GR421058

EST Overview
NameGR421058
Unique NameGR421058
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length587
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR421058 vs. TrEMBL
Match: Q9SXW6_CICAR (Ring finger protein (Fragment) OS=Cicer arietinum PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.113e-13
Identity = 52/91 (57.14%), Postives = 53/91 (58.24%), Query Frame = -1
Query:  195 KGSPPTXXXXXXXXXXXXXXXXXX*GKD---AVCKDDCV*VMLEEKVRKLHIVTMEILLCILPWLSIRNTC--CRFELPLFTDDADYERSK 452
            KGSPPT                   GKD   AVCKD+   VMLEEKVRKL         CILPWLSIRNTC  CRFELP  TDDADYERSK
Sbjct:   46 KGSPPTAKSFVENLPLVELTEEELKGKDIVCAVCKDE---VMLEEKVRKLPCSHCYHGDCILPWLSIRNTCPVCRFELP--TDDADYERSK 131          
BLAST of GR421058 vs. TrEMBL
Match: Q9FWA5_ARATH (At3g02340 OS=Arabidopsis thaliana GN=At3g02340 PE=2 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.733e-7
Identity = 33/60 (55.00%), Postives = 41/60 (68.33%), Query Frame = -1
Query:  195 AVCKDDCV*VMLEEKVRKLHIVTMEILLCILPWLSIRNTC--CRFELPLFTDDADYERSK 368
            AVCKD+   +++EEKVR+L         CI+PWL IRNTC  CR+ELP  TDD +YER K
Sbjct:  336 AVCKDE---MLVEEKVRRLPCSHFYHGECIIPWLGIRNTCPVCRYELP--TDDLEYERHK 390          
BLAST of GR421058 vs. TrEMBL
Match: B9RLH2_RICCO (Zinc finger protein, putative OS=Ricinus communis GN=RCOM_1466950 PE=4 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 2.263e-7
Identity = 34/63 (53.97%), Postives = 41/63 (65.08%), Query Frame = -1
Query:  186 AVCKDDCV*VMLEEKVRKLHIVTMEILLCILPWLSIRNTC--CRFELPLFTDDADYERSKVAR 368
            AVCKD+   + + EK ++L         CILPWL IRNTC  CR+ELP  TDDADYER K A+
Sbjct:  413 AVCKDE---INVGEKAKQLPCTHRYHGDCILPWLGIRNTCPVCRYELP--TDDADYERRKAAQ 470          
BLAST of GR421058 vs. TrEMBL
Match: A5BBE0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017174 PE=4 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 2.263e-7
Identity = 34/63 (53.97%), Postives = 42/63 (66.67%), Query Frame = -1
Query:  186 AVCKDDCV*VMLEEKVRKLHIVTMEILLCILPWLSIRNTC--CRFELPLFTDDADYERSKVAR 368
            AVCKD+   ++LEEKV++L         CI+PWLSIRNTC  CR+ELP  TDD +YE  K  R
Sbjct:  248 AVCKDE---ILLEEKVKRLPCSHHYHGDCIVPWLSIRNTCPVCRYELP--TDDPEYEHMKSQR 305          
BLAST of GR421058 vs. TrEMBL
Match: B9I2V1_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_421964 PE=4 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 6.585e-7
Identity = 33/60 (55.00%), Postives = 40/60 (66.67%), Query Frame = -1
Query:  195 AVCKDDCV*VMLEEKVRKLHIVTMEILLCILPWLSIRNTC--CRFELPLFTDDADYERSK 368
            AVCKDD     + E+V++L  +      CI+PWL IRNTC  CR+ELP  TDDADYER K
Sbjct:   60 AVCKDD---TNVGERVKQLPCMHRYHGECIVPWLGIRNTCPVCRYELP--TDDADYERRK 114          
BLAST of GR421058 vs. TrEMBL
Match: B9IE23_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_251246 PE=4 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 8.600e-7
Identity = 32/60 (53.33%), Postives = 41/60 (68.33%), Query Frame = -1
Query:  195 AVCKDDCV*VMLEEKVRKLHIVTMEILLCILPWLSIRNTC--CRFELPLFTDDADYERSK 368
            AVCKDD   + + E+V++L  +      CI+PWL IRNTC  CR+ELP  TDDADYE+ K
Sbjct:   50 AVCKDD---INVGERVKQLPCLHRYHGECIVPWLGIRNTCPVCRYELP--TDDADYEQRK 104          
BLAST of GR421058 vs. TAIR peptide
Match: AT3G02340.1 (| Symbols: | RING/U-box superfamily protein | chr3:477032-478261 FORWARD LENGTH=409)

