GR394020
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR394020 vs. SwissProt
Match: Y1666_ARATH (Uncharacterized protein At1g76660 OS=Arabidopsis thaliana GN=At1g76660 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 9.010e-20 Identity = 56/117 (47.86%), Postives = 71/117 (60.68%), Query Frame = 2 Query: 2 QLVSPPVFSNFTTEPSTASFTPPPESVQMTTPSSPEVPFAQLLASSLDRARKNNGSHKFALYNYEFQPYQQYPGSPGAQLVSPGSVFSTSGTSTPFPDRRSSLELSRGETPKILGFE 352 QLVSPPVFS FTTEPSTA FTPPPE ++T PSSP+VP+A+ L SS+D KN+G YN Y YPGSP + L SP S S G +P + + SR ++ G++ Sbjct: 119 QLVSPPVFSTFTTEPSTAPFTPPPELARLTAPSSPDVPYARFLTSSMD--LKNSGK---GHYNDLQATYSLYPGSPASALRSPISRASGDGLLSP-----QNGKCSRSDSGNTFGYD 225
BLAST of GR394020 vs. TrEMBL
Match: B9RIV6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1583050 PE=4 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 1.501e-44 Identity = 89/119 (74.79%), Postives = 100/119 (84.03%), Query Frame = 2 Query: 2 QLVSPPVFSNFTTEPSTASFTPPPESVQMTTPSSPEVPFAQLLASSLDRARKNNGSH-KFALYNYEFQPYQQYPGSPGAQLVSPGSVFSTSGTSTPFPDRRSSLELSRGETPKILGFEH 355 QLV+PP FS FTTEPSTA FTPPPESVQ+TTPSSPEVPFAQLL SSL+RAR+N+G++ KFAL +YEFQ Y YPGSPG QL+SPGSV S SGTS+PFPDR LE GE PK+LGFEH Sbjct: 154 QLVTPPAFSAFTTEPSTAPFTPPPESVQLTTPSSPEVPFAQLLTSSLERARRNSGTNQKFALSHYEFQSYPLYPGSPGGQLISPGSVISNSGTSSPFPDRYPILEFRMGEAPKLLGFEH 272
BLAST of GR394020 vs. TrEMBL
Match: B9I470_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_823466 PE=4 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 2.560e-44 Identity = 87/119 (73.11%), Postives = 99/119 (83.19%), Query Frame = 2 Query: 2 QLVSPPVFSNFTTEPSTASFTPPPESVQMTTPSSPEVPFAQLLASSLDRARKNNG-SHKFALYNYEFQPYQQYPGSPGAQLVSPGSVFSTSGTSTPFPDRRSSLELSRGETPKILGFEH 355 QLV+PPVFS FTTEPSTA FTPPPESVQ+TTPSSPEVPFAQLL SSL+RAR+N+G + KF+L +YEFQ Y YPGSPG Q++SPGS S SGTS+PFPDR LE GE PK+LGFEH Sbjct: 147 QLVTPPVFSAFTTEPSTAPFTPPPESVQLTTPSSPEVPFAQLLTSSLERARRNSGPNQKFSLSHYEFQSYHLYPGSPGGQIISPGSAISNSGTSSPFPDRHPMLEFRMGEAPKLLGFEH 265
BLAST of GR394020 vs. TrEMBL
Match: A5B2B1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026979 PE=4 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 6.108e-38 Identity = 83/119 (69.75%), Postives = 94/119 (78.99%), Query Frame = 2 Query: 2 QLVSPPVFSNFTTEPSTASFTPPPESVQMTTPSSPEVPFAQLLASSLDRARKNNGSH-KFALYNYEFQPYQQYPGSPGAQLVSPGSVFSTSGTSTPFPDRRSSLELSRGETPKILGFEH 355 QLVSPPVFS F TEPSTA FTPPPESVQ+TTPSSPEVPFAQLL SSLDR+R+N+G++ K +L NYEFQPYQ YP SP L+SP S SGTS+PFPDRR + E PK+LGFEH Sbjct: 78 QLVSPPVFSTFPTEPSTAPFTPPPESVQLTTPSSPEVPFAQLLTSSLDRSRRNSGTNQKLSLSNYEFQPYQLYPESPVGHLISP---ISNSGTSSPFPDRRPIV-----EAPKLLGFEH 188
BLAST of GR394020 vs. TrEMBL
