GR400420

EST Overview
NameGR400420
Unique NameGR400420
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length373
Libraries
Library NameType
LIBEST_024783 ICC4958 Slow drought stresses root cDNA librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Homology
BLAST of GR400420 vs. SwissProt
Match: RL14_PEA (Probable 60S ribosomal protein L14 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.652e-16
Identity = 43/48 (89.58%), Postives = 45/48 (93.75%), Query Frame = 1
Query:    1 AGSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAAVVRQELAKLKKTA 144
            A SSWGRKLIVKK RA+LNDFDRFK+MLAKIKRAA VRQELAKLKKTA
Sbjct:   85 AKSSWGRKLIVKKTRAALNDFDRFKIMLAKIKRAAGVRQELAKLKKTA 132          
BLAST of GR400420 vs. SwissProt
Match: RL142_ARATH (60S ribosomal protein L14-2 OS=Arabidopsis thaliana GN=RPL14B PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.932e-15
Identity = 39/44 (88.64%), Postives = 43/44 (97.73%), Query Frame = 1
Query:    7 SSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAAVVRQELAKLKK 138
            SSWGRKLIV+KRRA+LNDFDRFK+MLAKIK+A VVRQELAKLKK
Sbjct:   87 SSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGVVRQELAKLKK 130          
BLAST of GR400420 vs. SwissProt
Match: RL141_ARATH (60S ribosomal protein L14-1 OS=Arabidopsis thaliana GN=RPL14A PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.829e-15
Identity = 38/44 (86.36%), Postives = 43/44 (97.73%), Query Frame = 1
Query:    7 SSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAAVVRQELAKLKK 138
            SSWGRKLIV+KRRA+LNDFDRFK+MLAKIKRA +VRQELAKLK+
Sbjct:   87 SSWGRKLIVQKRRAALNDFDRFKIMLAKIKRAGIVRQELAKLKR 130          
BLAST of GR400420 vs. SwissProt
Match: RL14_GRIJA (60S ribosomal protein L14 OS=Griffithsia japonica GN=RPL14 PE=2 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 1.723e-7
Identity = 23/45 (51.11%), Postives = 36/45 (80.00%), Query Frame = 1
Query:    1 AGSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAAVVRQELAKLK 135
            A S WG+KL  +++RA+L+DF RFK+M+A++K++  +  ELAKLK
Sbjct:   88 AASGWGKKLAKREKRAALDDFGRFKVMVARMKKSKAINAELAKLK 132          
BLAST of GR400420 vs. TrEMBL
Match: C6SXV0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.367e-16
Identity = 43/46 (93.48%), Postives = 46/46 (100.00%), Query Frame = 1
Query:    7 SSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAAVVRQELAKLKKTA 144
            SSWGRKLIV+KRRASLNDFDRFK+MLAKIKRAAVVRQELAKLKK+A
Sbjct:   87 SSWGRKLIVRKRRASLNDFDRFKIMLAKIKRAAVVRQELAKLKKSA 132          
BLAST of GR400420 vs. TrEMBL
Match: B7FL54_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.864e-15
Identity = 42/46 (91.30%), Postives = 45/46 (97.83%), Query Frame = 1
Query:    7 SSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAAVVRQELAKLKKTA 144
            SSWGRKLIVKKRRA+LNDFDRFK+MLAKIKRA VVRQELAKL+KTA
Sbjct:   87 SSWGRKLIVKKRRAALNDFDRFKIMLAKIKRAGVVRQELAKLRKTA 132          
BLAST of GR400420 vs. TrEMBL
Match: C6SY27_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.152e-15
Identity = 41/46 (89.13%), Postives = 46/46 (100.00%), Query Frame = 1
Query:    7 SSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAAVVRQELAKLKKTA 144
            SSWGRKLIV+KRRASLNDFDRFK+MLAKIK+AAVVRQELAKL+K+A
Sbjct:   87 SSWGRKLIVRKRRASLNDFDRFKIMLAKIKKAAVVRQELAKLRKSA 132          
BLAST of GR400420 vs. TrEMBL
