GR407722

EST Overview


Name	GR407722
Unique Name	GR407722
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	801

Libraries


Library Name	Type
LIBEST_024786 JG11 Salinity-stressed chickpea root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

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BLAST of GR407722 vs. SwissProt
Match: COPD_ARATH (Coatomer subunit delta OS=Arabidopsis thaliana GN=At5g05010 PE=1 SV=2)

HSP 1 Score: 278.485 bits (711), Expect = 3.069e-74
Identity = 136/175 (77.71%), Postives = 151/175 (86.29%), Query Frame = 1

Query:   10 LGLKDPNRPFPTGQASDAGGVGLLKWRMQSTDESMVPLTINCWPSSSGNETYVNIEYEASSMFDLQNVVISVPLPALREAPSVSQIDGEWRYDPRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFMATDTFSDLKVTNIIPLKGGN--PPKFSQRTQLITENYQVV 528
            LGLK P++PFPTGQ  D  GVGLL+WRMQ  DESMVPLTINCWPS SGNETYV++EYEASSMFDL NV+ISVPLPALREAPSV Q DGEWRYDPRNS+LEWS+LLIDNSNRSGSMEFVVP  DSS FFPISV+F AT T+S LKVT +IPL+GG    P+F QRTQLI +NYQV+
Sbjct:  355 LGLKRPDQPFPTGQGGD--GVGLLRWRMQRADESMVPLTINCWPSVSGNETYVSLEYEASSMFDLTNVIISVPLPALREAPSVRQCDGEWRYDPRNSVLEWSILLIDNSNRSGSMEFVVPPVDSSVFFPISVQFAATSTYSGLKVTGMIPLRGGGGATPRFVQRTQLIAQNYQVI 527

[Close]

BLAST of GR407722 vs. SwissProt
Match: COPD2_ORYSJ (Coatomer subunit delta-2 OS=Oryza sativa subsp. japonica GN=Os05g0311000 PE=2 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 3.512e-70
Identity = 127/173 (73.41%), Postives = 143/173 (82.66%), Query Frame = 1

Query:   10 LGLKDPNRPFPTGQASDAGGVGLLKWRMQSTDESMVPLTINCWPSSSGNETYVNIEYEASSMFDLQNVVISVPLPALREAPSVSQIDGEWRYDPRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFMATDTFSDLKVTNIIPLKGGNPPKFSQRTQLITENYQVV 528
            +G KDPNRPFP+GQ        L+KWR+   DES +PL++NCWPS SGNETYVNIEYEA+ MFDL NVVIS+PLPALREAPSV QIDGEWRYD RNS+LEWS+LLID SNRSGSMEFVVP AD S FFPIS+ F A+ TFSDLKVT I PLK GNPPK+SQR +L+T NYQVV
Sbjct:  355 VGAKDPNRPFPSGQNETP----LVKWRIHGMDESSLPLSVNCWPSVSGNETYVNIEYEAAEMFDLHNVVISIPLPALREAPSVRQIDGEWRYDSRNSVLEWSILLIDQSNRSGSMEFVVPPADPSTFFPISIGFSASSTFSDLKVTGIRPLKDGNPPKYSQRARLVTANYQVV 523

[Close]

BLAST of GR407722 vs. SwissProt
Match: COPD1_ORYSJ (Coatomer subunit delta-1 OS=Oryza sativa subsp. japonica GN=Os05g0310800 PE=2 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 2.973e-69
Identity = 125/173 (72.25%), Postives = 143/173 (82.66%), Query Frame = 1

Query:   10 LGLKDPNRPFPTGQASDAGGVGLLKWRMQSTDESMVPLTINCWPSSSGNETYVNIEYEASSMFDLQNVVISVPLPALREAPSVSQIDGEWRYDPRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFMATDTFSDLKVTNIIPLKGGNPPKFSQRTQLITENYQVV 528
            +G KDPNRPFP+GQ        L+KWR+Q  DES +PL++NCWPS SG+ETYVNIEYEA+ MFDL NVVIS+PLPALREAPSV QIDGEW+YD RNS+LEWS+LLID SNRSGSMEFVVP AD S FFPIS+ F A+ TFSDLKVT I PLK GNPPK+SQR +L+  NYQVV
Sbjct:  356 VGAKDPNRPFPSGQNETP----LVKWRIQGMDESSLPLSVNCWPSVSGSETYVNIEYEAAEMFDLHNVVISIPLPALREAPSVRQIDGEWKYDSRNSVLEWSILLIDQSNRSGSMEFVVPPADPSTFFPISIGFSASSTFSDLKVTGIRPLKDGNPPKYSQRARLVAANYQVV 524

[Close]

