GR406523

EST Overview


Name	GR406523
Unique Name	GR406523
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	398

Libraries


Library Name	Type
LIBEST_024786 JG11 Salinity-stressed chickpea root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
KEGG analysis for Cicer arietinum unigene v1	2011-01-05
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

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BLAST of GR406523 vs. SwissProt
Match: ARPC2_DICDI (Actin-related protein 2/3 complex subunit 2 OS=Dictyostelium discoideum GN=arcB PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.778e-12
Identity = 41/127 (32.28%), Postives = 69/127 (54.33%), Query Frame = 3

Query:    9 IIAVFPIRFREKSDVIIATTFFQELMDVGNSDKWTKAPPCTWSAIPPP-ELRG-EAFEDLSTNGGFVSFDISSRHVEGNRLDKTVWNLLNFNAYVRYHVKSTKGFIQRRMRKRLEDLVEVLHQTNSE 383
            +I +F I F++  DVI++  F Q  +DV  +   +  P  T+S   PP EL+G +       N GFVSF +   H++  +  ++   +  F  Y+ YH+K  KG++   MR R+E L++VL++   E
Sbjct:  154 VIVIFDIAFKDADDVILSKIFLQSFVDVRKTI--SNVPSITFSQKDPPLELKGVKGVRAGQANHGFVSFVLFPAHIK--KPQESADLIQTFRDYLHYHIKCAKGYMHTSMRNRVESLIQVLNRAKPE 276

[Close]

BLAST of GR406523 vs. SwissProt
Match: ARPC2_DROME (Probable actin-related protein 2/3 complex subunit 2 OS=Drosophila melanogaster GN=Arc-p34 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 1.156e-11
Identity = 42/126 (33.33%), Postives = 62/126 (49.21%), Query Frame = 3

Query:    6 RIIAVFPIRFREKSDVIIATTFFQELMDVGNSDKWTKAPPCTWSAIPPPELRGEAFEDLSTNGGFVSFDISSRHVEGNRLDKTVWNLLNFNAYVRYHVKSTKGFIQRRMRKRLEDLVEVLHQTNSE 383
            R+  VF   FR++ DVII   F QEL + G     T AP   +S   PP         +  N G+V+F +  RH      D T+  +  F  Y+ YH+K +K +I  RMR +  D ++VL++   E
Sbjct:  160 RVTVVFSTIFRDEDDVIIGKVFMQELRE-GRRASHT-APQVLFSHREPPLELANTDARVGDNIGYVTFVLFPRHTNKETRDNTINLIHMFRDYLHYHIKCSKAYIHSRMRAKTSDFLKVLNRARPE 283

[Close]

BLAST of GR406523 vs. SwissProt
Match: ARPC2_SCHPO (Actin-related protein 2/3 complex subunit 2 OS=Schizosaccharomyces pombe GN=arc2 PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.494e-11
Identity = 37/127 (29.13%), Postives = 64/127 (50.39%), Query Frame = 3

Query:    6 RIIAVFPIRFREKSDVIIATTFFQELMDVGNSDKWTKAPPCTWSAIPPP-ELRGEAFEDLSTNGGFVSFDISSRHVEGNRLDKTVWNLLNFNAYVRYHVKSTKGFIQRRMRKRLEDLVEVLHQTNSE 383
            R+  VF  +FRE++D I    F QE +D         AP   +S   PP E+R         + GFV+F +  RH      +  + ++  F   + +H+K++K ++ +RMRKR+ D  +VL++   +
Sbjct:  175 RVTVVFSTKFREETDRIFGKVFLQEFVDARRRPAIQTAPQVLFSYRDPPLEIRDIQGIQKGDDFGFVTFVLFERHFTPQNREDCISHIQVFRNTLHFHIKASKAYMHQRMRKRVADFQKVLNRAKPD 301

[Close]

BLAST of GR406523 vs. SwissProt
Match: ARPC2_PONAB (Actin-related protein 2/3 complex subunit 2 OS=Pongo abelii GN=ARPC2 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.788e-11
Identity = 37/130 (28.46%), Postives = 64/130 (49.23%), Query Frame = 3