Match: B7FHE7_MEDTR (Putative uncharacterized protein (Fragment) OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.274e-35 Identity = 75/82 (91.46%), Postives = 78/82 (95.12%), Query Frame = 2 Query: 2 QLVSPPVFSNFTTEPSTASFTPPPESVQMTTPSSPEVPFAQLLASSLDRARKNNGSHKFALYNYEFQPYQQYPGSPGAQLVS 247 QLVSPPVFSNFT EPSTA+FTPPPESV MTTPSSPEVPFAQLLASSLDRARK+N HKFALYNYE+QPYQQYPGSPGAQLVS Sbjct: 143 QLVSPPVFSNFTAEPSTANFTPPPESVLMTTPSSPEVPFAQLLASSLDRARKSN--HKFALYNYEYQPYQQYPGSPGAQLVS 222
BLAST of GR394020 vs. TrEMBL
Match: D7MFZ0_ARALY (Hydroxyproline-rich glycoprotein family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_492265 PE=4 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.318e-32 Identity = 75/121 (61.98%), Postives = 88/121 (72.73%), Query Frame = 2 Query: 2 QLVSPPVFSNFTTEPSTASFTPPPESVQMTTPSSPEVPFAQLLASSLDRARKNNGS---HKFALYNYEFQPYQQYPGSPGAQLVSPGSVFSTSGTSTPFPDRRSSLELSRGETPKILGFEH 355 Q V+PPVFS FTTEPSTA FTPPPES PSSPEVPFAQLL SSL++AR+N G HKF+ +YEF+ +Q YPGSPG L+SPG SGTS+P+P + S +E GE PK LGFEH Sbjct: 131 QPVTPPVFSAFTTEPSTAPFTPPPES-----PSSPEVPFAQLLTSSLEKARRNIGGGMHHKFSAAHYEFKSHQVYPGSPGGNLISPG-----SGTSSPYPGKCSIIEFRIGEPPKFLGFEH 241
BLAST of GR394020 vs. TrEMBL
Match: Q8GYX5_ARATH (At4g25620 OS=Arabidopsis thaliana GN=At4g25620/M7J2_10 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 3.835e-32 Identity = 75/121 (61.98%), Postives = 88/121 (72.73%), Query Frame = 2 Query: 2 QLVSPPVFSNFTTEPSTASFTPPPESVQMTTPSSPEVPFAQLLASSLDRARKNNG---SHKFALYNYEFQPYQQYPGSPGAQLVSPGSVFSTSGTSTPFPDRRSSLELSRGETPKILGFEH 355 Q V+PPVFS FTTEPSTA FTPPPES PSSPEVPFAQLL SSL+RAR+N+G + KF+ +YEF+ Q YPGSPG L+SPG SGTS+P+P + S +E GE PK LGFEH Sbjct: 136 QPVTPPVFSAFTTEPSTAPFTPPPES-----PSSPEVPFAQLLTSSLERARRNSGGGMNQKFSAAHYEFKSCQVYPGSPGGNLISPG-----SGTSSPYPGKCSIIEFRIGEPPKFLGFEH 246
BLAST of GR394020 vs. TrEMBL
Match: O65600_ARATH (Putative uncharacterized protein AT4g25620 OS=Arabidopsis thaliana GN=M7J2.10 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 3.835e-32 Identity = 75/121 (61.98%), Postives = 88/121 (72.73%), Query Frame = 2 Query: 2 QLVSPPVFSNFTTEPSTASFTPPPESVQMTTPSSPEVPFAQLLASSLDRARKNNG---SHKFALYNYEFQPYQQYPGSPGAQLVSPGSVFSTSGTSTPFPDRRSSLELSRGETPKILGFEH 355 Q V+PPVFS FTTEPSTA FTPPPES PSSPEVPFAQLL SSL+RAR+N+G + KF+ +YEF+ Q YPGSPG L+SPG SGTS+P+P + S +E GE PK LGFEH Sbjct: 111 QPVTPPVFSAFTTEPSTAPFTPPPES-----PSSPEVPFAQLLTSSLERARRNSGGGMNQKFSAAHYEFKSCQVYPGSPGGNLISPG-----SGTSSPYPGKCSIIEFRIGEPPKFLGFEH 221
BLAST of GR394020 vs. TrEMBL
