GR395830

EST Overview
NameGR395830
Unique NameGR395830
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length381
Libraries
Library NameType
LIBEST_024781 ICC4958 dehydration stressed root cDNA librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Homology
BLAST of GR395830 vs. TrEMBL
Match: B9IJR3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_835680 PE=4 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.765e-13
Identity = 35/42 (83.33%), Postives = 37/42 (88.10%), Query Frame = -1
Query:  256 NGTDPCLVTGNTTVLRPGNGSKRLETLISKLLSNENFRPRQC 381
            NGTDPC   GNTTVLRPG G+KRLET+IS LLSNENFRPRQC
Sbjct:  386 NGTDPCSAIGNTTVLRPGPGAKRLETMISTLLSNENFRPRQC 427          
BLAST of GR395830 vs. TrEMBL
Match: B9H3Y7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_556242 PE=4 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.727e-12
Identity = 33/42 (78.57%), Postives = 37/42 (88.10%), Query Frame = -1
Query:  256 NGTDPCLVTGNTTVLRPGNGSKRLETLISKLLSNENFRPRQC 381
            NGTDPC   GNTTVLRPG G+KRL++LIS LLSNENF+PRQC
Sbjct:  386 NGTDPCSAIGNTTVLRPGPGAKRLQSLISSLLSNENFQPRQC 427          
BLAST of GR395830 vs. TrEMBL
Match: B9RUK1_RICCO (Acetylglucosaminyltransferase, putative OS=Ricinus communis GN=RCOM_0853740 PE=4 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 9.769e-12
Identity = 33/42 (78.57%), Postives = 37/42 (88.10%), Query Frame = -1
Query:  256 NGTDPCLVTGNTTVLRPGNGSKRLETLISKLLSNENFRPRQC 381
            NG+DPC V GNTTVLRPG G+KRLE LIS LLS+ENFRP+QC
Sbjct:  388 NGSDPCSVIGNTTVLRPGPGAKRLENLISNLLSSENFRPKQC 429          
BLAST of GR395830 vs. TrEMBL
Match: B6SUI5_MAIZE (BGGP Beta-1-3-galactosyl-O-glycosyl-glycoprotein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.001e-10
Identity = 29/48 (60.42%), Postives = 36/48 (75.00%), Query Frame = -1
Query:  238 NGTDPCLVTGNTTVLRPGNGSKRLETLISKLLSNENFRPRQCV*DEPN 381
            NGTDPC   G+  VLRPG G++RL+ L++ LLS ENFRPRQCV +  N
Sbjct:  408 NGTDPCAAVGDAAVLRPGPGAERLQRLVTSLLSEENFRPRQCVVENEN 455          
BLAST of GR395830 vs. TrEMBL
Match: Q9LFQ0_ARATH (AT5g15050/F2G14_170 OS=Arabidopsis thaliana GN=F2G14_170 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 2.037e-9
Identity = 28/42 (66.67%), Postives = 36/42 (85.71%), Query Frame = -1
Query:  256 NGTDPCLVTGNTTVLRPGNGSKRLETLISKLLSNENFRPRQC 381
            NG+DPC V G+T+V++PG G+KR+E LI+ LLS ENFRPRQC
Sbjct:  392 NGSDPCAVIGDTSVIKPGLGAKRIEKLITYLLSTENFRPRQC 433          
BLAST of GR395830 vs. TrEMBL
Match: A5AKF8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030959 PE=4 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 3.475e-9
Identity = 28/42 (66.67%), Postives = 33/42 (78.57%), Query Frame = -1
Query:  256 NGTDPCLVTGNTTVLRPGNGSKRLETLISKLLSNENFRPRQC 381
            NGTDPC V GN +VL+PG G+KRL  L+  LLS +NFRPRQC
Sbjct:  362 NGTDPCXVVGNPSVLKPGPGAKRLXNLLVSLLSKQNFRPRQC 403          
BLAST of GR395830 vs. TrEMBL
Match: D7M6Q9_ARALY (Glycosyltransferase family 14 protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_488347 PE=4 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 5.927e-9
Identity = 27/42 (64.29%), Postives = 36/42 (85.71%), Query Frame = -1
Query:  256 NGTDPCLVTGNTTVLRPGNGSKRLETLISKLLSNENFRPRQC 381
            NG+DPC + G+T+V++PG G+KR+E LI+ LLS ENFRPRQC
Sbjct:  392 NGSDPCAMIGDTSVIKPGLGAKRVEKLITYLLSTENFRPRQC 433          
BLAST of GR395830 vs. TrEMBL
Match: Q9FLD7_ARATH (At5g39990 OS=Arabidopsis thaliana GN=At5g39990 PE=2 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.724e-8
Identity = 26/42 (61.90%), Postives = 34/42 (80.95%), Query Frame = -1
Query:  256 NGTDPCLVTGNTTVLRPGNGSKRLETLISKLLSNENFRPRQC 381
            NG+DPC V G+T V+RPG G++RLE L++ LLS ENFR +QC
Sbjct:  405 NGSDPCAVIGDTDVIRPGPGARRLENLVTSLLSTENFRSKQC 446          
BLAST of GR395830 vs. TrEMBL
Match: D7MJE1_ARALY (Glycosyltransferase family 14 protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_493988 PE=4 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 2.252e-8
Identity = 26/42 (61.90%), Postives = 33/42 (78.57%), Query Frame = -1
Query:  256 NGTDPCLVTGNTTVLRPGNGSKRLETLISKLLSNENFRPRQC 381
            NG+DPC V G T V+RPG G++RLE L++ LLS ENFR +QC
Sbjct:  403 NGSDPCAVIGETDVIRPGPGARRLENLVTSLLSTENFRSKQC 444          
BLAST of GR395830 vs. TrEMBL
Match: C5WPH6_SORBI (Putative uncharacterized protein Sb01g011480 OS=Sorghum bicolor GN=Sb01g011480 PE=4 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 5.017e-8
Identity = 28/45 (62.22%), Postives = 33/45 (73.33%), Query Frame = -1
Query:  253 NGTD--PCLVTGNTTVLRPGNGSKRLETLISKLLSNENFRPRQCV 381
            NGTD  PC   GN   LRPG G++RL+ L++ LLS ENFRPRQCV
Sbjct:  408 NGTDDDPCAAVGNAAFLRPGPGAERLQRLVTSLLSEENFRPRQCV 452          
BLAST of GR395830 vs. TAIR peptide
Match: AT5G15050.1 (| Symbols: | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein | chr5:4871820-4873454 REVERSE LENGTH=434)