Query:    6 RIIAVFPIRFREKSDVIIATTFFQELMDVGNSDKWTKAPPCTWSAIPPPELRGEAFEDLSTNGGFVSFDISSRHVEGNRLDKTVWNLLNFNAYVRYHVKSTKGFIQRRMRKRLEDLVEVLHQTNSEENEQ 395
            R+  VF   F++  DV+I   F QE  + G     T AP   +S   PP    +    +  N G+++F +  RH   +  D T+  +  F  Y+ YH+K +K +I  RMR +  D ++VL++   +  ++
Sbjct:  160 RVTVVFSTVFKDDDDVVIGKVFMQEFKE-GRRASHT-APQVLFSHREPPLELKDTDAAVGDNIGYITFVLFPRHTNASARDNTINLIHTFRDYLHYHIKCSKAYIHTRMRAKTSDFLKVLNRARPDAEKK 287

[Close]

BLAST of GR406523 vs. SwissProt
Match: ARPC2_HUMAN (Actin-related protein 2/3 complex subunit 2 OS=Homo sapiens GN=ARPC2 PE=1 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.788e-11
Identity = 37/130 (28.46%), Postives = 64/130 (49.23%), Query Frame = 3

Query:    6 RIIAVFPIRFREKSDVIIATTFFQELMDVGNSDKWTKAPPCTWSAIPPPELRGEAFEDLSTNGGFVSFDISSRHVEGNRLDKTVWNLLNFNAYVRYHVKSTKGFIQRRMRKRLEDLVEVLHQTNSEENEQ 395
            R+  VF   F++  DV+I   F QE  + G     T AP   +S   PP    +    +  N G+++F +  RH   +  D T+  +  F  Y+ YH+K +K +I  RMR +  D ++VL++   +  ++
Sbjct:  160 RVTVVFSTVFKDDDDVVIGKVFMQEFKE-GRRASHT-APQVLFSHREPPLELKDTDAAVGDNIGYITFVLFPRHTNASARDNTINLIHTFRDYLHYHIKCSKAYIHTRMRAKTSDFLKVLNRARPDAEKK 287

[Close]

BLAST of GR406523 vs. SwissProt
Match: ARPC2_BOVIN (Actin-related protein 2/3 complex subunit 2 OS=Bos taurus GN=ARPC2 PE=1 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.788e-11
Identity = 37/130 (28.46%), Postives = 64/130 (49.23%), Query Frame = 3

Query:    6 RIIAVFPIRFREKSDVIIATTFFQELMDVGNSDKWTKAPPCTWSAIPPPELRGEAFEDLSTNGGFVSFDISSRHVEGNRLDKTVWNLLNFNAYVRYHVKSTKGFIQRRMRKRLEDLVEVLHQTNSEENEQ 395
            R+  VF   F++  DV+I   F QE  + G     T AP   +S   PP    +    +  N G+++F +  RH   +  D T+  +  F  Y+ YH+K +K +I  RMR +  D ++VL++   +  ++
Sbjct:  160 RVTVVFSTVFKDDDDVVIGKVFMQEFKE-GRRASHT-APQVLFSHREPPLELKDTDAAVGDNIGYITFVLFPRHTNASARDNTINLIHTFRDYLHYHIKCSKAYIHTRMRAKTSDFLKVLNRARPDAEKK 287

[Close]

BLAST of GR406523 vs. SwissProt
Match: ARPC2_RAT (Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus GN=Arpc2 PE=1 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 1.278e-10
Identity = 37/130 (28.46%), Postives = 63/130 (48.46%), Query Frame = 3

Query:    6 RIIAVFPIRFREKSDVIIATTFFQELMDVGNSDKWTKAPPCTWSAIPPPELRGEAFEDLSTNGGFVSFDISSRHVEGNRLDKTVWNLLNFNAYVRYHVKSTKGFIQRRMRKRLEDLVEVLHQTNSEENEQ 395
            R+  VF   F++  DV+I   F QE  + G     T AP   +S   PP    +    +  N G+++F +  RH      D T+  +  F  Y+ YH+K +K +I  RMR +  D ++VL++   +  ++
Sbjct:  160 RVTVVFSTVFKDDDDVVIGKVFMQEFKE-GRRASHT-APQVLFSHREPPLELKDTDAAVGDNIGYITFVLFPRHTNATARDNTINLIHTFRDYLHYHIKCSKAYIHTRMRAKTSDFLKVLNRARPDAEKK 287

