FE671527

EST Overview
NameFE671527
Unique NameFE671527
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length642
Libraries
Library NameType
LIBEST_022820 Drought-stressed chickpea leave librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Homology
[Close]
BLAST of FE671527 vs. SwissProt
Match: SFRS1_ARATH (Pre-mRNA-splicing factor SF2 OS=Arabidopsis thaliana GN=SF2 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.485e-11
Identity = 28/45 (62.22%), Postives = 39/45 (86.67%), Query Frame = -2 
Query:  501 RDSEGTFGLVDYTNYDDMRYAIRKLDDTEFRNPWARSYIRVRKYE 635
            RD+ GT G+VDYT Y+DM+YA++KLDDTEFRN ++  Y+RVR+Y+
Sbjct:  152 RDARGTTGVVDYTCYEDMKYALKKLDDTEFRNAFSNGYVRVREYD 196
[Close]
BLAST of FE671527 vs. TrEMBL
Match: C6TNJ2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.041e-17
Identity = 41/45 (91.11%), Postives = 44/45 (97.78%), Query Frame = -2 
Query:  501 RDSEGTFGLVDYTNYDDMRYAIRKLDDTEFRNPWARSYIRVRKYE 635
            RDSEGTFG+VDYTNYDDM+YAIRKLDD EFRNPWAR+YIRVRKYE
Sbjct:  149 RDSEGTFGIVDYTNYDDMKYAIRKLDDAEFRNPWARAYIRVRKYE 193
[Close]
BLAST of FE671527 vs. TrEMBL
Match: Q3HRY5_SOLTU (Pre-mRNA splicing factor-like protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.150e-16
Identity = 39/45 (86.67%), Postives = 44/45 (97.78%), Query Frame = -2 
Query:  501 RDSEGTFGLVDYTNYDDMRYAIRKLDDTEFRNPWARSYIRVRKYE 635
            RDSEGTFGLVDYTNY+DM+YAIRKLDDTEFRNPW R+YIRVR+Y+
Sbjct:  150 RDSEGTFGLVDYTNYEDMKYAIRKLDDTEFRNPWTRTYIRVREYK 194
[Close]
BLAST of FE671527 vs. TrEMBL
Match: C6TA73_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.150e-16
Identity = 40/45 (88.89%), Postives = 43/45 (95.56%), Query Frame = -2 
Query:  501 RDSEGTFGLVDYTNYDDMRYAIRKLDDTEFRNPWARSYIRVRKYE 635
            RDSEGT G+VDYTNYDDM+YAIRKLDDTEFRNPWA +YIRVRKYE
Sbjct:  149 RDSEGTLGIVDYTNYDDMKYAIRKLDDTEFRNPWAIAYIRVRKYE 193
[Close]
BLAST of FE671527 vs. TrEMBL
Match: Q9CA06_ARATH (Putative splicing factor; 53460-55514 OS=Arabidopsis thaliana GN=T1G12.13 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.503e-16
Identity = 38/45 (84.44%), Postives = 44/45 (97.78%), Query Frame = -2 
Query:  501 RDSEGTFGLVDYTNYDDMRYAIRKLDDTEFRNPWARSYIRVRKYE 635
            RDS+GT+G+VDYTNYDDM+YAIRKLDDTEFRNPWAR +IRV+KYE
Sbjct:  155 RDSDGTYGVVDYTNYDDMKYAIRKLDDTEFRNPWARGFIRVKKYE 199
[Close]
BLAST of FE671527 vs. TrEMBL
Match: D7LSI2_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_906222 PE=4 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.503e-16
Identity = 38/45 (84.44%), Postives = 44/45 (97.78%), Query Frame = -2 