BLAST of GR407722 vs. SwissProt
Match: COPD3_ORYSJ (Coatomer subunit delta-3 OS=Oryza sativa subsp. japonica GN=Os01g0833700 PE=2 SV=2)

HSP 1 Score: 257.684 bits (657), Expect = 5.607e-68
Identity = 123/173 (71.10%), Postives = 142/173 (82.08%), Query Frame = 1

Query:   10 LGLKDPNRPFPTGQASDAGGVGLLKWRMQSTDESMVPLTINCWPSSSGNETYVNIEYEASSMFDLQNVVISVPLPALREAPSVSQIDGEWRYDPRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFMATDTFSDLKVTNIIPLKGGNPPKFSQRTQLITENYQVV 528
            +G KDPNRPFP+GQ        L+KWR+Q  +ES +PL +NCWPS SGNETYVNIEYEAS MFDL NVVIS+PLPALREAP V QIDGEWRYD RNS+LEWS++L+D SNRSGS+EF VP AD S FFPISV F A++TFSDLKVT I PL+ G+PPKFSQR +L+T NYQVV
Sbjct:  350 VGAKDPNRPFPSGQNETP----LVKWRIQELNESSLPLAVNCWPSVSGNETYVNIEYEASEMFDLHNVVISIPLPALREAPGVRQIDGEWRYDSRNSVLEWSIILVDQSNRSGSLEFTVPAADPSTFFPISVGFSASNTFSDLKVTAIRPLREGSPPKFSQRNRLVTYNYQVV 518

[Close]

BLAST of GR407722 vs. SwissProt
Match: COPD4_ORYSJ (Coatomer subunit delta-4 OS=Oryza sativa subsp. japonica GN=Os08g0368000 PE=2 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 3.761e-64
Identity = 118/174 (67.82%), Postives = 142/174 (81.61%), Query Frame = 1

Query:   10 LGLKDPNRPFPTGQASDAGGVGLLKWRMQSTDESMVPLTINCWPSSSGNETYVNIEYEASSMFDLQNVVISVPLPALREAPSVSQIDGEWRYDPRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFMATDTFSDLKVTNIIPL-KGGNPPKFSQRTQLITENYQVV 528
            LG KDP RPFP+GQ        L+KWR+Q  +ES +PL++NCWPS  GNETYVNIEYEAS MFDL +V+IS+PLPALREAP V QIDGEW+YD RNS+LEWS++LID SNRSGSMEFVVP AD S F+PISV F A++TFS++KVT I PL +G NPPK+SQR +L+ +NYQVV
Sbjct:  207 LGAKDPIRPFPSGQNETP----LVKWRIQGMNESSLPLSVNCWPSILGNETYVNIEYEASEMFDLHSVIISIPLPALREAPRVRQIDGEWKYDSRNSVLEWSIILIDQSNRSGSMEFVVPPADPSMFYPISVGFSASNTFSNVKVTGIRPLNEGSNPPKYSQRVRLVADNYQVV 376

[Close]

BLAST of GR407722 vs. SwissProt
Match: COPD_RAT (Coatomer subunit delta OS=Rattus norvegicus GN=Arcn1 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.078e-38
Identity = 76/177 (42.94%), Postives = 116/177 (65.54%), Query Frame = 1

Query:    1 EYKLGLKDPNRPFPTGQASDAGGVGLLKWRMQSTDESMVPLTINCWPSSSGNETYVNIEYE-ASSMFDLQNVVISVPLPALREAPSVSQIDGEWRYDPRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFMATDTFSDLKVTNIIPLKGGNPPKFSQRTQLITENYQVV 528
            E  +GLK+P + FP         VG+LKWR+Q+T+ES +PLTINCWPS SGN   VNIEYE      +L +VVI++PLP+   AP + +IDGE+R+D R + LEW + +ID  N+SGS+EF +P    + FFP+ V F++   + +++VT +  + G +P +FS  T  + + Y+++
Sbjct:  341 ESLIGLKNPEKSFPVNS-----DVGVLKWRLQTTEESFIPLTINCWPSESGNGCDVNIEYELQEDNLELNDVVITIPLPSGVGAPVIGEIDGEYRHDSRRNTLEWCLPVIDAKNKSGSLEFSIP-GQPNDFFPVQVSFISKKNYCNIQVTKVTQVDGNSPVRFSTETTFLVDKYEIL 511

[Close]

BLAST of GR407722 vs. SwissProt
Match: COPD_MOUSE (Coatomer subunit delta OS=Mus musculus GN=Arcn1 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.078e-38
Identity = 76/177 (42.94%), Postives = 116/177 (65.54%), Query Frame = 1

