GR409162

EST Overview
NameGR409162
Unique NameGR409162
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length711
Libraries
Library NameType
LIBEST_024779 ICC1882 Slow drought stressed root cDNA librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR409162 vs. TrEMBL
Match: Q9ZQ69_ARATH (Putative uncharacterized protein At2g03330 OS=Arabidopsis thaliana GN=At2g03330 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.982e-14
Identity = 38/50 (76.00%), Postives = 43/50 (86.00%), Query Frame = -2
Query:  270 STVLTILMLYNVAANTVLYMYCKAVHGELASEIAEEFAWQYVSLPFDDSK 419
            S +LT+LMLYN+ A TV+YMYCKAVHGEL  EIAEEFA +YVSLPFDD K
Sbjct:  324 SALLTLLMLYNLVATTVMYMYCKAVHGELVGEIAEEFAREYVSLPFDDGK 373          
BLAST of GR409162 vs. TrEMBL
Match: Q9SF17_ARATH (F26K24.10 protein OS=Arabidopsis thaliana GN=At3g11810 PE=4 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.933e-13
Identity = 38/50 (76.00%), Postives = 42/50 (84.00%), Query Frame = -2
Query:  270 STVLTILMLYNVAANTVLYMYCKAVHGELASEIAEEFAWQYVSLPFDDSK 419
            S  LT+L LYN+AA TV+YMYCKAVHGEL  EIAEEFA +YVSLPFDD K
Sbjct:  287 SAFLTLLTLYNLAATTVMYMYCKAVHGELVWEIAEEFAREYVSLPFDDGK 336          
BLAST of GR409162 vs. TrEMBL
Match: D7LQG5_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_484241 PE=4 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.933e-13
Identity = 38/50 (76.00%), Postives = 42/50 (84.00%), Query Frame = -2
Query:  270 STVLTILMLYNVAANTVLYMYCKAVHGELASEIAEEFAWQYVSLPFDDSK 419
            S  LT+L LYN+AA TV+YMYCKAVHGEL  EIAEEFA +YVSLPFDD K
Sbjct:  283 SAFLTLLTLYNLAATTVMYMYCKAVHGELVWEIAEEFAREYVSLPFDDGK 332          
BLAST of GR409162 vs. TrEMBL
Match: C6SVP3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.217e-12
Identity = 37/70 (52.86%), Postives = 41/70 (58.57%), Query Frame = 2
Query:  467 QISTGPLTVPFHTSLPSSCKPPQLFLPFLNHFHSLTDTXXXXXXXXXXXXXXXASLRPSGPYAWVQHTTG 676
            +IST     P   +LPS CKPPQ  LP  +HFHSLTDT               ASLRPSGPYAWVQ+T G
Sbjct:   25 RISTNASMAPICFALPSPCKPPQRLLPLWSHFHSLTDTRFPKRRPSERPRRKRASLRPSGPYAWVQYTPG 94          
BLAST of GR409162 vs. TrEMBL
Match: C6T3P1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.060e-11
Identity = 37/73 (50.68%), Postives = 41/73 (56.16%), Query Frame = 2
Query:  458 VTSQISTGPLTVPFHTSLPSSCKPPQLFLPFLNHFHSLTDTXXXXXXXXXXXXXXXASLRPSGPYAWVQHTTG 676
            +T +IST     PF  + PS CK PQ   P  NHFHSLTDT               ASLRPSGPYAWVQ+T G
Sbjct:   22 LTPRISTNASMAPFCPAFPSPCKTPQWLHPLWNHFHSLTDTRFPKRRPSEKPRRKRASLRPSGPYAWVQYTPG 94          
BLAST of GR409162 vs. TrEMBL
Match: B9HIB2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_803418 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.263e-11
Identity = 36/53 (67.92%), Postives = 39/53 (73.58%), Query Frame = -2