Match: Q9SXL9_CUCSA (Csf-1 protein (Fragment) OS=Cucumis sativus GN=Csf-1 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 5.423e-15
Identity = 42/44 (95.45%), Postives = 43/44 (97.73%), Query Frame = 1
Query:    7 SSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAAVVRQELAKLKK 138
            SSWGRKLIVKKRRASLNDFDRFKLMLAKIKRA +VRQELAKLKK
Sbjct:   92 SSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGLVRQELAKLKK 135          
BLAST of GR400420 vs. TrEMBL
Match: Q3HVK7_SOLTU (Glycoprotein-like protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 7.083e-15
Identity = 42/44 (95.45%), Postives = 43/44 (97.73%), Query Frame = 1
Query:    7 SSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAAVVRQELAKLKK 138
            SSWGRKLIV+KRRASLNDFDRFKLMLAKIKRA VVRQELAKLKK
Sbjct:   87 SSWGRKLIVQKRRASLNDFDRFKLMLAKIKRAGVVRQELAKLKK 130          
BLAST of GR400420 vs. TrEMBL
Match: Q6I657_CITLA (Csf-1 protein (Fragment) OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.578e-14
Identity = 41/44 (93.18%), Postives = 43/44 (97.73%), Query Frame = 1
Query:    7 SSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAAVVRQELAKLKK 138
            SSWGRKLIVK+RRASLNDFDRFKLMLAKIKRA +VRQELAKLKK
Sbjct:   46 SSWGRKLIVKQRRASLNDFDRFKLMLAKIKRAGLVRQELAKLKK 89          
BLAST of GR400420 vs. TrEMBL
Match: Q6K1Q6_ORYSJ (Putative hydroxyproline-rich glycoprotein 1 OS=Oryza sativa subsp. japonica GN=OSJNOa283G08.1 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.515e-14
Identity = 39/46 (84.78%), Postives = 43/46 (93.48%), Query Frame = 1
Query:    7 SSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAAVVRQELAKLKKTA 144
            SSWG+KLIV+KRRASLNDFDRFK+MLAKIKR   +RQELAKLKKTA
Sbjct:   87 SSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQELAKLKKTA 132          
BLAST of GR400420 vs. TrEMBL
Match: A2X7C9_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_08121 PE=4 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.515e-14
Identity = 39/46 (84.78%), Postives = 43/46 (93.48%), Query Frame = 1
Query:    7 SSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAAVVRQELAKLKKTA 144
            SSWG+KLIV+KRRASLNDFDRFK+MLAKIKR   +RQELAKLKKTA
Sbjct:   87 SSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQELAKLKKTA 132          
BLAST of GR400420 vs. TrEMBL
Match: D7T502_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_118.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00012876001 PE=4 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.591e-14
Identity = 39/44 (88.64%), Postives = 42/44 (95.45%), Query Frame = 1
Query:    7 SSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAAVVRQELAKLKK 138
            SSWGRKLIV+KRRASLNDFDRFK+MLAKIKR  V+RQELAKLKK
Sbjct:  132 SSWGRKLIVQKRRASLNDFDRFKIMLAKIKRGGVIRQELAKLKK 175          
BLAST of GR400420 vs. TrEMBL
Match: D7SZI9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_49.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00027844001 PE=4 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.591e-14
Identity = 39/44 (88.64%), Postives = 42/44 (95.45%), Query Frame = 1
Query:    7 SSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAAVVRQELAKLKK 138
            SSWGRKLIV+KRRASLNDFDRFK+MLAKIKR  V+RQELAKLKK
Sbjct:  173 SSWGRKLIVQKRRASLNDFDRFKIMLAKIKRGGVIRQELAKLKK 216          
BLAST of GR400420 vs. TAIR peptide