HSP 1 Score: 65.4698 bits (158), Expect = 9.642e-12
Identity = 28/42 (66.67%), Postives = 36/42 (85.71%), Query Frame = -1
Query:  256 NGTDPCLVTGNTTVLRPGNGSKRLETLISKLLSNENFRPRQC 381
            NG+DPC V G+T+V++PG G+KR+E LI+ LLS ENFRPRQC
Sbjct:  392 NGSDPCAVIGDTSVIKPGLGAKRIEKLITYLLSTENFRPRQC 433          
BLAST of GR395830 vs. TAIR peptide
Match: AT5G39990.1 (| Symbols: | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein | chr5:16004494-16006428 FORWARD LENGTH=447)

HSP 1 Score: 62.3882 bits (150), Expect = 8.163e-11
Identity = 26/42 (61.90%), Postives = 34/42 (80.95%), Query Frame = -1
Query:  256 NGTDPCLVTGNTTVLRPGNGSKRLETLISKLLSNENFRPRQC 381
            NG+DPC V G+T V+RPG G++RLE L++ LLS ENFR +QC
Sbjct:  405 NGSDPCAVIGDTDVIRPGPGARRLENLVTSLLSTENFRSKQC 446          
The following BLAST results are available for this feature:
BLAST of GR395830 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9IJR3_POPTR6.765e-1383.33Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9H3Y7_POPTR5.727e-1278.57Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9RUK1_RICCO9.769e-1278.57Acetylglucosaminyltransferase, putative OS=Ricinus... [more]
B6SUI5_MAIZE7.001e-1060.42BGGP Beta-1-3-galactosyl-O-glycosyl-glycoprotein O... [more]
Q9LFQ0_ARATH2.037e-966.67AT5g15050/F2G14_170 OS=Arabidopsis thaliana GN=F2G... [more]
A5AKF8_VITVI3.475e-966.67Putative uncharacterized protein OS=Vitis vinifera... [more]
D7M6Q9_ARALY5.927e-964.29Glycosyltransferase family 14 protein OS=Arabidops... [more]
Q9FLD7_ARATH1.724e-861.90At5g39990 OS=Arabidopsis thaliana GN=At5g39990 PE=... [more]
D7MJE1_ARALY2.252e-861.90Glycosyltransferase family 14 protein OS=Arabidops... [more]
C5WPH6_SORBI5.017e-862.22Putative uncharacterized protein Sb01g011480 OS=So... [more]
back to top
BLAST of GR395830 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G15050.19.642e-1266.67| Symbols: | Core-2/I-branching beta-1,6-N-acetyl... [more]
AT5G39990.18.163e-1161.90| Symbols: | Core-2/I-branching beta-1,6-N-acetyl... [more]
back to top
Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR395830 ID=GR395830; Name=GR395830; organism=Cicer arietinum; type=EST; length=381bp
CGACAACCTTGTAATAATCAAATTTAATTTTTCACAAGATTTGTCTCTTC
CTTTTTGTTTCACCAAAATCAAGGACAATAAACAAACATGTATAATTTCC
ACTATTTTTCTTTCTTCTAATAAAAAGAAACACTAATTTTAATTGATCAT
GCTAACTAATCGTGCACAGATTTAATAAACTAAAGCAAGTGGAAGTGTAA
ATAAAACTCTAACAAGACCATTTTCTTTTGCGTGGCGGTTTGGTTCGTCT
CATACACATTGTCTAGGTCGGAAATTTTCATTCGACAACAACTTGCTGAT
CAACGTTTCGAGCCTTTTCGAACCATTGCCTGGCCTAAGGACTGTAGTGT
TGCCGGTTACCAAGCAAGGGTCGGTTCCGTT
back to top