[Close]

BLAST of GR406523 vs. SwissProt
Match: ARPC2_MOUSE (Actin-related protein 2/3 complex subunit 2 OS=Mus musculus GN=Arpc2 PE=1 SV=3)

HSP 1 Score: 65.0846 bits (157), Expect = 1.278e-10
Identity = 37/130 (28.46%), Postives = 63/130 (48.46%), Query Frame = 3

Query:    6 RIIAVFPIRFREKSDVIIATTFFQELMDVGNSDKWTKAPPCTWSAIPPPELRGEAFEDLSTNGGFVSFDISSRHVEGNRLDKTVWNLLNFNAYVRYHVKSTKGFIQRRMRKRLEDLVEVLHQTNSEENEQ 395
            R+  VF   F++  DV+I   F QE  + G     T AP   +S   PP    +    +  N G+++F +  RH      D T+  +  F  Y+ YH+K +K +I  RMR +  D ++VL++   +  ++
Sbjct:  160 RVTVVFSTVFKDDDDVVIGKVFMQEFKE-GRRASHT-APQVLFSHREPPLELKDTDAAVGDNIGYITFVLFPRHTNATARDNTINLIHTFRDYLHYHIKCSKAYIHTRMRAKTSDFLKVLNRARPDAEKK 287

[Close]

BLAST of GR406523 vs. SwissProt
Match: ARPC2_CAEEL (Probable actin-related protein 2/3 complex subunit 2 OS=Caenorhabditis elegans GN=arx-4 PE=2 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 1.278e-10
Identity = 37/127 (29.13%), Postives = 64/127 (50.39%), Query Frame = 3

Query:    6 RIIAVFPIRFREKSDVIIATTFFQELMDVGNSDKWTKAPPCTWSAIPPP-ELRGEAFEDLSTNGGFVSFDISSRHVEGNRLDKTVWNLLNFNAYVRYHVKSTKGFIQRRMRKRLEDLVEVLHQTNSE 383
            R+  +F   F++  DVII   F QE  +   + +   AP   +S   PP EL+      +  N G+++F +  RH      D T+  + +F  Y+ YH+K +K ++  RMR +  D ++VL++   E
Sbjct:  161 RVTVIFSTVFKDADDVIIGKVFLQEFREGRKASQ--TAPAVLYSLGEPPLELKDLPEARVGDNVGYITFVLFPRHTNKKTKDNTIDLIHSFRDYLHYHIKCSKVYLHTRMRAKTTDFLKVLNRARPE 285

[Close]

BLAST of GR406523 vs. SwissProt
Match: ARPC2_ANOGA (Probable actin-related protein 2/3 complex subunit 2 OS=Anopheles gambiae GN=Arc-p34 PE=3 SV=2)

HSP 1 Score: 65.0846 bits (157), Expect = 1.278e-10
Identity = 39/126 (30.95%), Postives = 62/126 (49.21%), Query Frame = 3

Query:    6 RIIAVFPIRFREKSDVIIATTFFQELMDVGNSDKWTKAPPCTWSAIPPPELRGEAFEDLSTNGGFVSFDISSRHVEGNRLDKTVWNLLNFNAYVRYHVKSTKGFIQRRMRKRLEDLVEVLHQTNSE 383
            R+  VF   FR++ DV++   F QEL + G     T AP   +S   PP         +  N G+V+F +  RH      D T+  +  F  Y+ YH+K +K +I  RMR +  + ++VL++   E
Sbjct:  163 RVTVVFSTIFRDEDDVVLGKVFMQELRE-GRRASHT-APQVLFSHREPPLELANTGARVGENIGYVTFVLFPRHTAKETRDNTINLIHMFRDYLHYHIKCSKAYIHSRMRAKTTEFLKVLNRARPE 286

[Close]