Match: D7MRR7_ARALY (Hydroxyproline-rich glycoprotein family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_495313 PE=4 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 3.835e-32 Identity = 75/123 (60.98%), Postives = 89/123 (72.36%), Query Frame = 2 Query: 2 QLVSPPVFSNFTTEPSTASFTPPPES-VQMTTPSSPEVPFAQLLASSLDRARKNNGS---HKFALYNYEFQPYQQYPGSPGA-QLVSPGSVFSTSGTSTPFPDRRSSLELSRGETPKILGFEH 355 Q V+PPVFS F TEPSTA +TPPPES V +TTPSSPEVPFAQLL SSL+ R+N+ S KF+ +YEF+ Q PGSPG L+SPGSV S SGTS+P+P + +E GE PK LGFEH Sbjct: 138 QPVTPPVFSAFVTEPSTAPYTPPPESSVHITTPSSPEVPFAQLLTSSLELTRRNSSSGMNQKFSSSHYEFRSNQVCPGSPGGGNLISPGSVISNSGTSSPYPGKSPMVEFRIGEPPKFLGFEH 260
BLAST of GR394020 vs. TrEMBL
Match: Q9FHB7_ARATH (At5g52430 OS=Arabidopsis thaliana GN=At5g52430 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 3.246e-31 Identity = 74/123 (60.16%), Postives = 89/123 (72.36%), Query Frame = 2 Query: 2 QLVSPPVFSNFTTEPSTASFTPPPES-VQMTTPSSPEVPFAQLLASSLDRARKNNGS---HKFALYNYEFQPYQQYPGSPGA-QLVSPGSVFSTSGTSTPFPDRRSSLELSRGETPKILGFEH 355 Q V+PPVFS F TEPSTA +TPPPES V +TTPSSPEVPFAQLL SSL+ R+++ S KF+ +YEF+ Q PGSPG L+SPGSV S SGTS+P+P + +E GE PK LGFEH Sbjct: 139 QPVTPPVFSAFITEPSTAPYTPPPESSVHITTPSSPEVPFAQLLTSSLELTRRDSTSGMNQKFSSSHYEFRSNQVCPGSPGGGNLISPGSVISNSGTSSPYPGKSPMVEFRIGEPPKFLGFEH 261
BLAST of GR394020 vs. TrEMBL
Match: D7TVX6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_25.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00019732001 PE=4 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 7.232e-31 Identity = 72/115 (62.61%), Postives = 78/115 (67.83%), Query Frame = 2 Query: 2 QLVSPPVFSNFTTEPSTASFTPPPESVQMTTPSSPEVPFAQLLASSLDRARKNNGSHKFALYNYEFQPYQQYPGSPGAQLVSPGSVFSTSGTSTPFPDRRSSLELSRGETPKILG 346 QLVSPPVFS FTTEPSTA FTPPPESV +TTPSSPEVPFAQL + R H+F L YEFQ YQ YPGSP L+SP S S SGTS+PFPDR S+ TP LG Sbjct: 147 QLVSPPVFSTFTTEPSTAPFTPPPESVHLTTPSSPEVPFAQLFDPN---NRNGEAGHRFLLSQYEFQSYQLYPGSPVGHLISPSSGISGSGTSSPFPDRSGSI------TPDALG 252
BLAST of GR394020 vs. TAIR peptide
Match: AT4G25620.1 (| Symbols: | hydroxyproline-rich glycoprotein family protein | chr4:13067447-13069296 REVERSE LENGTH=449) HSP 1 Score: 140.969 bits (354), Expect = 1.440e-34 Identity = 75/121 (61.98%), Postives = 88/121 (72.73%), Query Frame = 2 Query: 2 QLVSPPVFSNFTTEPSTASFTPPPESVQMTTPSSPEVPFAQLLASSLDRARKNNG---SHKFALYNYEFQPYQQYPGSPGAQLVSPGSVFSTSGTSTPFPDRRSSLELSRGETPKILGFEH 355 Q V+PPVFS FTTEPSTA FTPPPES PSSPEVPFAQLL SSL+RAR+N+G + KF+ +YEF+ Q YPGSPG L+SPG SGTS+P+P + S +E GE PK LGFEH Sbjct: 136 QPVTPPVFSAFTTEPSTAPFTPPPES-----PSSPEVPFAQLLTSSLERARRNSGGGMNQKFSAAHYEFKSCQVYPGSPGGNLISPG-----SGTSSPYPGKCSIIEFRIGEPPKFLGFEH 246
BLAST of GR394020 vs. TAIR peptide