Query:  501 RDSEGTFGLVDYTNYDDMRYAIRKLDDTEFRNPWARSYIRVRKYE 635
            RDS+GT+G+VDYTNYDDM+YAIRKLDDTEFRNPWAR +IRV+KYE
Sbjct:  156 RDSDGTYGVVDYTNYDDMKYAIRKLDDTEFRNPWARGFIRVKKYE 200
[Close]
BLAST of FE671527 vs. TrEMBL
Match: A8MR30_ARATH (Uncharacterized protein At3g49430.2 OS=Arabidopsis thaliana GN=At3g49430 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.503e-16
Identity = 38/45 (84.44%), Postives = 44/45 (97.78%), Query Frame = -2 
Query:  501 RDSEGTFGLVDYTNYDDMRYAIRKLDDTEFRNPWARSYIRVRKYE 635
            RDS+GT+G+VDYTNYDDM+YAIRKLDDTEFRNPWAR +IRV+KYE
Sbjct:  155 RDSDGTYGVVDYTNYDDMKYAIRKLDDTEFRNPWARGFIRVKKYE 199
[Close]
BLAST of FE671527 vs. TrEMBL
Match: A2RVS6_ARATH (At3g49430 OS=Arabidopsis thaliana GN=At3g49430 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.503e-16
Identity = 38/45 (84.44%), Postives = 44/45 (97.78%), Query Frame = -2 
Query:  501 RDSEGTFGLVDYTNYDDMRYAIRKLDDTEFRNPWARSYIRVRKYE 635
            RDS+GT+G+VDYTNYDDM+YAIRKLDDTEFRNPWAR +IRV+KYE
Sbjct:  155 RDSDGTYGVVDYTNYDDMKYAIRKLDDTEFRNPWARGFIRVKKYE 199
[Close]
BLAST of FE671527 vs. TrEMBL
Match: B9S1M8_RICCO (Arginine/serine-rich splicing factor, putative OS=Ricinus communis GN=RCOM_0866580 PE=4 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.962e-16
Identity = 38/45 (84.44%), Postives = 44/45 (97.78%), Query Frame = -2 
Query:  501 RDSEGTFGLVDYTNYDDMRYAIRKLDDTEFRNPWARSYIRVRKYE 635
            RDS+GTFG+VDYTNY+DM+YAIRKLDDTEFRNPWAR+YIRV+ YE
Sbjct:  150 RDSDGTFGIVDYTNYEDMKYAIRKLDDTEFRNPWARAYIRVKMYE 194
[Close]
BLAST of FE671527 vs. TrEMBL
Match: B9IDH4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_902624 PE=4 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.170e-15
Identity = 36/45 (80.00%), Postives = 45/45 (100.00%), Query Frame = -2 
Query:  501 RDSEGTFGLVDYTNYDDMRYAIRKLDDTEFRNPWARSYIRVRKYE 635
            RDS+GTFG+VDYTN++DM+YAIRKLDDTEFRNPWAR+YIRV+++E
Sbjct:  146 RDSDGTFGVVDYTNHEDMKYAIRKLDDTEFRNPWARAYIRVKQHE 190
[Close]
BLAST of FE671527 vs. TrEMBL
Match: B9I218_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1095123 PE=4 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.245e-15
Identity = 35/45 (77.78%), Postives = 43/45 (95.56%), Query Frame = -2 
Query:  501 RDSEGTFGLVDYTNYDDMRYAIRKLDDTEFRNPWARSYIRVRKYE 635
            RD +GT GLVDYTN++DM+YAIRKLDDTEF+NPWAR+YIRV++YE
Sbjct:  157 RDGDGTLGLVDYTNHEDMKYAIRKLDDTEFKNPWARAYIRVKQYE 201
[Close]
BLAST of FE671527 vs. TAIR peptide
Match: AT3G49430.3 (| Symbols: SRp34a, SR34a, At-SR34a | SER/ARG-rich protein 34A | chr3:18332668-18334829 FORWARD LENGTH=300)

