRSHVDSDEEEETPDPNAVPTDFT 62          
BLAST of DY475126 vs. TrEMBL
Match: B9GSW0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_710316 PE=4 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 6.520e-8
Identity = 31/50 (62.00%), Postives = 38/50 (76.00%), Query Frame = 1
Query:  106 YKEYTGPPGSGSVVNNNNPQERLNPKKRSNAGSDEEDEIRDPNAVPTDFT 255
            YKEYTGPP S   V+N + +E++N  KRS+  SDEE+E  DPNAVPTDFT
Sbjct:   17 YKEYTGPPSS--TVSNAHDREKVN--KRSHVDSDEEEETPDPNAVPTDFT 62          
BLAST of DY475126 vs. TAIR peptide
Match: AT3G62330.1 (| Symbols: | Zinc knuckle (CCHC-type) family protein | chr3:23063329-23065419 REVERSE LENGTH=479)

HSP 1 Score: 53.1434 bits (126), Expect = 4.049e-8
Identity = 30/52 (57.69%), Postives = 36/52 (69.23%), Query Frame = 1
Query:  106 YKEYTGPPGSGSVVNNNNPQERLNP-KKRSNAGSDEEDE-IRDPNAVPTDFT 255
            YKEYTGP    S V NNN Q++  P K+RS    DEE+E + DPN+VPTDFT
Sbjct:   18 YKEYTGP---ASAVTNNNIQDKDKPVKQRSEERCDEEEEQLPDPNSVPTDFT 66          
The following BLAST results are available for this feature:
BLAST of DY475126 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 5
Match NameE-valueIdentityDescription
B9RNB0_RICCO5.699e-1272.00Nucleic acid binding protein, putative OS=Ricinus ... [more]
B7FKP4_MEDTR3.694e-1171.43Putative uncharacterized protein OS=Medicago trunc... [more]
D7U2K7_VITVI1.006e-862.00Whole genome shotgun sequence of line PN40024, sca... [more]
B9I9G6_POPTR6.520e-862.00Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9GSW0_POPTR6.520e-862.00Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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BLAST of DY475126 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G62330.14.049e-857.69| Symbols: | Zinc knuckle (CCHC-type) family prot... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 9..21
score
NoneNo IPR availableSEGsegsegcoord: 19..37
score
NoneNo IPR availableSEGsegsegcoord: 23..36
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>DY475126 ID=DY475126; Name=DY475126; organism=Cicer arietinum; type=EST; length=255bp
GCAGAGTACGCGGGAACTCGTTTCGCATACATCTGTGATTAGAGTATTCA
ATTGATGGCTAATAGACCCGATCCAGATATCGATGACGATGATTTTCTCG
ATCTTTACAAGGAGTATACTGGTCCTCCTGGATCTGGATCCGTAGTTAAT
AACAATAACCCACAGGAAAGGTTAAACCCTAAGAAAAGGTCTAATGCAGG
TTCTGACGAAGAAGACGAAATTCGTGACCCTAATGCTGTTCCAACTGATT
TCACA
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