BLAST of GR406523 vs. TrEMBL
Match: B9SQV5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1217910 PE=4 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 6.990e-55
Identity = 103/130 (79.23%), Postives = 115/130 (88.46%), Query Frame = 3

Query:    3 QRIIAVFPIRFREKSDVIIATTFFQELMDVGNSDKWTKAPPCTWSAIPPPELRGEAFEDLSTNGGFVSFDISSRHVEGNRLDKTVWNLLNFNAYVRYHVKSTKGFIQRRMRKRLEDLVEVLHQTNSEENE 392
            Q+I AVFP+RF+E SDVIIAT FFQELMDVG+S+KW KAPPCTWS IPPPELRGE  EDLSTNGGFVSFDISSRHVEG +LDKTVW+LLNF AYV+ HVK T+GFIQRRM+KRLE LVE L + NSE+NE
Sbjct:  166 QKITAVFPMRFKEPSDVIIATAFFQELMDVGSSEKWAKAPPCTWSPIPPPELRGETLEDLSTNGGFVSFDISSRHVEGKKLDKTVWSLLNFYAYVKNHVKCTRGFIQRRMQKRLESLVEGLQKGNSEQNE 295

[Close]

BLAST of GR406523 vs. TrEMBL
Match: D7SZM6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_49.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00027900001 PE=4 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 7.728e-54
Identity = 101/130 (77.69%), Postives = 111/130 (85.38%), Query Frame = 3

Query:    3 QRIIAVFPIRFREKSDVIIATTFFQELMDVGNSDKWTKAPPCTWSAIPPPELRGEAFEDLSTNGGFVSFDISSRHVEGNRLDKTVWNLLNFNAYVRYHVKSTKGFIQRRMRKRLEDLVEVLHQTNSEENE 392
            Q+I AVFP+RFRE SDVIIAT FFQELMDVG+S+ W KAPPCTWS IPPPELRGE FEDLSTNGGFVSFDI S HVEG +LDKTVW+LLNF AYV+YHVK T+GFIQRRM+ RLE LVEVL   + EE E
Sbjct:  169 QKITAVFPMRFRENSDVIIATAFFQELMDVGSSEAWAKAPPCTWSPIPPPELRGELFEDLSTNGGFVSFDIFSHHVEGKQLDKTVWSLLNFYAYVKYHVKCTRGFIQRRMKNRLESLVEVLQNASMEEEE 298

[Close]

BLAST of GR406523 vs. TrEMBL
Match: B9HSS9_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_229877 PE=4 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 8.544e-53
Identity = 100/121 (82.64%), Postives = 109/121 (90.08%), Query Frame = 3

Query:    3 QRIIAVFPIRFREKSDVIIATTFFQELMDVGNSDKWTKAPPCTWSAIPPPELRGEAFEDLSTNGGFVSFDISSRHVEGNRLDKTVWNLLNFNAYVRYHVKSTKGFIQRRMRKRLEDLVEVL 365
            Q+I AVFP+RFRE SDVIIAT FFQELMDVG+S+KW KAPPCTWS IPPPELRGE  EDLSTNGGFVSFDISSRHVEG +LDKTVW+LLNF AYV+ HVK T+GFIQRRM+KRLE LVEVL
Sbjct:  150 QKITAVFPMRFREHSDVIIATAFFQELMDVGSSEKWAKAPPCTWSPIPPPELRGEPLEDLSTNGGFVSFDISSRHVEGKKLDKTVWSLLNFYAYVKNHVKCTRGFIQRRMQKRLESLVEVL 270

[Close]

BLAST of GR406523 vs. TrEMBL
Match: B9HKT7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_803770 PE=4 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 6.770e-50
Identity = 94/119 (78.99%), Postives = 105/119 (88.24%), Query Frame = 3