HSP 1 Score: 59.6918 bits (143), Expect = 1.327e-9
Identity = 33/60 (55.00%), Postives = 41/60 (68.33%), Query Frame = -1
Query:  195 AVCKDDCV*VMLEEKVRKLHIVTMEILLCILPWLSIRNTC--CRFELPLFTDDADYERSK 368
            AVCKD+   +++EEKVR+L         CI+PWL IRNTC  CR+ELP  TDD +YER K
Sbjct:  336 AVCKDE---MLVEEKVRRLPCSHFYHGECIIPWLGIRNTCPVCRYELP--TDDLEYERHK 390          
BLAST of GR421058 vs. TAIR peptide
Match: AT5G15820.1 (| Symbols: | RING/U-box superfamily protein | chr5:5161787-5162833 FORWARD LENGTH=348)

HSP 1 Score: 54.6842 bits (130), Expect = 4.269e-8
Identity = 31/62 (50.00%), Postives = 40/62 (64.52%), Query Frame = -1
Query:  189 AVCKDDCV*VMLEEKVRKLHIVTMEILLCILPWLSIRNTC--CRFELPLFTDDADYERSKVA 368
            A+CKD+   V+ +EKV++L         CI+PWL IRNTC  CR ELP  TDD +YER + A
Sbjct:  292 AICKDE---VVFKEKVKRLPCKHYYHGECIIPWLGIRNTCPVCRHELP--TDDLEYERKRRA 348          
The following BLAST results are available for this feature:
BLAST of GR421058 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 6
Match NameE-valueIdentityDescription
Q9SXW6_CICAR2.113e-1357.14Ring finger protein (Fragment) OS=Cicer arietinum ... [more]
Q9FWA5_ARATH1.733e-755.00At3g02340 OS=Arabidopsis thaliana GN=At3g02340 PE=... [more]
B9RLH2_RICCO2.263e-753.97Zinc finger protein, putative OS=Ricinus communis ... [more]
A5BBE0_VITVI2.263e-753.97Putative uncharacterized protein OS=Vitis vinifera... [more]
B9I2V1_POPTR6.585e-755.00Predicted protein (Fragment) OS=Populus trichocarp... [more]
B9IE23_POPTR8.600e-753.33Predicted protein (Fragment) OS=Populus trichocarp... [more]
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BLAST of GR421058 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT3G02340.11.327e-955.00| Symbols: | RING/U-box superfamily protein | chr... [more]
AT5G15820.14.269e-850.00| Symbols: | RING/U-box superfamily protein | chr... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 4..14
score
NoneNo IPR availableSEGsegsegcoord: 1..11
score: NAcoord: 25..34
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR421058 ID=GR421058; Name=GR421058; organism=Cicer arietinum; type=EST; length=587bp
GCTTAATATAAAATTCTAAATGAAAACTAATACCACCATAACATACAAAA
GATTTGTTCTCATCATCCTTCGAATAAACGAGACAACACCAACTGCTATT
TACATTTCTAAACTGAAGCAAATCAACAATAAGTATAACGTGAAAACTAA
ATTTACATTGAAAGCACTACGAATTCCCAAAGATCACGAGCCACCTTACT
CCGCTCGTAATCAGCATCATCCGTGAACAGGGGCAACTCAAACCGACAAC
ACGTGTTACGAATACTCAACCATGGCAAAATACAGAGCAAGATCTCCATG
GTAACAATGTGTAACTTCCTCACCTTCTCCTCCAACATCACCTACACACA
ATCATCTTTACAAACAGCATCCTTCCCTTAAACCACTCTTCAACTCCTCC
TCCAAACTCTTCGCCAATGGGAGATTCTCCACACCGTCGGTGGACTACCC
TTCTCAATTCCAGGAAAAGAACATTCTCAAGTAACTGTCATCGGTTGATC
TATCATATCCCGAACCGTTTATTTACAAATCAGCACTTGAACAGCTAAAA
TGTTCTCATCTTCCAACACCCCCATGTTCCAACTCTC
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