Query:  270 VKCSTVLTILMLYNVAANTVLYMYCKAVHGELASEIAEEFAWQYVSLPFDDSK 428
            V  S +  +L LYN+AA  VLYM CKAVHGEL  EIAEEFA  YVSLPFDD K
Sbjct:  271 VVTSALQMVLQLYNIAAFAVLYMDCKAVHGELVLEIAEEFAGDYVSLPFDDGK 323          
BLAST of GR409162 vs. TrEMBL
Match: C5YNG5_SORBI (Putative uncharacterized protein Sb08g011320 OS=Sorghum bicolor GN=Sb08g011320 PE=4 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 1.693e-9
Identity = 31/57 (54.39%), Postives = 40/57 (70.18%), Query Frame = -2
Query:  270 VREGVKCSTVLTILMLYNVAANTVLYMYCKAVHGELASEIAEEFAWQYVSLPFDDSK 440
            V + V  + +L ++MLY +  N VLYM+C+A+HGELA EI  EFA  YV LPFDD K
Sbjct:  245 VVKAVAGTALLAVMMLYGMVTNVVLYMHCRAMHGELAGEIYNEFANMYVFLPFDDGK 301          
BLAST of GR409162 vs. TrEMBL
Match: B8LMV5_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 2.211e-9
Identity = 29/61 (47.54%), Postives = 38/61 (62.30%), Query Frame = -2
Query:  270 LMMRVREGVKCSTVLTILMLYNVAANTVLYMYCKAVHGELASEIAEEFAWQYVSLPFDDSK 452
            L+ ++ + +     + +L LYN+A NTV YMYCKA H EL   I EEFA  Y+ LPF D K
Sbjct:  263 LLSKIVQSITVLAAMAVLFLYNIATNTVFYMYCKAHHDELLGAIMEEFAQDYIILPFQDQK 323          
BLAST of GR409162 vs. TrEMBL
Match: C6T3T3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 2.888e-9
Identity = 33/68 (48.53%), Postives = 36/68 (52.94%), Query Frame = 2
Query:  467 QISTGPLTVPFHTSLPSSCKPPQLFLPFLNHFHSLTDTXXXXXXXXXXXXXXXASLRPSGPYAWVQHT 670
            +IS      PF  + PS CKPPQ   P  N FHSLTDT               A LRPSGPYAWVQ+T
Sbjct:   25 RISINASMAPFCPAFPSPCKPPQWLHPLWNQFHSLTDTRFPKRRPSEKPRRKRACLRPSGPYAWVQYT 92          
BLAST of GR409162 vs. TrEMBL
Match: B4FH42_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 3.772e-9
Identity = 30/57 (52.63%), Postives = 40/57 (70.18%), Query Frame = -2
Query:  270 VREGVKCSTVLTILMLYNVAANTVLYMYCKAVHGELASEIAEEFAWQYVSLPFDDSK 440
            V + V  + +L ++MLY + AN VLYM+C+A+HGEL  EI  EFA  YV LP+DD K
Sbjct:  245 VVKAVAGTALLAVMMLYGMVANVVLYMHCRAMHGELTGEIYNEFANMYVFLPYDDGK 301          
BLAST of GR409162 vs. TAIR peptide
Match: AT2G03330.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11810.1); Has 370 Blast hits to 370 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 368; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr2:1008460-1014122 FORWARD LENGTH=385)

HSP 1 Score: 82.8037 bits (203), Expect = 2.022e-16
Identity = 38/50 (76.00%), Postives = 43/50 (86.00%), Query Frame = -2
Query:  270 STVLTILMLYNVAANTVLYMYCKAVHGELASEIAEEFAWQYVSLPFDDSK 419
            S +LT+LMLYN+ A TV+YMYCKAVHGEL  EIAEEFA +YVSLPFDD K
Sbjct:  324 SALLTLLMLYNLVATTVMYMYCKAVHGELVGEIAEEFAREYVSLPFDDGK 373          
BLAST of GR409162 vs. TAIR peptide
Match: AT3G11810.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G03330.1); Has 141 Blast hits to 141 proteins in 21 species: Archae - 0; Bacteria - 9; Metazoa - 0; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | chr3:3727819-3728865 FORWARD LENGTH=348)