HSP 1 Score: 90.1225 bits (222), Expect = 1.069e-18
Identity = 38/45 (84.44%), Postives = 44/45 (97.78%), Query Frame = -2 
Query:  501 RDSEGTFGLVDYTNYDDMRYAIRKLDDTEFRNPWARSYIRVRKYE 635
            RDS+GT+G+VDYTNYDDM+YAIRKLDDTEFRNPWAR +IRV+KYE
Sbjct:  155 RDSDGTYGVVDYTNYDDMKYAIRKLDDTEFRNPWARGFIRVKKYE 199
[Close]
BLAST of FE671527 vs. TAIR peptide
Match: AT3G49430.2 (| Symbols: SRp34a, SR34a, At-SR34a | SER/ARG-rich protein 34A | chr3:18332668-18334617 FORWARD LENGTH=297)

HSP 1 Score: 90.1225 bits (222), Expect = 1.069e-18
Identity = 38/45 (84.44%), Postives = 44/45 (97.78%), Query Frame = -2 
Query:  501 RDSEGTFGLVDYTNYDDMRYAIRKLDDTEFRNPWARSYIRVRKYE 635
            RDS+GT+G+VDYTNYDDM+YAIRKLDDTEFRNPWAR +IRV+KYE
Sbjct:  155 RDSDGTYGVVDYTNYDDMKYAIRKLDDTEFRNPWARGFIRVKKYE 199
[Close]
BLAST of FE671527 vs. TAIR peptide
Match: AT3G49430.1 (| Symbols: SRp34a, SR34a, At-SR34a | SER/ARG-rich protein 34A | chr3:18332668-18334829 FORWARD LENGTH=300)

HSP 1 Score: 90.1225 bits (222), Expect = 1.069e-18
Identity = 38/45 (84.44%), Postives = 44/45 (97.78%), Query Frame = -2 
Query:  501 RDSEGTFGLVDYTNYDDMRYAIRKLDDTEFRNPWARSYIRVRKYE 635
            RDS+GT+G+VDYTNYDDM+YAIRKLDDTEFRNPWAR +IRV+KYE
Sbjct:  155 RDSDGTYGVVDYTNYDDMKYAIRKLDDTEFRNPWARGFIRVKKYE 199
[Close]
BLAST of FE671527 vs. TAIR peptide
Match: AT1G02840.3 (| Symbols: SR1, ATSRP34, SRP34, SR34, At-SR34 | RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:626918-629583 FORWARD LENGTH=303)

HSP 1 Score: 68.9366 bits (167), Expect = 2.551e-12
Identity = 28/45 (62.22%), Postives = 39/45 (86.67%), Query Frame = -2 
Query:  501 RDSEGTFGLVDYTNYDDMRYAIRKLDDTEFRNPWARSYIRVRKYE 635
            RD+ GT G+VDYT Y+DM+YA++KLDDTEFRN ++  Y+RVR+Y+
Sbjct:  152 RDARGTTGVVDYTCYEDMKYALKKLDDTEFRNAFSNGYVRVREYD 196
[Close]
BLAST of FE671527 vs. TAIR peptide
Match: AT1G02840.2 (| Symbols: SR1, ATSRP34, SRP34, SR34, At-SR34 | RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:626918-628995 FORWARD LENGTH=285)

HSP 1 Score: 68.9366 bits (167), Expect = 2.551e-12
Identity = 28/45 (62.22%), Postives = 39/45 (86.67%), Query Frame = -2 
Query:  501 RDSEGTFGLVDYTNYDDMRYAIRKLDDTEFRNPWARSYIRVRKYE 635
            RD+ GT G+VDYT Y+DM+YA++KLDDTEFRN ++  Y+RVR+Y+
Sbjct:  152 RDARGTTGVVDYTCYEDMKYALKKLDDTEFRNAFSNGYVRVREYD 196
[Close]
BLAST of FE671527 vs. TAIR peptide
Match: AT1G02840.1 (| Symbols: SR1, ATSRP34, SRP34, SR34, At-SR34 | RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:626918-629583 FORWARD LENGTH=303)