Query:    3 QRIIAVFPIRFREKSDVIIATTFFQELMDVGNSDKWTKAPPCTWSAIPPPELRGEAFEDLSTNGGFVSFDISSRHVEGNRLDKTVWNLLNFNAYVRYHVKSTKGFIQRRMRKRLEDLVE 359
            Q+I AVFP+RF+E SDVIIAT FFQELMDVG+S+KW KAPPCTWS IPPPELRGE  EDLSTNGGFV+FDISSRHVEG +LDKTVW+LLNF AYV+ HVK T+GFIQRRM+KRLE   E
Sbjct:  169 QKITAVFPMRFKEHSDVIIATAFFQELMDVGSSEKWAKAPPCTWSPIPPPELRGEPLEDLSTNGGFVTFDISSRHVEGKKLDKTVWSLLNFYAYVKKHVKGTRGFIQRRMQKRLETHAE 287

[Close]

BLAST of GR406523 vs. TrEMBL
Match: A5BZC6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_000730 PE=4 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 6.137e-43
Identity = 82/100 (82.00%), Postives = 89/100 (89.00%), Query Frame = 3

Query:    3 QRIIAVFPIRFREKSDVIIATTFFQELMDVGNSDKWTKAPPCTWSAIPPPELRGEAFEDLSTNGGFVSFDISSRHVEGNRLDKTVWNLLNFNAYVRYHVK 302
            Q+I AVFP+RFRE SDVIIAT FFQELMDVG+S+ W KAPPCTWS IPPPELRGE FEDLSTNGGFVSFDI S HVEG +LDKTVW+LLNF AYV+YHVK
Sbjct:  169 QKITAVFPMRFRENSDVIIATAFFQELMDVGSSEAWAKAPPCTWSPIPPPELRGELFEDLSTNGGFVSFDIFSHHVEGKQLDKTVWSLLNFYAYVKYHVK 268

[Close]

BLAST of GR406523 vs. TrEMBL
Match: D7LG97_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_482281 PE=4 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 5.744e-41
Identity = 80/128 (62.50%), Postives = 103/128 (80.47%), Query Frame = 3

Query:    3 QRIIAVFPIRFREKSDVIIATTFFQELMDVGNSDKWTKAPPCTWSAIPPPELRGEAFEDLSTNGGFVSFDISSRHVEGNRLDKTVWNLLNFNAYVRYHVKSTKGFIQRRMRKRLEDLVEVLHQTNSEE 386
            ++I AVFP+ F++ SDV+IAT+FFQE+          KAP C+WS IPP +LRGE  +DL+TN GFVSFDI+SRHVEG RLDKTVWNLLNF AYV+YH+K ++G+IQRRMRKR++ LV++L+ TN EE
Sbjct:  175 KKITAVFPMNFKDNSDVVIATSFFQEM---------GKAPQCSWSPIPPLQLRGEPVQDLTTNSGFVSFDITSRHVEGKRLDKTVWNLLNFYAYVKYHIKCSRGYIQRRMRKRMDSLVKLLNNTNLEE 293

[Close]

BLAST of GR406523 vs. TrEMBL
Match: Q3EBP4_ARATH (Putative uncharacterized protein At2g33385.1 OS=Arabidopsis thaliana GN=At2g33385 PE=4 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 9.171e-39
Identity = 76/128 (59.38%), Postives = 101/128 (78.91%), Query Frame = 3

Query:    3 QRIIAVFPIRFREKSDVIIATTFFQELMDVGNSDKWTKAPPCTWSAIPPPELRGEAFEDLSTNGGFVSFDISSRHVEGNRLDKTVWNLLNFNAYVRYHVKSTKGFIQRRMRKRLEDLVEVLHQTNSEE 386
            ++I AVFP+ F++ SDV+IAT+FFQ++          KAP C+WS IPP +LRGE  +DL+TN GFVSFDI+SRH+EG RLDKTVWNLLNF A  +YH+K ++G+IQRRMRKR+E LV++L+ T+ EE
Sbjct:  170 EKITAVFPMNFKDNSDVVIATSFFQDM---------GKAPQCSWSPIPPLQLRGEPVQDLTTNSGFVSFDITSRHIEGKRLDKTVWNLLNFYACAKYHIKCSRGYIQRRMRKRMETLVKLLNNTSLEE 288

[Close]

BLAST of GR406523 vs. TrEMBL
Match: Q7XPZ3_ORYSJ (OSJNBa0004N05.15 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0004N05.15 PE=2 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 4.552e-38
Identity = 71/131 (54.20%), Postives = 100/131 (76.34%), Query Frame = 3