Match: AT5G52430.1 (| Symbols: | hydroxyproline-rich glycoprotein family protein | chr5:21283093-21285045 REVERSE LENGTH=438) HSP 1 Score: 137.887 bits (346), Expect = 1.219e-33 Identity = 74/123 (60.16%), Postives = 89/123 (72.36%), Query Frame = 2 Query: 2 QLVSPPVFSNFTTEPSTASFTPPPES-VQMTTPSSPEVPFAQLLASSLDRARKNNGS---HKFALYNYEFQPYQQYPGSPGA-QLVSPGSVFSTSGTSTPFPDRRSSLELSRGETPKILGFEH 355 Q V+PPVFS F TEPSTA +TPPPES V +TTPSSPEVPFAQLL SSL+ R+++ S KF+ +YEF+ Q PGSPG L+SPGSV S SGTS+P+P + +E GE PK LGFEH Sbjct: 139 QPVTPPVFSAFITEPSTAPYTPPPESSVHITTPSSPEVPFAQLLTSSLELTRRDSTSGMNQKFSSSHYEFRSNQVCPGSPGGGNLISPGSVISNSGTSSPYPGKSPMVEFRIGEPPKFLGFEH 261
BLAST of GR394020 vs. TAIR peptide
Match: AT1G76660.1 (| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT5G52430.1); Has 353 Blast hits to 231 proteins in 60 species: Archae - 0; Bacteria - 6; Metazoa - 57; Fungi - 22; Plants - 125; Viruses - 4; Other Eukaryotes - 139 (source: NCBI BLink). | chr1:28769157-28771036 REVERSE LENGTH=431) HSP 1 Score: 95.5153 bits (236), Expect = 6.938e-21 Identity = 56/117 (47.86%), Postives = 71/117 (60.68%), Query Frame = 2 Query: 2 QLVSPPVFSNFTTEPSTASFTPPPESVQMTTPSSPEVPFAQLLASSLDRARKNNGSHKFALYNYEFQPYQQYPGSPGAQLVSPGSVFSTSGTSTPFPDRRSSLELSRGETPKILGFE 352 QLVSPPVFS FTTEPSTA FTPPPE ++T PSSP+VP+A+ L SS+D KN+G YN Y YPGSP + L SP S S G +P + + SR ++ G++ Sbjct: 119 QLVSPPVFSTFTTEPSTAPFTPPPELARLTAPSSPDVPYARFLTSSMD--LKNSGK---GHYNDLQATYSLYPGSPASALRSPISRASGDGLLSP-----QNGKCSRSDSGNTFGYD 225
BLAST of GR394020 vs. TAIR peptide
Match: AT1G63720.1 (| Symbols: | BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT5G52430.1); Has 490 Blast hits to 394 proteins in 96 species: Archae - 0; Bacteria - 2; Metazoa - 132; Fungi - 88; Plants - 175; Viruses - 14; Other Eukaryotes - 79 (source: NCBI BLink). | chr1:23636122-23637348 REVERSE LENGTH=358) HSP 1 Score: 93.9745 bits (232), Expect = 2.019e-20 Identity = 59/121 (48.76%), Postives = 75/121 (61.98%), Query Frame = 2 Query: 2 QLVSPPVFSNFTTEPSTASFTPPPES----VQMTTPSSPEVPFAQLLASSLDRARKNNGSHKFAL-YNYEFQPYQQYPGSPGAQLVSPGSVFSTSGTSTPFPDRRSSL--ELSRGETPKIL 343 QLVSPPVFS +TTEPS+A TPP + + TTPSSPEVPFAQL S+ + + +KF + +YEFQ YQ PGSP QL+SP SG ++PFPD +SL + PK+L Sbjct: 142 QLVSPPVFSTYTTEPSSAPITPPLDDSSIYLTTTTPSSPEVPFAQLFNSN---HQTGSYGYKFPMSSSYEFQFYQLPPGSPLGQLISPS---PGSGPTSPFPDGETSLFPHFQVSDPPKLL 256 The following BLAST results are available for this feature:
BLAST of GR394020 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 1
BLAST of GR394020 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR394020 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR394020 ID=GR394020; Name=GR394020; organism=Cicer arietinum; type=EST; length=355bpback to top |