Match: AT4G27090.1 (| Symbols: | Ribosomal protein L14 | chr4:13594104-13595187 REVERSE LENGTH=134)

HSP 1 Score: 80.4925 bits (197), Expect = 2.674e-16
Identity = 39/44 (88.64%), Postives = 43/44 (97.73%), Query Frame = 1
Query:    7 SSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAAVVRQELAKLKK 138
            SSWGRKLIV+KRRA+LNDFDRFK+MLAKIK+A VVRQELAKLKK
Sbjct:   87 SSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGVVRQELAKLKK 130          
BLAST of GR400420 vs. TAIR peptide
Match: AT2G20450.1 (| Symbols: | Ribosomal protein L14 | chr2:8813923-8815071 FORWARD LENGTH=134)

HSP 1 Score: 80.1073 bits (196), Expect = 3.492e-16
Identity = 38/44 (86.36%), Postives = 43/44 (97.73%), Query Frame = 1
Query:    7 SSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAAVVRQELAKLKK 138
            SSWGRKLIV+KRRA+LNDFDRFK+MLAKIKRA +VRQELAKLK+
Sbjct:   87 SSWGRKLIVQKRRAALNDFDRFKIMLAKIKRAGIVRQELAKLKR 130          
The following BLAST results are available for this feature:
BLAST of GR400420 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 4
Match NameE-valueIdentityDescription
RL14_PEA2.652e-1689.58Probable 60S ribosomal protein L14 OS=Pisum sativu... [more]
RL142_ARATH2.932e-1588.6460S ribosomal protein L14-2 OS=Arabidopsis thalian... [more]
RL141_ARATH3.829e-1586.3660S ribosomal protein L14-1 OS=Arabidopsis thalian... [more]
RL14_GRIJA1.723e-751.1160S ribosomal protein L14 OS=Griffithsia japonica ... [more]
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BLAST of GR400420 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6SXV0_SOYBN8.367e-1693.48Putative uncharacterized protein OS=Glycine max PE... [more]
B7FL54_MEDTR1.864e-1591.30Putative uncharacterized protein OS=Medicago trunc... [more]
C6SY27_SOYBN4.152e-1589.13Putative uncharacterized protein OS=Glycine max PE... [more]
Q9SXL9_CUCSA5.423e-1595.45Csf-1 protein (Fragment) OS=Cucumis sativus GN=Csf... [more]
Q3HVK7_SOLTU7.083e-1595.45Glycoprotein-like protein OS=Solanum tuberosum PE=... [more]
Q6I657_CITLA1.578e-1493.18Csf-1 protein (Fragment) OS=Citrullus lanatus PE=2... [more]
Q6K1Q6_ORYSJ3.515e-1484.78Putative hydroxyproline-rich glycoprotein 1 OS=Ory... [more]
A2X7C9_ORYSI3.515e-1484.78Putative uncharacterized protein OS=Oryza sativa s... [more]
D7T502_VITVI4.591e-1488.64Whole genome shotgun sequence of line PN40024, sca... [more]
D7SZI9_VITVI4.591e-1488.64Whole genome shotgun sequence of line PN40024, sca... [more]
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BLAST of GR400420 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT4G27090.12.674e-1688.64| Symbols: | Ribosomal protein L14 | chr4:1359410... [more]
AT2G20450.13.492e-1686.36| Symbols: | Ribosomal protein L14 | chr2:8813923... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 3..15
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR400420 ID=GR400420; Name=GR400420; organism=Cicer arietinum; type=EST; length=373bp
GCGGGGAGCTCATGGGGCAGAAAACTCATTGTCAAAAAGAGAAGGGCTTC
CCTCAATGATTTTGATAGGTTCAAGCTTATGTTGGCCAAGATTAAGAGGG
CAGCAGTTGTAAGGCAAGAGCTTGCTAAGCTGAAAAAGACCGCTTAGGCA
GACATAGCTTTCCCATATATTGTTCAAATTTTTCTTATTAAGTTGCTTAC
TTTGGTTCATGTATCATTGAGACACTAGTGAAAAGCTTCATCTTCAGATA
TTTATATTAGGGATTGGGGACAATACTTTTTAAGTTTCCTAGCTTTGCCT
TTGCTTGTGCTTGCAGATTTCTCAATATTATTTTTTTTGGACGACAAAAT
CACTTAAAATAATTAGAGAAACA
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