Query:    6 RIIAVFPIRFREKSDVIIATTFFQELMDVGNSDKWTKAPPCTWSAIPPPELRGEAFEDLSTNGGFVSFDISSRHVEGNRLDKTVWNLLNFNAYVRYHVKSTKGFIQRRMRKRLEDLVEVLHQTNSEENEQT 398
            +I A+FP+RFR+ +D+ IA++FFQEL D+G++  +++AP C+WS IPPPELRGE    L+TNGGFVSFDI +RHV+G R  +T W LLNF +YV+YH+K T+ +IQ RMRKRLE + EV+       N+++
Sbjct:  163 KISAIFPMRFRDDTDLAIASSFFQELQDLGSTSSFSRAPRCSWSPIPPPELRGEYVHHLTTNGGFVSFDILARHVKGRRAARTAWILLNFQSYVKYHIKCTRSYIQSRMRKRLEIMTEVIDDAKFRGNDES 293

[Close]

BLAST of GR406523 vs. TrEMBL
Match: Q01HD5_ORYSA (OSIGBa0157K09-H0214G12.22 protein OS=Oryza sativa GN=OSIGBa0157K09-H0214G12.22 PE=4 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 4.552e-38
Identity = 71/131 (54.20%), Postives = 100/131 (76.34%), Query Frame = 3

Query:    6 RIIAVFPIRFREKSDVIIATTFFQELMDVGNSDKWTKAPPCTWSAIPPPELRGEAFEDLSTNGGFVSFDISSRHVEGNRLDKTVWNLLNFNAYVRYHVKSTKGFIQRRMRKRLEDLVEVLHQTNSEENEQT 398
            +I A+FP+RFR+ +D+ IA++FFQEL D+G++  +++AP C+WS IPPPELRGE    L+TNGGFVSFDI +RHV+G R  +T W LLNF +YV+YH+K T+ +IQ RMRKRLE + EV+       N+++
Sbjct:  163 KISAIFPMRFRDDTDLAIASSFFQELQDLGSTSSFSRAPRCSWSPIPPPELRGEYVHHLTTNGGFVSFDILARHVKGRRAARTAWILLNFQSYVKYHIKCTRSYIQSRMRKRLEIMTEVIDDAKFRGNDES 293

[Close]

BLAST of GR406523 vs. TrEMBL
Match: B8ARQ7_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_16616 PE=4 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 4.552e-38
Identity = 71/131 (54.20%), Postives = 100/131 (76.34%), Query Frame = 3

Query:    6 RIIAVFPIRFREKSDVIIATTFFQELMDVGNSDKWTKAPPCTWSAIPPPELRGEAFEDLSTNGGFVSFDISSRHVEGNRLDKTVWNLLNFNAYVRYHVKSTKGFIQRRMRKRLEDLVEVLHQTNSEENEQT 398
            +I A+FP+RFR+ +D+ IA++FFQEL D+G++  +++AP C+WS IPPPELRGE    L+TNGGFVSFDI +RHV+G R  +T W LLNF +YV+YH+K T+ +IQ RMRKRLE + EV+       N+++
Sbjct:  163 KISAIFPMRFRDDTDLAIASSFFQELQDLGSTSSFSRAPRCSWSPIPPPELRGEYVHHLTTNGGFVSFDILARHVKGRRAARTAWILLNFQSYVKYHIKCTRSYIQSRMRKRLEIMTEVIDDAKFRGNDES 293

[Close]

BLAST of GR406523 vs. TAIR peptide
Match: AT2G33385.2 (| Symbols: arpc2b | actin-related protein C2B | chr2:14147604-14149769 REVERSE LENGTH=374)

HSP 1 Score: 176.792 bits (447), Expect = 3.264e-45
Identity = 80/128 (62.50%), Postives = 106/128 (82.81%), Query Frame = 3