Query:    1 EYKLGLKDPNRPFPTGQASDAGGVGLLKWRMQSTDESMVPLTINCWPSSSGNETYVNIEYE-ASSMFDLQNVVISVPLPALREAPSVSQIDGEWRYDPRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFMATDTFSDLKVTNIIPLKGGNPPKFSQRTQLITENYQVV 528
            E  +GLK+P + FP         VG+LKWR+Q+T+ES +PLTINCWPS SGN   VNIEYE      +L +VVI++PLP+   AP + +IDGE+R+D R + LEW + +ID  N+SGS+EF +P    + FFP+ V F++   + +++VT +  + G +P +FS  T  + + Y+++
Sbjct:  341 ESLIGLKNPEKSFPVNS-----DVGVLKWRLQTTEESFIPLTINCWPSESGNGCDVNIEYELQEDNLELNDVVITIPLPSGVGAPVIGEIDGEYRHDSRRNTLEWCLPVIDAKNKSGSLEFSIP-GQPNDFFPVQVSFISKKNYCNIQVTKVTQVDGNSPVRFSTETTFLVDKYEIL 511

[Close]

BLAST of GR407722 vs. SwissProt
Match: COPD_CHICK (Coatomer subunit delta OS=Gallus gallus GN=ARCN1 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.545e-38
Identity = 75/177 (42.37%), Postives = 116/177 (65.54%), Query Frame = 1

Query:    1 EYKLGLKDPNRPFPTGQASDAGGVGLLKWRMQSTDESMVPLTINCWPSSSGNETYVNIEYE-ASSMFDLQNVVISVPLPALREAPSVSQIDGEWRYDPRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFMATDTFSDLKVTNIIPLKGGNPPKFSQRTQLITENYQVV 528
            E ++GLK+P + FP         VG+LKWR+Q+T+ES +PLTINCWPS SGN   VNIEYE      +L +VVI +PLP+   AP + +IDGE+R+D R ++LEW + +ID  N+SGS+EF +     + FFP+ V F++   + +++VT +  + G +P +FS  T  + + Y+++
Sbjct:  340 ESQIGLKNPEKSFPINS-----DVGVLKWRLQTTEESFIPLTINCWPSESGNSCDVNIEYELQEESLELNDVVIMIPLPSGVGAPVIGEIDGEYRHDSRRNLLEWCLPVIDAKNKSGSLEFSI-AGQPNDFFPVQVSFISKKNYCNIQVTKVTQVDGNSPVRFSTETTFLVDKYEIL 510

[Close]

BLAST of GR407722 vs. SwissProt
Match: COPD_PONAB (Coatomer subunit delta OS=Pongo abelii GN=ARCN1 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.759e-37
Identity = 75/177 (42.37%), Postives = 115/177 (64.97%), Query Frame = 1

Query:    1 EYKLGLKDPNRPFPTGQASDAGGVGLLKWRMQSTDESMVPLTINCWPSSSGNETYVNIEYE-ASSMFDLQNVVISVPLPALREAPSVSQIDGEWRYDPRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFMATDTFSDLKVTNIIPLKGGNPPKFSQRTQLITENYQVV 528
            E  +GLK+P + FP         VG+LKWR+Q+T+ES +PLTINCWPS SGN   VNIEYE      +L +VVI++PLP+   AP + +IDGE+R+D R + LEW + +ID  N+SGS+EF +     + FFP+ V F++   + +++VT +  + G +P +FS  T  + + Y+++
Sbjct:  341 ESLIGLKNPEKSFPVNS-----DVGVLKWRLQTTEESFIPLTINCWPSESGNGCDVNIEYELQEDNLELNDVVITIPLPSGVGAPVIGEIDGEYRHDSRRNTLEWCLPVIDAKNKSGSLEFSI-AGQPNDFFPVQVSFVSKKNYCNIQVTKVTQVDGNSPVRFSTETTFLVDKYEIL 511

[Close]

BLAST of GR407722 vs. SwissProt
Match: COPD_HUMAN (Coatomer subunit delta OS=Homo sapiens GN=ARCN1 PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.759e-37
Identity = 75/177 (42.37%), Postives = 115/177 (64.97%), Query Frame = 1

Query:    1 EYKLGLKDPNRPFPTGQASDAGGVGLLKWRMQSTDESMVPLTINCWPSSSGNETYVNIEYE-ASSMFDLQNVVISVPLPALREAPSVSQIDGEWRYDPRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFMATDTFSDLKVTNIIPLKGGNPPKFSQRTQLITENYQVV 528
            E  +GLK+P + FP         VG+LKWR+Q+T+ES +PLTINCWPS SGN   VNIEYE      +L +VVI++PLP+   AP + +IDGE+R+D R + LEW + +ID  N+SGS+EF +     + FFP+ V F++   + +++VT +  + G +P +FS  T  + + Y+++
Sbjct:  341 ESLIGLKNPEKSFPVNS-----DVGVLKWRLQTTEESFIPLTINCWPSESGNGCDVNIEYELQEDNLELNDVVITIPLPSGVGAPVIGEIDGEYRHDSRRNTLEWCLPVIDAKNKSGSLEFSI-AGQPNDFFPVQVSFVSKKNYCNIQVTKVTQVDGNSPVRFSTETTFLVDKYEIL 511