HSP 1 Score: 68.9366 bits (167), Expect = 2.551e-12
Identity = 28/45 (62.22%), Postives = 39/45 (86.67%), Query Frame = -2 
Query:  501 RDSEGTFGLVDYTNYDDMRYAIRKLDDTEFRNPWARSYIRVRKYE 635
            RD+ GT G+VDYT Y+DM+YA++KLDDTEFRN ++  Y+RVR+Y+
Sbjct:  152 RDARGTTGVVDYTCYEDMKYALKKLDDTEFRNAFSNGYVRVREYD 196
[Close]
BLAST of FE671527 vs. TAIR peptide
Match: AT1G09140.2 (| Symbols: ATSRP30, SR30, At-SR30 | SERINE-ARGININE PROTEIN 30 | chr1:2943528-2945818 REVERSE LENGTH=256)

HSP 1 Score: 68.5514 bits (166), Expect = 3.332e-12
Identity = 32/47 (68.09%), Postives = 40/47 (85.11%), Query Frame = -2 
Query:  501 FPRDSEGTFGLVDYTNYDDMRYAIRKLDDTEFRNPWARSYIRVRKYE 641
            FP D +G  G+VDY+NYDDM+YAIRKLD TEFRN ++ +YIRVR+YE
Sbjct:  141 FP-DRKGMSGVVDYSNYDDMKYAIRKLDATEFRNAFSSAYIRVREYE 186
[Close]
BLAST of FE671527 vs. TAIR peptide
Match: AT1G09140.1 (| Symbols: ATSRP30, SR30, At-SR30 | SERINE-ARGININE PROTEIN 30 | chr1:2942887-2945818 REVERSE LENGTH=268)

HSP 1 Score: 68.5514 bits (166), Expect = 3.332e-12
Identity = 32/47 (68.09%), Postives = 40/47 (85.11%), Query Frame = -2 
Query:  501 FPRDSEGTFGLVDYTNYDDMRYAIRKLDDTEFRNPWARSYIRVRKYE 641
            FP D +G  G+VDY+NYDDM+YAIRKLD TEFRN ++ +YIRVR+YE
Sbjct:  141 FP-DRKGMSGVVDYSNYDDMKYAIRKLDATEFRNAFSSAYIRVREYE 186
[Close]
BLAST of FE671527 vs. TAIR peptide
Match: AT4G02430.2 (| Symbols: SR34b, At-SR34b | RNA-binding (RRM/RBD/RNP motifs) family protein | chr4:1069186-1071313 FORWARD LENGTH=278)