Query:    3 QRIIAVFPIRFREKSDVIIATTFFQELMDVGNSDKWTKAPPCTWSAIPPPELRGEAFEDLSTNGGFVSFDISSRHVEGNRLDKTVWNLLNFNAYVRYHVKSTKGFIQRRMRKRLEDLVEVLHQTNSEE 386
            ++I AVFP+ F++ SDV+IAT+FFQEL++VG+     KAP C+WS IPP +LRGE  +DL+TN GFVSFDI+SRH+EG RLDKTVWNLLNF A  +YH+K ++G+IQRRMRKR+E LV++L+ T+ EE
Sbjct:  170 EKITAVFPMNFKDNSDVVIATSFFQELVEVGSQKDMGKAPQCSWSPIPPLQLRGEPVQDLTTNSGFVSFDITSRHIEGKRLDKTVWNLLNFYACAKYHIKCSRGYIQRRMRKRMETLVKLLNNTSLEE 297

[Close]

BLAST of GR406523 vs. TAIR peptide
Match: AT2G33385.1 (| Symbols: arpc2b | actin-related protein C2B | chr2:14147604-14149769 REVERSE LENGTH=365)

HSP 1 Score: 162.925 bits (411), Expect = 4.878e-41
Identity = 76/128 (59.38%), Postives = 101/128 (78.91%), Query Frame = 3

Query:    3 QRIIAVFPIRFREKSDVIIATTFFQELMDVGNSDKWTKAPPCTWSAIPPPELRGEAFEDLSTNGGFVSFDISSRHVEGNRLDKTVWNLLNFNAYVRYHVKSTKGFIQRRMRKRLEDLVEVLHQTNSEE 386
            ++I AVFP+ F++ SDV+IAT+FFQ++          KAP C+WS IPP +LRGE  +DL+TN GFVSFDI+SRH+EG RLDKTVWNLLNF A  +YH+K ++G+IQRRMRKR+E LV++L+ T+ EE
Sbjct:  170 EKITAVFPMNFKDNSDVVIATSFFQDM---------GKAPQCSWSPIPPLQLRGEPVQDLTTNSGFVSFDITSRHIEGKRLDKTVWNLLNFYACAKYHIKCSRGYIQRRMRKRMETLVKLLNNTSLEE 288

[Close]

BLAST of GR406523 vs. TAIR peptide
Match: AT1G30825.1 (| Symbols: ARPC2A, DIS2 | Arp2/3 complex, 34 kD subunit p34-Arc | chr1:10961106-10962999 FORWARD LENGTH=318)

HSP 1 Score: 127.872 bits (320), Expect = 1.739e-30
Identity = 58/131 (44.27%), Postives = 84/131 (64.12%), Query Frame = 3

Query:    6 RIIAVFPIRFREKSDVIIATTFFQELMDVGNSDKWTKAPPCTWSAIPPPELRGEAFEDLSTNGGFVSFDISSRHVEGNRLDKTVWNLLNFNAYVRYHVKSTKGFIQRRMRKRLEDLVEVLHQTNSEENEQT 398
            ++   FP+RF++  D I+AT+F +E ++   +     AP C+WS   P EL G   E LS N GFV+F I  RHVEG +LD+TVWNL  F+AYV YHVK ++GF+  RMR+R+E +++ L Q    E  ++
Sbjct:  168 KVTVAFPMRFKDSVDTILATSFLKEFVEARRAAALNTAPSCSWSPTAPQELEGAPKETLSANAGFVTFVIFPRHVEGKKLDRTVWNLSTFHAYVSYHVKFSEGFMHTRMRRRVESMIQALDQAKPLEKTRS 298

The following BLAST results are available for this feature:

BLAST of GR406523 vs. SwissProt
BLAST of GR406523 vs. TrEMBL
BLAST of GR406523 vs. TAIR peptide