[Close]

BLAST of GR407722 vs. TrEMBL
Match: D7T9L8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_11.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00012108001 PE=4 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 4.236e-82
Identity = 150/173 (86.71%), Postives = 157/173 (90.75%), Query Frame = 1

Query:   10 LGLKDPNRPFPTGQASDAGGVGLLKWRMQSTDESMVPLTINCWPSSSGNETYVNIEYEASSMFDLQNVVISVPLPALREAPSVSQIDGEWRYDPRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFMATDTFSDLKVTNIIPLKGGNPPKFSQRTQLITENYQVV 528
            LGLKDPNRPFPTGQ  DA GVGLLKWRMQS DES VPLTINCWPS SGNETYV+IEYEASSMFDL+NVVISVPLPALREAP+V QIDGEWRYD RNSILEWS+LLIDNSNRSGSMEFVVP ADSS FFPISVRF A  TFSDLKV N++PL+GG PPKFSQRT LITENYQVV
Sbjct:  389 LGLKDPNRPFPTGQGGDAAGVGLLKWRMQSVDESDVPLTINCWPSVSGNETYVSIEYEASSMFDLRNVVISVPLPALREAPNVRQIDGEWRYDSRNSILEWSILLIDNSNRSGSMEFVVPPADSSVFFPISVRFTAAKTFSDLKVVNVLPLRGGPPPKFSQRTTLITENYQVV 561

[Close]

BLAST of GR407722 vs. TrEMBL
Match: A5B542_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008875 PE=4 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 4.236e-82
Identity = 150/173 (86.71%), Postives = 157/173 (90.75%), Query Frame = 1

Query:   10 LGLKDPNRPFPTGQASDAGGVGLLKWRMQSTDESMVPLTINCWPSSSGNETYVNIEYEASSMFDLQNVVISVPLPALREAPSVSQIDGEWRYDPRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFMATDTFSDLKVTNIIPLKGGNPPKFSQRTQLITENYQVV 528
            LGLKDPNRPFPTGQ  DA GVGLLKWRMQS DES VPLTINCWPS SGNETYV+IEYEASSMFDL+NVVISVPLPALREAP+V QIDGEWRYD RNSILEWS+LLIDNSNRSGSMEFVVP ADSS FFPISVRF A  TFSDLKV N++PL+GG PPKFSQRT LITENYQVV
Sbjct:  359 LGLKDPNRPFPTGQGGDAAGVGLLKWRMQSVDESDVPLTINCWPSVSGNETYVSIEYEASSMFDLRNVVISVPLPALREAPNVRQIDGEWRYDSRNSILEWSILLIDNSNRSGSMEFVVPPADSSVFFPISVRFTAAKTFSDLKVVNVLPLRGGPPPKFSQRTTLITENYQVV 531

[Close]

BLAST of GR407722 vs. TrEMBL
Match: B9I4N7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_570607 PE=4 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 3.036e-80
Identity = 148/172 (86.05%), Postives = 158/172 (91.86%), Query Frame = 1

Query:   10 LGLKDPNRPFPTGQASDAGGVGLLKWRMQSTDESMVPLTINCWPSSSGNETYVNIEYEASSMFDLQNVVISVPLPALREAPSVSQIDGEWRYDPRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFMATDTFSDLKVTNIIPLKGGNPPKFSQRTQLITENYQV 525
            LGL+DP+RPFPTGQ  DAG VGLLKWRMQS DESMVPLTINCWPS SGNET+V+IEYEASSMFDL+NV ISVPLPALRE PSV QIDGEWRYD RNSILEWS+LLIDNSNRSGSMEFVVP ADSS+FFPISVRF AT T+S+LKV NI+PLKGG PPKFSQRTQLITENYQV
Sbjct:  358 LGLRDPSRPFPTGQTGDAG-VGLLKWRMQSADESMVPLTINCWPSVSGNETFVSIEYEASSMFDLRNVAISVPLPALREPPSVRQIDGEWRYDSRNSILEWSILLIDNSNRSGSMEFVVPPADSSSFFPISVRFSATSTYSELKVVNILPLKGGAPPKFSQRTQLITENYQV 528

[Close]

