GR391481

EST Overview


Name	GR391481
Unique Name	GR391481
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	565

Libraries


Library Name	Type
LIBEST_024777 ICC1882 dehydration stressed root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR391481 vs. TrEMBL
Match: C6SXB5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 2.651e-7
Identity = 32/66 (48.48%), Postives = 37/66 (56.06%), Query Frame = -3

Query:   75 VNFGGRGFTVKRAGAIFTAFNENFAGIRTVSVNYRTCPTFTRLAERG----TQGQAIACMFSSDFP 260
            + F G  F +   GAIFT FNENFA IR +S +Y  CPTFT LAE       Q Q   C +  DFP
Sbjct:   63 IQFLGHCFALNGTGAIFTTFNENFASIRPLSFSYDACPTFTHLAECAALGHVQAQGFICFW--DFP 126

[Close]

BLAST of GR391481 vs. TrEMBL
Match: D7TTW4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_12.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00013151001 PE=4 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 4.522e-7
Identity = 26/56 (46.43%), Postives = 32/56 (57.14%), Query Frame = 3

Query:   78 KVRAEHTSYGL---ALGTAFC*TGKGWTCAIINTDGPDAGKVFVKCGENCTCPLNG 236
            K   +  +Y L     G A C  G+G+TC I    GPDAGK FV+CG  CTC +NG
Sbjct:   65 KTEGDSKTYALKSPGAGMAICRVGEGYTCVITKITGPDAGKTFVECGGGCTCVING 120

The following BLAST results are available for this feature:

BLAST of GR391481 vs. TrEMBL

BLAST of GR391481 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 2


Match Name	E-value	Identity	Description
C6SXB5_SOYBN	2.651e-7	48.48	Putative uncharacterized protein OS=Glycine max PE...	[more]
D7TTW4_VITVI	4.522e-7	46.43	Whole genome shotgun sequence of line PN40024, sca...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 69..80 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR391481 ID=GR391481; Name=GR391481; organism=Cicer arietinum; type=EST; length=565bp
GACGAGCACAAACAATCATTTACATCTCATATCATTGTAAGAACATGGAG
CCCCAAAGCTTCATGCAAGAGCAAGGGAAAGTCCGAGCTGAACATACAAG
CTATGGCCTGGCCTTGGGTACCGCGTTCTGCTAGACGGGTAAAGGTTGGA
CATGTGCGATAATTAACACTGACGGTCCTGATGCCGGCAAAGTTTTCGTT
AAATGCGGTGAAAATTGCACCTGCCCTCTTAACGGTGAACCCGCGTCCCC
CGAAATTGACCAGCAGTAGCGACTCTGACTATCCAAACATTCCGCCCACC
GCCCATCACGCTGCGAGCCGTTTCCACCCATCCGGTATTGAATGACCCCG
CATGTAATATTCAAGCTTTGGGCTCTCGCTGAACCGCTACTCATTACATA
AACCATGAGCCCCTGCCAATGCTTGATACACTCAATTGAACCCCTCACCC
CATCCCAACCCTCAATACTAATTAAAAGACCCCCTAAACTCTACGACCCG
TCCCACTACCTGGCGACCACCTACTCCTTCCCGTCTTTTCTCCCGCGCTA
CTACTACATGATTTC

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