BLAST of GR406523 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
ARPC2_DICDI	6.778e-12	32.28	Actin-related protein 2/3 complex subunit 2 OS=Dic...	[more]
ARPC2_DROME	1.156e-11	33.33	Probable actin-related protein 2/3 complex subunit...	[more]
ARPC2_SCHPO	7.494e-11	29.13	Actin-related protein 2/3 complex subunit 2 OS=Sch...	[more]
ARPC2_PONAB	9.788e-11	28.46	Actin-related protein 2/3 complex subunit 2 OS=Pon...	[more]
ARPC2_HUMAN	9.788e-11	28.46	Actin-related protein 2/3 complex subunit 2 OS=Hom...	[more]
ARPC2_BOVIN	9.788e-11	28.46	Actin-related protein 2/3 complex subunit 2 OS=Bos...	[more]
ARPC2_RAT	1.278e-10	28.46	Actin-related protein 2/3 complex subunit 2 OS=Rat...	[more]
ARPC2_MOUSE	1.278e-10	28.46	Actin-related protein 2/3 complex subunit 2 OS=Mus...	[more]
ARPC2_CAEEL	1.278e-10	29.13	Probable actin-related protein 2/3 complex subunit...	[more]
ARPC2_ANOGA	1.278e-10	30.95	Probable actin-related protein 2/3 complex subunit...	[more]

BLAST of GR406523 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9SQV5_RICCO	6.990e-55	79.23	Putative uncharacterized protein OS=Ricinus commun...	[more]
D7SZM6_VITVI	7.728e-54	77.69	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9HSS9_POPTR	8.544e-53	82.64	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
B9HKT7_POPTR	6.770e-50	78.99	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A5BZC6_VITVI	6.137e-43	82.00	Putative uncharacterized protein OS=Vitis vinifera...	[more]
D7LG97_ARALY	5.744e-41	62.50	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
Q3EBP4_ARATH	9.171e-39	59.38	Putative uncharacterized protein At2g33385.1 OS=Ar...	[more]
Q7XPZ3_ORYSJ	4.552e-38	54.20	OSJNBa0004N05.15 protein OS=Oryza sativa subsp. ja...	[more]
Q01HD5_ORYSA	4.552e-38	54.20	OSIGBa0157K09-H0214G12.22 protein OS=Oryza sativa ...	[more]
B8ARQ7_ORYSI	4.552e-38	54.20	Putative uncharacterized protein OS=Oryza sativa s...	[more]

BLAST of GR406523 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT2G33385.2	3.264e-45	62.50	\| Symbols: arpc2b \| actin-related protein C2B \| ch...	[more]
AT2G33385.1	4.878e-41	59.38	\| Symbols: arpc2b \| actin-related protein C2B \| ch...	[more]
AT1G30825.1	1.739e-30	44.27	\| Symbols: ARPC2A, DIS2 \| Arp2/3 complex, 34 kD su...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007188	Arp2/3 complex, 34kDa subunit p34-Arc	PANTHER	PTHR12058	ARP2/3 COMPLEX 34 KDA SUBUNIT	coord: 2..131 score: 1.9
IPR007188	Arp2/3 complex, 34kDa subunit p34-Arc	PFAM	PF04045	P34-Arc	coord: 2..129 score: 3.8
None	No IPR available	GENE3D	3.30.1460.20	no description	coord: 2..125 score: 4.1
None	No IPR available	SUPERFAMILY	69645	Arp2/3 complex subunits	coord: 1..128 score: 2.3

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR406523 ID=GR406523; Name=GR406523; organism=Cicer arietinum; type=EST; length=398bp
CACAAAGAATCATAGCAGTATTCCCAATTCGTTTCCGAGAAAAGTCAGAC
GTCATTATCGCAACAACTTTCTTTCAGGAGCTCATGGATGTTGGAAATTC
AGATAAATGGACAAAGGCACCACCTTGCACCTGGTCAGCCATTCCTCCAC
CAGAGTTGAGAGGAGAAGCTTTTGAGGATTTGAGTACCAATGGAGGGTTT
GTCTCCTTTGATATCTCTTCTCGGCATGTTGAAGGCAATAGGTTAGACAA
AACTGTCTGGAATCTATTAAATTTTAATGCCTATGTTAGATACCATGTAA
AGAGTACCAAAGGTTTCATTCAAAGAAGGATGAGGAAACGTTTGGAAGAT
TTGGTTGAGGTTCTTCACCAAACAAACTCAGAAGAAAATGAGCAAACC

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005856	cytoskeleton

Vocabulary: **Biological Process**
Term	Definition
GO:0030833	regulation of actin filament polymerization

Vocabulary: **INTERPRO**
Term	Definition
IPR007188	ARPC2

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