BLAST of GR407722 vs. TrEMBL
Match: B9ICR4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_824854 PE=4 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 2.570e-79
Identity = 146/173 (84.39%), Postives = 158/173 (91.33%), Query Frame = 1

Query:   10 LGLKDPNRPFPTGQASDAGGVGLLKWRMQSTDESMVPLTINCWPSSSGNETYVNIEYEASSMFDLQNVVISVPLPALREAPSVSQIDGEWRYDPRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFMATDTFSDLKVTNIIPLKGGNPPKFSQRTQLITENYQVV 528
            LGL+DP+RPFP  Q  DAG VGLLKWRMQS DESMVPLTINCWPS SGNETYV+IEYEASSMFDL+NVVI+VPLPALREAP+V QIDGEWRYD RNSILEWS+LLIDNSNRSGSMEFVVP  DSSAFFPI+V+F AT T+S+LKV NI+PLKGG PPKFSQRTQLITENYQVV
Sbjct:  358 LGLRDPSRPFPACQTGDAG-VGLLKWRMQSVDESMVPLTINCWPSESGNETYVSIEYEASSMFDLRNVVIAVPLPALREAPNVRQIDGEWRYDARNSILEWSILLIDNSNRSGSMEFVVPSGDSSAFFPITVQFSATSTYSELKVANILPLKGGAPPKFSQRTQLITENYQVV 529

[Close]

BLAST of GR407722 vs. TrEMBL
Match: B9SKR2_RICCO (Coatomer delta subunit, putative OS=Ricinus communis GN=RCOM_1604100 PE=4 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 5.359e-77
Identity = 140/173 (80.92%), Postives = 153/173 (88.44%), Query Frame = 1

Query:   10 LGLKDPNRPFPTGQASDAGGVGLLKWRMQSTDESMVPLTINCWPSSSGNETYVNIEYEASSMFDLQNVVISVPLPALREAPSVSQIDGEWRYDPRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFMATDTFSDLKVTNIIPLKGGNPPKFSQRTQLITENYQVV 528
            LGLKDPNRPFPTG   D  GVGLLKWRMQ  DESMVPLTINCWPS SGN+T+V+IEYEASSMFDL+NVVISVPLPALREAPSV  IDGEWRYD RNS+LEWS+LLIDNSNRSG MEFVVP ADSS FFPISVRF AT T+SDLKV N++PL+GG  PKF+QRTQLI E+YQ+V
Sbjct:  359 LGLKDPNRPFPTG-TGDPAGVGLLKWRMQGADESMVPLTINCWPSVSGNQTFVSIEYEASSMFDLRNVVISVPLPALREAPSVGDIDGEWRYDSRNSVLEWSILLIDNSNRSGQMEFVVPPADSSTFFPISVRFSATSTYSDLKVVNVLPLRGGPSPKFAQRTQLIAESYQIV 530

[Close]

BLAST of GR407722 vs. TrEMBL
Match: D5A9J3_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 1.235e-73
Identity = 129/176 (73.30%), Postives = 152/176 (86.36%), Query Frame = 1

Query:    1 EYKLGLKDPNRPFPTGQASDAGGVGLLKWRMQSTDESMVPLTINCWPSSSGNETYVNIEYEASSMFDLQNVVISVPLPALREAPSVSQIDGEWRYDPRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFMATDTFSDLKVTNIIPLKGGNPPKFSQRTQLITENYQVV 528
            E  LGLKDP+RPFP G   DA GVGL+KWRMQS DE++VPL+INCWPS SG ETYVNIEYEAS MFDLQNVVIS+PLPA+R+ P+V+Q+DG+WRYD R S+LEW++LLIDNSN SGSMEFVVP+AD SAFFPI VRF A  TF D+KV +++PLKGG PPKF+ RTQ++TENYQVV
Sbjct:  354 ENLLGLKDPSRPFPAGPTGDALGVGLVKWRMQSADETLVPLSINCWPSVSGGETYVNIEYEASKMFDLQNVVISIPLPAIRDPPTVNQVDGDWRYDSRRSVLEWTILLIDNSNSSGSMEFVVPKADPSAFFPIDVRFTAARTFCDIKVVSVLPLKGGPPPKFAYRTQMVTENYQVV 529

[Close]

BLAST of GR407722 vs. TrEMBL
Match: B9DGK9_ARATH (AT5G05010 protein OS=Arabidopsis thaliana GN=At5g05010 PE=2 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 4.695e-73
Identity = 136/175 (77.71%), Postives = 151/175 (86.29%), Query Frame = 1