HSP 1 Score: 80.1073 bits (196), Expect = 1.311e-15
Identity = 38/50 (76.00%), Postives = 42/50 (84.00%), Query Frame = -2
Query:  270 STVLTILMLYNVAANTVLYMYCKAVHGELASEIAEEFAWQYVSLPFDDSK 419
            S  LT+L LYN+AA TV+YMYCKAVHGEL  EIAEEFA +YVSLPFDD K
Sbjct:  287 SAFLTLLTLYNLAATTVMYMYCKAVHGELVWEIAEEFAREYVSLPFDDGK 336          
The following BLAST results are available for this feature:
BLAST of GR409162 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
Q9ZQ69_ARATH2.982e-1476.00Putative uncharacterized protein At2g03330 OS=Arab... [more]
Q9SF17_ARATH1.933e-1376.00F26K24.10 protein OS=Arabidopsis thaliana GN=At3g1... [more]
D7LQG5_ARALY1.933e-1376.00Putative uncharacterized protein OS=Arabidopsis ly... [more]
C6SVP3_SOYBN6.217e-1252.86Putative uncharacterized protein OS=Glycine max PE... [more]
C6T3P1_SOYBN1.060e-1150.68Putative uncharacterized protein OS=Glycine max PE... [more]
B9HIB2_POPTR5.263e-1167.92Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
C5YNG5_SORBI1.693e-954.39Putative uncharacterized protein Sb08g011320 OS=So... [more]
B8LMV5_PICSI2.211e-947.54Putative uncharacterized protein OS=Picea sitchens... [more]
C6T3T3_SOYBN2.888e-948.53Putative uncharacterized protein OS=Glycine max PE... [more]
B4FH42_MAIZE3.772e-952.63Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
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BLAST of GR409162 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT2G03330.12.022e-1676.00| Symbols: | unknown protein; BEST Arabidopsis th... [more]
AT3G11810.11.311e-1576.00| Symbols: | unknown protein; BEST Arabidopsis th... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 2..15
score: NAcoord: 58..72
score
NoneNo IPR availableSEGsegsegcoord: 148..157
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR409162 ID=GR409162; Name=GR409162; organism=Cicer arietinum; type=EST; length=711bp
ATTGCAATATGTGCTGAGCAGCGATTTTATTTTCCTAAAGTTAAAAGGCA
CAGGCGAATTAATTTCACAAAACATGCTGCTTCATAATGAATAACAATAA
TAACCCCAAAATTTTGCACGATCTAACACTAACATGTTACTTTTTCATCC
ATCACATCATCATTTATACAAAATTTGGGAAATAGTGAGTACAGATATAT
ATATATATATATGTGTGTACGTTACATTACAGCCACTCACACATGAACGA
CAGACACAACATGAGGGACTTTGCTATCATCAAAAGGCAAGCTCACATAC
TGCCACGCAAACTCCTCCGCAATCTCCGATGCCAGCTCACCATGAACCGC
CTTACAGTACATATACAGCACGGTGTTTGCAGCGACGTTGTAAAGCATCA
AGATCGTGAGCACGGTGGAGCATTTTACGCCCTCTCTCACTCTCATCATC
AAGGAATGTAACATCACAAATCTCCACCGGTCCTTTGACAGTGCCGTTTC
ATACTTCTTTGCCATCTTCCTGCAAACCGCCCCAGTTGTTTCTTCCCTTT
TTGAATCACTTTCACAGCTTGACAGACACTCGTTTTCCCAAGAGACGGCC
CTCTGATAAACCCCGTCGAAAACGTGCCAGCTTGAGACCCTCTGGGCCAT
ATGCTTGGGTTCAACACACAACTGGGTGAAACCATACTTCCAAATAAGCC
TAATGAAAGGA
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