HSP 1 Score: 61.6178 bits (148), Expect = 4.073e-10
Identity = 27/45 (60.00%), Postives = 36/45 (80.00%), Query Frame = -2 
Query:  501 RDSEGTFGLVDYTNYDDMRYAIRKLDDTEFRNPWARSYIRVRKYE 635
            RD  GT G+VDYT+Y+DM+YA   LDDTEFRN ++  Y+RVR+Y+
Sbjct:  153 RDGRGTTGIVDYTSYEDMKYA---LDDTEFRNAFSHEYVRVREYD 194
The following BLAST results are available for this feature:
BLAST of FE671527 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
SFRS1_ARATH2.485e-1162.22Pre-mRNA-splicing factor SF2 OS=Arabidopsis thalia... [more]
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BLAST of FE671527 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6TNJ2_SOYBN1.041e-1791.11Putative uncharacterized protein OS=Glycine max PE... [more]
Q3HRY5_SOLTU1.150e-1686.67Pre-mRNA splicing factor-like protein OS=Solanum t... [more]
C6TA73_SOYBN1.150e-1688.89Putative uncharacterized protein OS=Glycine max PE... [more]
Q9CA06_ARATH1.503e-1684.44Putative splicing factor; 53460-55514 OS=Arabidops... [more]
D7LSI2_ARALY1.503e-1684.44Putative uncharacterized protein OS=Arabidopsis ly... [more]
A8MR30_ARATH1.503e-1684.44Uncharacterized protein At3g49430.2 OS=Arabidopsis... [more]
A2RVS6_ARATH1.503e-1684.44At3g49430 OS=Arabidopsis thaliana GN=At3g49430 PE=... [more]
B9S1M8_RICCO1.962e-1684.44Arginine/serine-rich splicing factor, putative OS=... [more]
B9IDH4_POPTR2.170e-1580.00Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9I218_POPTR8.245e-1577.78Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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BLAST of FE671527 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 9
Match NameE-valueIdentityDescription
AT3G49430.31.069e-1884.44| Symbols: SRp34a, SR34a, At-SR34a | SER/ARG-rich ... [more]
AT3G49430.21.069e-1884.44| Symbols: SRp34a, SR34a, At-SR34a | SER/ARG-rich ... [more]
AT3G49430.11.069e-1884.44| Symbols: SRp34a, SR34a, At-SR34a | SER/ARG-rich ... [more]
AT1G02840.32.551e-1262.22| Symbols: SR1, ATSRP34, SRP34, SR34, At-SR34 | RN... [more]
AT1G02840.22.551e-1262.22| Symbols: SR1, ATSRP34, SRP34, SR34, At-SR34 | RN... [more]
AT1G02840.12.551e-1262.22| Symbols: SR1, ATSRP34, SRP34, SR34, At-SR34 | RN... [more]
AT1G09140.23.332e-1268.09| Symbols: ATSRP30, SR30, At-SR30 | SERINE-ARGININ... [more]
AT1G09140.13.332e-1268.09| Symbols: ATSRP30, SR30, At-SR30 | SERINE-ARGININ... [more]
AT4G02430.24.073e-1060.00| Symbols: SR34b, At-SR34b | RNA-binding (RRM/RBD/... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 33..74
score: NAcoord: 78..99
score
NoneNo IPR availableSEGsegsegcoord: 5..20
score: NAcoord: 55..62
score
NoneNo IPR availablePANTHERPTHR10548ARGININE/SERINE-RICH SPLICING FACTORcoord: 3..111
score: 6.8
NoneNo IPR availableSEGsegsegcoord: 48..90
score: NAcoord: 94..114
score
NoneNo IPR availableSUPERFAMILY54928RNA-binding domain, RBDcoord: 1..63
score: 4.5

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FE671527 ID=FE671527; Name=FE671527; organism=Cicer arietinum; type=EST; length=642bp
ACCAGAAAATGCTAATAATTTTAATAGTAACTAGTTGAAAAGTACAGACG
GATCCAGGTTAATATCCGACATTCTTGTTTAAAAGAAACATGACCAAAAT
GGTAGCAGCAAGTCAAGTCTAGTTTAAGCCGCACAGAATAACCAAACTGA
TACAAACCAAGACAATTCTGGTACAATAATTATCCACTAAACAATTTAAA
TTAATTGAAACATAATTCCAATATTGCCCAGAATGGTGGAGAAGCTTTGG
AGATCCACCTGCATTTGTCAGGATATCAACCGCTGCCTGATAGAACCTGG
CGTGGAGATCGCGGTGATGCTGAACGGGATCGGGATCGGGATCGGGATCT
TGGCCTGAAAGATTTGATTGGTGATGCTGATCTGGATCTGGATCTGGAAA
TAGATCGCGACCTAGAGACAGATCGCTCCAAAGATCTTCTAGCCCTTTTC
GGACTTCTGCTCCTGCTGGGGCTTCTGCTGCGACTCCTTGAACGACTGCT
CTCGTACTTCCTCACCCGAATATAAGATCTCGCCCAAGGGTTTCTAAACT
CCGTGTCATCCAGTTTCCGAATGGCATATCTCATGTCATCATAATTAGTG
TAATCGACAAGGCCAAAAGTCCCTTCACTATCACGGGGAAAC
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