Query:   10 LGLKDPNRPFPTGQASDAGGVGLLKWRMQSTDESMVPLTINCWPSSSGNETYVNIEYEASSMFDLQNVVISVPLPALREAPSVSQIDGEWRYDPRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFMATDTFSDLKVTNIIPLKGGN--PPKFSQRTQLITENYQVV 528
            LGLK P++PFPTGQ  D  GVGLL+WRMQ  DESMVPLTINCWPS SGNETYV++EYEASSMFDL NV+ISVPLPALREAPSV Q DGEWRYDPRNS+LEWS+LLIDNSNRSGSMEFVVP  DSS FFPISV+F AT T+S LKVT +IPL+GG    P+F QRTQLI +NYQV+
Sbjct:  355 LGLKRPDQPFPTGQGGD--GVGLLRWRMQRADESMVPLTINCWPSVSGNETYVSLEYEASSMFDLTNVIISVPLPALREAPSVRQCDGEWRYDPRNSVLEWSILLIDNSNRSGSMEFVVPPVDSSVFFPISVQFAATSTYSGLKVTGMIPLRGGGGATPRFVQRTQLIAQNYQVI 527

[Close]

BLAST of GR407722 vs. TrEMBL
Match: D7LY84_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_908393 PE=4 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 4.394e-71
Identity = 133/175 (76.00%), Postives = 150/175 (85.71%), Query Frame = 1

Query:   10 LGLKDPNRPFPTGQASDAGGVGLLKWRMQSTDESMVPLTINCWPSSSGNETYVNIEYEASSMFDLQNVVISVPLPALREAPSVSQIDGEWRYDPRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFMATDTFSDLKVTNIIPLKGGN--PPKFSQRTQLITENYQVV 528
            LGLK P++PFPTGQ  D  GVGLL+WRMQ  DESMVPLTINCWPS SGNETYV++EYEASS+FDL NV+ISVPLPALREAPSV Q DGEWRY+PRNS+LEWS+LLIDNSNRSGSMEFVVP  DSS FFPISV+F AT T+S LKVT +IPL GG    P+F QRTQLI ++YQV+
Sbjct:  355 LGLKRPDQPFPTGQGGD--GVGLLRWRMQKADESMVPLTINCWPSVSGNETYVSLEYEASSIFDLTNVIISVPLPALREAPSVRQCDGEWRYNPRNSVLEWSILLIDNSNRSGSMEFVVPPVDSSVFFPISVQFAATSTYSGLKVTGMIPLGGGGGAAPRFVQRTQLIAQSYQVI 527

[Close]

BLAST of GR407722 vs. TrEMBL
Match: Q9M640_MAIZE (Delta-COP OS=Zea mays PE=2 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 2.181e-70
Identity = 130/173 (75.14%), Postives = 146/173 (84.39%), Query Frame = 1

Query:   10 LGLKDPNRPFPTGQASDAGGVGLLKWRMQSTDESMVPLTINCWPSSSGNETYVNIEYEASSMFDLQNVVISVPLPALREAPSVSQIDGEWRYDPRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFMATDTFSDLKVTNIIPLKGGNPPKFSQRTQLITENYQVV 528
            LG KDPNRPFP+GQ        L+KWR+Q  DES +PL++NCWPS SGNETYVNIEYEAS MFDL NVVIS+PLPALREAPSV QIDGEW++D RNS+LEWS+LLID SNRSGSMEFVVP AD S+FFPISV F A+ TFSDLKVT I+PLK GNPPKFSQR +L+T NYQVV
Sbjct:  355 LGAKDPNRPFPSGQNETP----LVKWRIQGMDESSLPLSVNCWPSVSGNETYVNIEYEASEMFDLHNVVISIPLPALREAPSVRQIDGEWKFDSRNSVLEWSILLIDQSNRSGSMEFVVPPADPSSFFPISVGFSASSTFSDLKVTGILPLKEGNPPKFSQRARLLTANYQVV 523

[Close]

BLAST of GR407722 vs. TrEMBL
Match: B6TDR8_MAIZE (Coatomer subunit delta OS=Zea mays PE=2 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 1.414e-69
Identity = 129/173 (74.57%), Postives = 145/173 (83.82%), Query Frame = 1

Query:   10 LGLKDPNRPFPTGQASDAGGVGLLKWRMQSTDESMVPLTINCWPSSSGNETYVNIEYEASSMFDLQNVVISVPLPALREAPSVSQIDGEWRYDPRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFMATDTFSDLKVTNIIPLKGGNPPKFSQRTQLITENYQVV 528
            LG KDPNRPFP+GQ        L+KWR+Q  DES +PL++NCWPS SGNETYVNIEYEAS MFDL NVVIS+PLPA+REAPSV QIDGEW+ D RNS+LEWS+LLID SNRSGSMEFVVP AD S+FFPISV F A+ TFSDLKVT I+PLK GNPPKFSQR +L+T NYQVV
Sbjct:  349 LGAKDPNRPFPSGQNETP----LVKWRIQGMDESSLPLSVNCWPSVSGNETYVNIEYEASEMFDLHNVVISIPLPAVREAPSVRQIDGEWKLDSRNSVLEWSILLIDQSNRSGSMEFVVPPADPSSFFPISVGFSASSTFSDLKVTGILPLKEGNPPKFSQRARLLTANYQVV 517

[Close]

BLAST of GR407722 vs. TAIR peptide
Match: AT5G05010.2 (| Symbols: | clathrin adaptor complexes medium subunit family protein | chr5:1477137-1479872 FORWARD LENGTH=527)

HSP 1 Score: 278.485 bits (711), Expect = 3.015e-75
Identity = 136/175 (77.71%), Postives = 151/175 (86.29%), Query Frame = 1

Query:   10 LGLKDPNRPFPTGQASDAGGVGLLKWRMQSTDESMVPLTINCWPSSSGNETYVNIEYEASSMFDLQNVVISVPLPALREAPSVSQIDGEWRYDPRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFMATDTFSDLKVTNIIPLKGGN--PPKFSQRTQLITENYQVV 528
            LGLK P++PFPTGQ  D  GVGLL+WRMQ  DESMVPLTINCWPS SGNETYV++EYEASSMFDL NV+ISVPLPALREAPSV Q DGEWRYDPRNS+LEWS+LLIDNSNRSGSMEFVVP  DSS FFPISV+F AT T+S LKVT +IPL+GG    P+F QRTQLI +NYQV+
Sbjct:  355 LGLKRPDQPFPTGQGGD--GVGLLRWRMQRADESMVPLTINCWPSVSGNETYVSLEYEASSMFDLTNVIISVPLPALREAPSVRQCDGEWRYDPRNSVLEWSILLIDNSNRSGSMEFVVPPVDSSVFFPISVQFAATSTYSGLKVTGMIPLRGGGGATPRFVQRTQLIAQNYQVI 527

[Close]

BLAST of GR407722 vs. TAIR peptide
Match: AT5G05010.1 (| Symbols: | clathrin adaptor complexes medium subunit family protein | chr5:1477137-1479872 FORWARD LENGTH=527)

HSP 1 Score: 278.485 bits (711), Expect = 3.015e-75
Identity = 136/175 (77.71%), Postives = 151/175 (86.29%), Query Frame = 1

Query:   10 LGLKDPNRPFPTGQASDAGGVGLLKWRMQSTDESMVPLTINCWPSSSGNETYVNIEYEASSMFDLQNVVISVPLPALREAPSVSQIDGEWRYDPRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFMATDTFSDLKVTNIIPLKGGN--PPKFSQRTQLITENYQVV 528
            LGLK P++PFPTGQ  D  GVGLL+WRMQ  DESMVPLTINCWPS SGNETYV++EYEASSMFDL NV+ISVPLPALREAPSV Q DGEWRYDPRNS+LEWS+LLIDNSNRSGSMEFVVP  DSS FFPISV+F AT T+S LKVT +IPL+GG    P+F QRTQLI +NYQV+
Sbjct:  355 LGLKRPDQPFPTGQGGD--GVGLLRWRMQRADESMVPLTINCWPSVSGNETYVSLEYEASSMFDLTNVIISVPLPALREAPSVRQCDGEWRYDPRNSVLEWSILLIDNSNRSGSMEFVVPPVDSSVFFPISVQFAATSTYSGLKVTGMIPLRGGGGATPRFVQRTQLIAQNYQVI 527

The following BLAST results are available for this feature:

BLAST of GR407722 vs. SwissProt
BLAST of GR407722 vs. TrEMBL
BLAST of GR407722 vs. TAIR peptide

BLAST of GR407722 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
COPD_ARATH	3.069e-74	77.71	Coatomer subunit delta OS=Arabidopsis thaliana GN=...	[more]
COPD2_ORYSJ	3.512e-70	73.41	Coatomer subunit delta-2 OS=Oryza sativa subsp. ja...	[more]
COPD1_ORYSJ	2.973e-69	72.25	Coatomer subunit delta-1 OS=Oryza sativa subsp. ja...	[more]
COPD3_ORYSJ	5.607e-68	71.10	Coatomer subunit delta-3 OS=Oryza sativa subsp. ja...	[more]
COPD4_ORYSJ	3.761e-64	67.82	Coatomer subunit delta-4 OS=Oryza sativa subsp. ja...	[more]
COPD_RAT	2.078e-38	42.94	Coatomer subunit delta OS=Rattus norvegicus GN=Arc...	[more]
COPD_MOUSE	2.078e-38	42.94	Coatomer subunit delta OS=Mus musculus GN=Arcn1 PE...	[more]
COPD_CHICK	3.545e-38	42.37	Coatomer subunit delta OS=Gallus gallus GN=ARCN1 P...	[more]
COPD_PONAB	1.759e-37	42.37	Coatomer subunit delta OS=Pongo abelii GN=ARCN1 PE...	[more]
COPD_HUMAN	1.759e-37	42.37	Coatomer subunit delta OS=Homo sapiens GN=ARCN1 PE...	[more]

BLAST of GR407722 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
D7T9L8_VITVI	4.236e-82	86.71	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5B542_VITVI	4.236e-82	86.71	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9I4N7_POPTR	3.036e-80	86.05	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9ICR4_POPTR	2.570e-79	84.39	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9SKR2_RICCO	5.359e-77	80.92	Coatomer delta subunit, putative OS=Ricinus commun...	[more]
D5A9J3_PICSI	1.235e-73	73.30	Putative uncharacterized protein OS=Picea sitchens...	[more]
B9DGK9_ARATH	4.695e-73	77.71	AT5G05010 protein OS=Arabidopsis thaliana GN=At5g0...	[more]
D7LY84_ARALY	4.394e-71	76.00	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
Q9M640_MAIZE	2.181e-70	75.14	Delta-COP OS=Zea mays PE=2 SV=1	[more]
B6TDR8_MAIZE	1.414e-69	74.57	Coatomer subunit delta OS=Zea mays PE=2 SV=1	[more]

BLAST of GR407722 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT5G05010.2	3.015e-75	77.71	\| Symbols: \| clathrin adaptor complexes medium su...	[more]
AT5G05010.1	3.015e-75	77.71	\| Symbols: \| clathrin adaptor complexes medium su...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008968	Clathrin adaptor, mu subunit, C-terminal	PFAM	PF00928	Adap_comp_sub	coord: 24..154 score: 6.2
IPR008968	Clathrin adaptor, mu subunit, C-terminal	PROFILE	PS51072	MHD	coord: 1..176 score: 34
IPR008968	Clathrin adaptor, mu subunit, C-terminal	SUPERFAMILY	49447	Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor	coord: 22..175 score: 1.2
None	No IPR available	GENE3D	2.60.40.1170	no description	coord: 51..137 score: 0.0
None	No IPR available	PANTHER	PTHR10121	COATOMER DELTA SUBUNIT	coord: 4..176 score: 3.8

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR407722 ID=GR407722; Name=GR407722; organism=Cicer arietinum; type=EST; length=801bp
GAATATAAATTAGGCCTGAAGGATCCAAATAGGCCCTTCCCCACTGGTCA
AGCCAGCGATGCCGGAGGTGTTGGTCTTTTAAAGTGGAGAATGCAAAGCA
CTGATGAGTCAATGGTGCCACTGACAATCAACTGTTGGCCCTCTTCTTCT
GGAAATGAAACTTATGTCAACATTGAATATGAGGCTTCATCAATGTTTGA
TCTGCAGAATGTTGTGATCTCAGTTCCTCTTCCAGCACTTCGTGAAGCAC
CGTCTGTTAGTCAGATTGATGGGGAGTGGAGGTATGACCCTAGGAACTCC
ATTTTGGAGTGGTCTGTCCTTCTGATTGATAATTCAAATCGCAGTGGTTC
AATGGAGTTTGTTGTTCCACAAGCAGATTCATCAGCATTCTTTCCCATTT
CAGTTCGTTTTATGGCAACTGATACATTTAGTGACCTGAAGGTTACAAAC
ATCATTCCGCTAAAGGGTGGTAATCCTCCCAAATTTTCTCAGAGAACACA
GTTGATAACGGAAAACTATCAAGTCGTGTGATCGATTTTTCTTTTGACTT
TGAGCTTCTATGACAGTTTTGCTTTTACAGTCGCAGTTCTTTTTTTCAAC
TGGCTTATATTTGCCCTGTTGCACCATTTGTAACCCATTCATGAGTTCAT
AATTTAGGTTTATTTCCGAAGCATAGCGGCCTTAAGTATGATTTATCATA
AACTCAAATGATTATCTATATACTCTATATTAATAGCATGTGTATTTTAA
GGGAAAGATGCCTTTCCCTTTCCCCGTTCTCTATTATGGAATACTATATG
T

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006886	intracellular protein transport
GO:0016192	vesicle-mediated transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0030131	clathrin adaptor complex

Vocabulary: **INTERPRO**
Term	Definition
IPR008968	Clathrin adaptor, mu subunit, C-terminal

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